Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476244

Identifier: 113476244

GI number: 113476244

Start: 4087746

End: 4089296

Strand: Reverse

Name: 113476244

Synonym: Tery_2637

Alternate gene names: NA

Gene position: 4089296-4087746 (Counterclockwise)

Preceding gene: 113476245

Following gene: 113476243

Centisome position: 52.76

GC content: 31.14

Gene sequence:

>1551_bases
ATGAAAATTCTTAGATATAAAAAGTTTCAAAATTTAGGTTTAGCAGATTTCAAATTTTTATTTAACAGGCCAACACTACC
TTATTTAATTATTGCTTTTGGGGTAGCTATGAGGTTTATTCAATATTTATCTAATCGTTCTCTCTGGGCAGATGAAGCAG
TTTTAGCCTTAAATATTGTCAATCGTTCTTATTTAGAATTAATGCAACCTTTGGATTATGATCAAGGTGCGCCCATAGGT
TTTTTAATAGTAGAAAAATTAGCAGTTCAGATATTAGGTAATAATGAGTATTCCCTACGTTTTTTTCCTTTTATCTGTGG
TGTTTGCTCGTTGTTTTTATTCTATGAATTAGGCAAAAAATGGAGTTCTAAATCTGCTATTATTATTAGTTTGGCTTTAT
TTGCTAGCCTACAATATTTAGTGTATTACTCAGCAGAAGTCAAACAATATTCCAGTGATGTAGCGATCGCTCTGCTTTTA
TATGTACTATTAATACCTTTGCTACAACAAAAATTGCACCGGGTTCAGATAGTTAAATATTCTCTAGTGGGAGTAACTGC
TATTTGGTTTTCTCATCCTTCTATCTTTATTTTGGCAAGTTTTGGTAGTAGTGCTTTACTAATTAATTTTTGGCAGAAAG
AACTCAGTAAAATCAAACAGTTATTACTCATTTATTCAGCTTGGGTTTTAAGTTTTGCCATCTTTTATTTCCTATCTTTG
ATAAATTTAACGAGCAATGAAACTTTAACGACTTCTTGGGAGGATGGTTTCCCTACTTCCCCATTGGATATTATTTGGAT
GCTAGACGCTTTCGGTAAATTTTTCTATAAACCCTTAGGCTTTAGCAAATGGGTTGATGGATTAGCCATTGTCGCTTTTT
TAGTAGGTTGTATTTCCTGTTGGTTGAGCAGAAAAAAAATTTTGCTGCTCCTACTTTCTCCATTGTTGATGACTTTTTTA
GCATCCTTTTTACATCAATACCCATTTCGGAGTCGTTTGGTTCTATTTCTCACACCATTTGTAATTTTTCTCATAGCAGA
AGGCGGAAGTTATATTTTGACAAAATCTAAATTTAGACCAATTAAAATTATAACTATTTTCTTGATTATTTTATTACTCA
GACAACCTTTAGTAAAAGCCATTAAATTAATAGAAAAACCTCTCAATTTATCAGAAATAAAACCTGTGTTGAGCTATATC
AAAAAAAATCAACAACCAGGAGATATTTTGTATGTCTATCAACGAGGAATATATCAGTTTCAGTATTATGCAGAAAAATA
TGGTTATCAAGAAGGTGACTATATTATTGGTGTGGATGATTTAGATAAGTTTGATGGTCAAGAATTATCAATTACTGAGA
TGACAAGATATGAAAAAGACTTAGACAAACTGCGGGGGAATGAAAGAGTATGGTTATTATTTTCTCATACTCATATTCCA
GCAGAAAGAAGATTTTTAAACTATTATTTAAATGAAATTGGTCTCAGAATAGATACTTTTGAAAAACCTGGATCTTATGT
ATATTTATACGACATGAGTTACCGAAATTAG

Upstream 100 bases:

>100_bases
TTCAAAATTTAGGTTTAGCAGATTTCAAATTTTTATTTAACAGGCCAATACTACCTTATTTGATTAGGGTAATTTTTCTT
ATTTTTTGCTGGAGTTGAGG

Downstream 100 bases:

>100_bases
AATCAAGTCTTTCCTTATCTCTATGCATCAAAAATTTTTATCCTGCTGAGATAATTGAATAATTAATCTGTACATGTATG
AACAAATACATGTGGTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MKILRYKKFQNLGLADFKFLFNRPTLPYLIIAFGVAMRFIQYLSNRSLWADEAVLALNIVNRSYLELMQPLDYDQGAPIG
FLIVEKLAVQILGNNEYSLRFFPFICGVCSLFLFYELGKKWSSKSAIIISLALFASLQYLVYYSAEVKQYSSDVAIALLL
YVLLIPLLQQKLHRVQIVKYSLVGVTAIWFSHPSIFILASFGSSALLINFWQKELSKIKQLLLIYSAWVLSFAIFYFLSL
INLTSNETLTTSWEDGFPTSPLDIIWMLDAFGKFFYKPLGFSKWVDGLAIVAFLVGCISCWLSRKKILLLLLSPLLMTFL
ASFLHQYPFRSRLVLFLTPFVIFLIAEGGSYILTKSKFRPIKIITIFLIILLLRQPLVKAIKLIEKPLNLSEIKPVLSYI
KKNQQPGDILYVYQRGIYQFQYYAEKYGYQEGDYIIGVDDLDKFDGQELSITEMTRYEKDLDKLRGNERVWLLFSHTHIP
AERRFLNYYLNEIGLRIDTFEKPGSYVYLYDMSYRN

Sequences:

>Translated_516_residues
MKILRYKKFQNLGLADFKFLFNRPTLPYLIIAFGVAMRFIQYLSNRSLWADEAVLALNIVNRSYLELMQPLDYDQGAPIG
FLIVEKLAVQILGNNEYSLRFFPFICGVCSLFLFYELGKKWSSKSAIIISLALFASLQYLVYYSAEVKQYSSDVAIALLL
YVLLIPLLQQKLHRVQIVKYSLVGVTAIWFSHPSIFILASFGSSALLINFWQKELSKIKQLLLIYSAWVLSFAIFYFLSL
INLTSNETLTTSWEDGFPTSPLDIIWMLDAFGKFFYKPLGFSKWVDGLAIVAFLVGCISCWLSRKKILLLLLSPLLMTFL
ASFLHQYPFRSRLVLFLTPFVIFLIAEGGSYILTKSKFRPIKIITIFLIILLLRQPLVKAIKLIEKPLNLSEIKPVLSYI
KKNQQPGDILYVYQRGIYQFQYYAEKYGYQEGDYIIGVDDLDKFDGQELSITEMTRYEKDLDKLRGNERVWLLFSHTHIP
AERRFLNYYLNEIGLRIDTFEKPGSYVYLYDMSYRN
>Mature_516_residues
MKILRYKKFQNLGLADFKFLFNRPTLPYLIIAFGVAMRFIQYLSNRSLWADEAVLALNIVNRSYLELMQPLDYDQGAPIG
FLIVEKLAVQILGNNEYSLRFFPFICGVCSLFLFYELGKKWSSKSAIIISLALFASLQYLVYYSAEVKQYSSDVAIALLL
YVLLIPLLQQKLHRVQIVKYSLVGVTAIWFSHPSIFILASFGSSALLINFWQKELSKIKQLLLIYSAWVLSFAIFYFLSL
INLTSNETLTTSWEDGFPTSPLDIIWMLDAFGKFFYKPLGFSKWVDGLAIVAFLVGCISCWLSRKKILLLLLSPLLMTFL
ASFLHQYPFRSRLVLFLTPFVIFLIAEGGSYILTKSKFRPIKIITIFLIILLLRQPLVKAIKLIEKPLNLSEIKPVLSYI
KKNQQPGDILYVYQRGIYQFQYYAEKYGYQEGDYIIGVDDLDKFDGQELSITEMTRYEKDLDKLRGNERVWLLFSHTHIP
AERRFLNYYLNEIGLRIDTFEKPGSYVYLYDMSYRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59982; Mature: 59982

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILRYKKFQNLGLADFKFLFNRPTLPYLIIAFGVAMRFIQYLSNRSLWADEAVLALNIV
CCCCHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
NRSYLELMQPLDYDQGAPIGFLIVEKLAVQILGNNEYSLRFFPFICGVCSLFLFYELGKK
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHC
WSSKSAIIISLALFASLQYLVYYSAEVKQYSSDVAIALLLYVLLIPLLQQKLHRVQIVKY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLVGVTAIWFSHPSIFILASFGSSALLINFWQKELSKIKQLLLIYSAWVLSFAIFYFLSL
HHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INLTSNETLTTSWEDGFPTSPLDIIWMLDAFGKFFYKPLGFSKWVDGLAIVAFLVGCISC
HHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
WLSRKKILLLLLSPLLMTFLASFLHQYPFRSRLVLFLTPFVIFLIAEGGSYILTKSKFRP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
IKIITIFLIILLLRQPLVKAIKLIEKPLNLSEIKPVLSYIKKNQQPGDILYVYQRGIYQF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHCHHHH
QYYAEKYGYQEGDYIIGVDDLDKFDGQELSITEMTRYEKDLDKLRGNERVWLLFSHTHIP
HHHHHHCCCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
AERRFLNYYLNEIGLRIDTFEKPGSYVYLYDMSYRN
HHHHHHHHHHHHHCCEEECCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MKILRYKKFQNLGLADFKFLFNRPTLPYLIIAFGVAMRFIQYLSNRSLWADEAVLALNIV
CCCCHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
NRSYLELMQPLDYDQGAPIGFLIVEKLAVQILGNNEYSLRFFPFICGVCSLFLFYELGKK
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHC
WSSKSAIIISLALFASLQYLVYYSAEVKQYSSDVAIALLLYVLLIPLLQQKLHRVQIVKY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLVGVTAIWFSHPSIFILASFGSSALLINFWQKELSKIKQLLLIYSAWVLSFAIFYFLSL
HHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INLTSNETLTTSWEDGFPTSPLDIIWMLDAFGKFFYKPLGFSKWVDGLAIVAFLVGCISC
HHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
WLSRKKILLLLLSPLLMTFLASFLHQYPFRSRLVLFLTPFVIFLIAEGGSYILTKSKFRP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
IKIITIFLIILLLRQPLVKAIKLIEKPLNLSEIKPVLSYIKKNQQPGDILYVYQRGIYQF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHCHHHH
QYYAEKYGYQEGDYIIGVDDLDKFDGQELSITEMTRYEKDLDKLRGNERVWLLFSHTHIP
HHHHHHCCCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
AERRFLNYYLNEIGLRIDTFEKPGSYVYLYDMSYRN
HHHHHHHHHHHHHCCEEECCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA