Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476243

Identifier: 113476243

GI number: 113476243

Start: 4085844

End: 4087607

Strand: Reverse

Name: 113476243

Synonym: Tery_2636

Alternate gene names: NA

Gene position: 4087607-4085844 (Counterclockwise)

Preceding gene: 113476244

Following gene: 113476242

Centisome position: 52.74

GC content: 30.67

Gene sequence:

>1764_bases
ATGTATATTCAAAAGATTAAACAAATTTTAATCCCATCAAATTATCCAAAAAAATCGTCAACAATATTCTGGCTAATTCT
TAGTTTAACCTTCACAACAATCTATAGTTTACTAGTAATTAAAGAAGCTTTTAGAGGAGAATATATAGTACAAGATGATG
CCAGACAGCACGTTTTTTGGATGCGCCGTTTTTTAGATCCAGAATTATTTCCCAACGACTTAATTGCCGACTATTTTCAA
TCTGTTGCACCTTGGGGATATAAAACTTTTTATTGGCTATTTTCTCAAGTAGGAATAGATCCAATATTCCTAAATAAACT
CTTACCTTTAGGATTAAGTTTGGTAACTACTTTCTATTGTTTTGGTCTGTGTTTTCAGATATTGCCAATACCTTTTGCAG
GTTTTCTTGCCTCAGTATTATTAAGTCAAAATCTTTGGTTTCAAGATGACATCGCTTCCGGCACACCAAGAGCTTTTTTG
TATCCTTTATTTTTAGCAGTTTTATACTATTTATTGCGAAAATTATTACTTCCTTTTTTAGTAGCGATCGCTCTCCTCGG
ATTATTCTATCCACAATATGTTATCGTCACTGGATTAATTTTAATTATCAGAATTTTTAACTGGGAAAAGAGTCAGTTTT
ATCTGAGCAAAAATCCACAGCATTATCTATTTAGTGGAGTAGGTTTAGGAGTAAGCTTACTAGTAATTTTATTTTATGTT
TTAAATTCTAGTAATTATGCACCTATAATTACAGCATCCCAAGCCAAAATTTTGCCAGAATTTGGCGAAGCTGGTAGAAG
TGTTTTTTTCTCACAAAATTACTGGGATTTTTTCATCCTTGGCGGTCGTAGTGGTATTCTACCTAAACAATTATTTCTGC
CTCATATATTAATAGTTGGATTATTATTACCAATACTTTTGAAAAGCAAAGAAGGGAAAAATAATAATCTTGATCATGGA
ATAAATTTCCCCAGACAACTTCCCTTGCTAAAACAAATAAGTCCTAATATTAATTTATTATTTCAAATATTGTTAGCTGG
CGTCGCTTTATTTGTAATAGCTCATCTTTTATTATTCAAATTACATTTACCAAGTCGTTACACAAATCATAGTTTTCGGA
TAGTATTAGCCATAGGCACTGCCATTGTTTTATGTATAATTTTAGATAGATTTTTTTACTGGATAAATCAACAGTTATCC
TGCCCAAAAAGAAAAATTTTAGGATTAATAATAATTGGGATTTTGGGGATTTTATTAATAAGTAATATGAGCTTATGGAA
AAAAATTTCTTACCCTGATTATCAAAAAGGTAAATCCCCAGAAATTTATCAGTTTTTTGCTCAAAAACCAAAAGATATTT
TGATTGCTTCTCTGTCAGAAGAGGCAAATTATATTCCTACATTTTCTCAACGTTCCGTATTATTTGCCTGGGAATATGCT
ATTCCCTATCATCTTAGTTATTACAGTCAAATAAAACAACGAGCTACAGAATTTGTTTGGGCTCAGTATCATTCAGATAT
TCAGTGGATGAAGAATTTTATTAATACTTATAGAATTGATTTCTTAATCTTAGACCGAGAAGCATTTATGCCAGAATATG
TAATAAAAAATCGTTGGTTGAGGCAGTGGTATTATCAAATGGGAAATCAAATTGAAATTAATCTCCAAAATGGAAAGACT
CCTGCCATAGTTGACACTATAGATAAATGTTCAGTTTTAGAAACAGAAAAATTATGGGTTTTGGAAGCTAAATGTATTGA
ATAA

Upstream 100 bases:

>100_bases
TATCCTGCTGAGATAATTGAATAATTAATCTGTACATGTATGAACAAATACATGTGGTAATTTTAGTCTTTATCAAGAGC
AGGAATGAGTAATAAAAATT

Downstream 100 bases:

>100_bases
GGAAAAAGGAAAAAGGAAGAAGGAAAAGTATAGTAAATAAAGTCTGATGTATGTCAAGCTTTTAACTTTGAGACAATAGA
ATACTTCAACTGATAATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MYIQKIKQILIPSNYPKKSSTIFWLILSLTFTTIYSLLVIKEAFRGEYIVQDDARQHVFWMRRFLDPELFPNDLIADYFQ
SVAPWGYKTFYWLFSQVGIDPIFLNKLLPLGLSLVTTFYCFGLCFQILPIPFAGFLASVLLSQNLWFQDDIASGTPRAFL
YPLFLAVLYYLLRKLLLPFLVAIALLGLFYPQYVIVTGLILIIRIFNWEKSQFYLSKNPQHYLFSGVGLGVSLLVILFYV
LNSSNYAPIITASQAKILPEFGEAGRSVFFSQNYWDFFILGGRSGILPKQLFLPHILIVGLLLPILLKSKEGKNNNLDHG
INFPRQLPLLKQISPNINLLFQILLAGVALFVIAHLLLFKLHLPSRYTNHSFRIVLAIGTAIVLCIILDRFFYWINQQLS
CPKRKILGLIIIGILGILLISNMSLWKKISYPDYQKGKSPEIYQFFAQKPKDILIASLSEEANYIPTFSQRSVLFAWEYA
IPYHLSYYSQIKQRATEFVWAQYHSDIQWMKNFINTYRIDFLILDREAFMPEYVIKNRWLRQWYYQMGNQIEINLQNGKT
PAIVDTIDKCSVLETEKLWVLEAKCIE

Sequences:

>Translated_587_residues
MYIQKIKQILIPSNYPKKSSTIFWLILSLTFTTIYSLLVIKEAFRGEYIVQDDARQHVFWMRRFLDPELFPNDLIADYFQ
SVAPWGYKTFYWLFSQVGIDPIFLNKLLPLGLSLVTTFYCFGLCFQILPIPFAGFLASVLLSQNLWFQDDIASGTPRAFL
YPLFLAVLYYLLRKLLLPFLVAIALLGLFYPQYVIVTGLILIIRIFNWEKSQFYLSKNPQHYLFSGVGLGVSLLVILFYV
LNSSNYAPIITASQAKILPEFGEAGRSVFFSQNYWDFFILGGRSGILPKQLFLPHILIVGLLLPILLKSKEGKNNNLDHG
INFPRQLPLLKQISPNINLLFQILLAGVALFVIAHLLLFKLHLPSRYTNHSFRIVLAIGTAIVLCIILDRFFYWINQQLS
CPKRKILGLIIIGILGILLISNMSLWKKISYPDYQKGKSPEIYQFFAQKPKDILIASLSEEANYIPTFSQRSVLFAWEYA
IPYHLSYYSQIKQRATEFVWAQYHSDIQWMKNFINTYRIDFLILDREAFMPEYVIKNRWLRQWYYQMGNQIEINLQNGKT
PAIVDTIDKCSVLETEKLWVLEAKCIE
>Mature_587_residues
MYIQKIKQILIPSNYPKKSSTIFWLILSLTFTTIYSLLVIKEAFRGEYIVQDDARQHVFWMRRFLDPELFPNDLIADYFQ
SVAPWGYKTFYWLFSQVGIDPIFLNKLLPLGLSLVTTFYCFGLCFQILPIPFAGFLASVLLSQNLWFQDDIASGTPRAFL
YPLFLAVLYYLLRKLLLPFLVAIALLGLFYPQYVIVTGLILIIRIFNWEKSQFYLSKNPQHYLFSGVGLGVSLLVILFYV
LNSSNYAPIITASQAKILPEFGEAGRSVFFSQNYWDFFILGGRSGILPKQLFLPHILIVGLLLPILLKSKEGKNNNLDHG
INFPRQLPLLKQISPNINLLFQILLAGVALFVIAHLLLFKLHLPSRYTNHSFRIVLAIGTAIVLCIILDRFFYWINQQLS
CPKRKILGLIIIGILGILLISNMSLWKKISYPDYQKGKSPEIYQFFAQKPKDILIASLSEEANYIPTFSQRSVLFAWEYA
IPYHLSYYSQIKQRATEFVWAQYHSDIQWMKNFINTYRIDFLILDREAFMPEYVIKNRWLRQWYYQMGNQIEINLQNGKT
PAIVDTIDKCSVLETEKLWVLEAKCIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68249; Mature: 68249

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEECCCCC
>Mature Secondary Structure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HHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA