Click here to switch to the map view.

The map label for this gene is yqjF [H]

Identifier: 113476252

GI number: 113476252

Start: 4098615

End: 4099007

Strand: Reverse

Name: yqjF [H]

Synonym: Tery_2645

Alternate gene names: 113476252

Gene position: 4099007-4098615 (Counterclockwise)

Preceding gene: 113476258

Following gene: 113476251

Centisome position: 52.89

GC content: 31.55

Gene sequence:

>393_bases
ATGAAAAATTTACAGCCTTGGATTTCACTCTTAGCTAGAATATTTCTCTCTGCTGTTTTTCTCAAATCTGGTATTGGTAA
AATTTTTAGTGGAGCAAGTACTCAACAATATATGGAATCTTCAGGAGTTCCTGGTTGGTTATTAATTCCAACCATTATTG
TTCTTTTAGTAGGTGGATTATCTGTTTTATTGGGTTATAAAGCTCGTTATGGAGCACTTGCATTAGTAGGATTTTTAATT
CCAGCTACTCTAGTTTTTCATAATATTTTTATAGAGCCTGCTCAAGAAATTGCTTTTATGAAAAATCTGGGATTAATAGG
AGGACTTTTAATGGTAACTTCCTTTGGTCCTGGTAGCATTAGTTTTGATGAAAAAAGTATTGATTTTAATTAA

Upstream 100 bases:

>100_bases
AGGTTTGTTTAGATAATTTTAAATTAAAAAAATATTAAAAAAAAATTGGATGCTTTAACTAAAATGAGAAGATAAAAGAA
TATTTTTTTACTCAAACAAC

Downstream 100 bases:

>100_bases
AATACACTTAGTTTTAGGGAATAGGGGAGTGAAAGAATAGAGTGGCAAAGTGAGAAAGTGAGAGACTAGGGGAGTAGTAG
ACATACGGTATCATATCAGA

Product: DoxX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKNLQPWISLLARIFLSAVFLKSGIGKIFSGASTQQYMESSGVPGWLLIPTIIVLLVGGLSVLLGYKARYGALALVGFLI
PATLVFHNIFIEPAQEIAFMKNLGLIGGLLMVTSFGPGSISFDEKSIDFN

Sequences:

>Translated_130_residues
MKNLQPWISLLARIFLSAVFLKSGIGKIFSGASTQQYMESSGVPGWLLIPTIIVLLVGGLSVLLGYKARYGALALVGFLI
PATLVFHNIFIEPAQEIAFMKNLGLIGGLLMVTSFGPGSISFDEKSIDFN
>Mature_130_residues
MKNLQPWISLLARIFLSAVFLKSGIGKIFSGASTQQYMESSGVPGWLLIPTIIVLLVGGLSVLLGYKARYGALALVGFLI
PATLVFHNIFIEPAQEIAFMKNLGLIGGLLMVTSFGPGSISFDEKSIDFN

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI87082210, Length=124, Percent_Identity=41.9354838709677, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 13979; Mature: 13979

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLQPWISLLARIFLSAVFLKSGIGKIFSGASTQQYMESSGVPGWLLIPTIIVLLVGGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
SVLLGYKARYGALALVGFLIPATLVFHNIFIEPAQEIAFMKNLGLIGGLLMVTSFGPGSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SFDEKSIDFN
CCCCCCCCCC
>Mature Secondary Structure
MKNLQPWISLLARIFLSAVFLKSGIGKIFSGASTQQYMESSGVPGWLLIPTIIVLLVGGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
SVLLGYKARYGALALVGFLIPATLVFHNIFIEPAQEIAFMKNLGLIGGLLMVTSFGPGSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SFDEKSIDFN
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]