Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476242

Identifier: 113476242

GI number: 113476242

Start: 4084112

End: 4085647

Strand: Reverse

Name: 113476242

Synonym: Tery_2635

Alternate gene names: NA

Gene position: 4085647-4084112 (Counterclockwise)

Preceding gene: 113476243

Following gene: 113476241

Centisome position: 52.72

GC content: 30.08

Gene sequence:

>1536_bases
ATGAAGCAAATACTCAAAAAAAAAATTATTATTTTCGTCTGGAAAATTTTTATCTTAGGCTTAATTTTTGGAATTTCCTA
TACCCAATATCCCCTATATACCTCAAACCAACATACTAAATTTTTACAAGGATTAGCCAAAGCTGGTAATGGTTATTTAA
ACAAAGATTGGTTAGCCAATACATTAGACCCTCTACCTGCTTTTACTTTTTTAGTGAAAATCACTTCTACCTACTTCCAT
GAAAATTTTTTCTACTTTTATTACATTCTAATTTTTGGCATCTATATTTATAGTATCCTTGGCATTGCCTCAGTAATTTT
TAAAATTAATAGTTCGCGAATAAAGCTCCTAATTTATTTCCTCCTGATCCTGACTATTCACTGTCTAAAAATCCGAATTT
TTGACTTTAAAACTCATGTACACCTCCACTATGGTTTAGCAGACCAATACATTCTCGGTGGATATTTTCAACCCTGTACA
TTTGGAGTATTAATTATCTTTTCTATCTATACCTTTCTAAGAAAAAAACCTTTTTTAGCAGTCTTAGCTTTAGGGATAGC
TGCAACTTTTCATCCCACATATCTTCCTAGTACCGCTTTACTGACTTTAGCTTACATGATCACAACTTATAAAAATGAAA
AAAATCTCCAAAAATCATTATTAATAGGTACATTTTCATTCATCTTAGTTTTACCAGTAGTCAGTTATATGACTATTACT
TTTCAACCTACATCTCCCGAACTTTTTCAAATATCTGAAAGCTTGCTTGTTAATAGAATTCCTCATCATTCCTTCCCCGA
TATTTGGTTGACTGAACCCGCTGCTCCAACTCAAATTTTAGTAGTAGCGATCGCTCTCTATCTTTTGTACAAAACCAGAC
TATTTTTTATCTTATTTTTTCCTTTTGCCACCGCAACTATTCTGACAATAACTCAAGTTTTTTCTAGTAGTAATACTTTA
GCATTTCTTACCCCATGGCGCATCTCTGCTTTTTTGGTTCCTCTTTCTACTTGTATGATATTGGCTAATATTATTACTAT
TATTTTTAATAAGTATCATTCTCAAATTCAGCAACACAAAAAAACCATAGAAATTTTCTCTGTCGTAGCAATATATCTGT
TCATTCTTTCAGGGCTGGGAATGCAATTAGAAAAATTAACTATTAATCAGAAAGATACACCAATTATTATGGAATATGTC
AAAGAAAATAAACAACCAGACGATATTTATTTAGTTCCTATAACTTCAGGTAAATTTGTTAACTTTAGAATTGCCACAGG
TGCACCAATTTTAATTAATCTCAAGTCTCATCCCTATAAAGATATAGAAGTTATTGAATGGCACAACAGATTATTAATGG
CACAACAATTTTATGATAATTCTGGTATAGCTCAATGTCAGGCTTTACAGAACTTAATTGATAAATATAGAATAAATTAT
GTCATTATTGAAAATGAAAACTCTCTTAACTGTCTAAAAATAGAAAAAACTTATATGGATAATTTATATCAAATGTATAA
AGTAACTGATAAATAA

Upstream 100 bases:

>100_bases
TCAATAATTAATTTAGATTTTTTTTCATATTTTTTCTCTATTATTAACTTTTTTATCCATTAATTGTAACTTCTAGATAA
TGGTATTAGTAACTTAAAAA

Downstream 100 bases:

>100_bases
CCTCTTGCTTAAAACCACTTTTAACTTCCTTATCTGTGCATCCGTTGGAAAATTATTGTGGTGCATTCCTACTCAAATTT
AATTAAAAAATGTTCCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MKQILKKKIIIFVWKIFILGLIFGISYTQYPLYTSNQHTKFLQGLAKAGNGYLNKDWLANTLDPLPAFTFLVKITSTYFH
ENFFYFYYILIFGIYIYSILGIASVIFKINSSRIKLLIYFLLILTIHCLKIRIFDFKTHVHLHYGLADQYILGGYFQPCT
FGVLIIFSIYTFLRKKPFLAVLALGIAATFHPTYLPSTALLTLAYMITTYKNEKNLQKSLLIGTFSFILVLPVVSYMTIT
FQPTSPELFQISESLLVNRIPHHSFPDIWLTEPAAPTQILVVAIALYLLYKTRLFFILFFPFATATILTITQVFSSSNTL
AFLTPWRISAFLVPLSTCMILANIITIIFNKYHSQIQQHKKTIEIFSVVAIYLFILSGLGMQLEKLTINQKDTPIIMEYV
KENKQPDDIYLVPITSGKFVNFRIATGAPILINLKSHPYKDIEVIEWHNRLLMAQQFYDNSGIAQCQALQNLIDKYRINY
VIIENENSLNCLKIEKTYMDNLYQMYKVTDK

Sequences:

>Translated_511_residues
MKQILKKKIIIFVWKIFILGLIFGISYTQYPLYTSNQHTKFLQGLAKAGNGYLNKDWLANTLDPLPAFTFLVKITSTYFH
ENFFYFYYILIFGIYIYSILGIASVIFKINSSRIKLLIYFLLILTIHCLKIRIFDFKTHVHLHYGLADQYILGGYFQPCT
FGVLIIFSIYTFLRKKPFLAVLALGIAATFHPTYLPSTALLTLAYMITTYKNEKNLQKSLLIGTFSFILVLPVVSYMTIT
FQPTSPELFQISESLLVNRIPHHSFPDIWLTEPAAPTQILVVAIALYLLYKTRLFFILFFPFATATILTITQVFSSSNTL
AFLTPWRISAFLVPLSTCMILANIITIIFNKYHSQIQQHKKTIEIFSVVAIYLFILSGLGMQLEKLTINQKDTPIIMEYV
KENKQPDDIYLVPITSGKFVNFRIATGAPILINLKSHPYKDIEVIEWHNRLLMAQQFYDNSGIAQCQALQNLIDKYRINY
VIIENENSLNCLKIEKTYMDNLYQMYKVTDK
>Mature_511_residues
MKQILKKKIIIFVWKIFILGLIFGISYTQYPLYTSNQHTKFLQGLAKAGNGYLNKDWLANTLDPLPAFTFLVKITSTYFH
ENFFYFYYILIFGIYIYSILGIASVIFKINSSRIKLLIYFLLILTIHCLKIRIFDFKTHVHLHYGLADQYILGGYFQPCT
FGVLIIFSIYTFLRKKPFLAVLALGIAATFHPTYLPSTALLTLAYMITTYKNEKNLQKSLLIGTFSFILVLPVVSYMTIT
FQPTSPELFQISESLLVNRIPHHSFPDIWLTEPAAPTQILVVAIALYLLYKTRLFFILFFPFATATILTITQVFSSSNTL
AFLTPWRISAFLVPLSTCMILANIITIIFNKYHSQIQQHKKTIEIFSVVAIYLFILSGLGMQLEKLTINQKDTPIIMEYV
KENKQPDDIYLVPITSGKFVNFRIATGAPILINLKSHPYKDIEVIEWHNRLLMAQQFYDNSGIAQCQALQNLIDKYRINY
VIIENENSLNCLKIEKTYMDNLYQMYKVTDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59099; Mature: 59099

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQILKKKIIIFVWKIFILGLIFGISYTQYPLYTSNQHTKFLQGLAKAGNGYLNKDWLAN
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCHHHH
TLDPLPAFTFLVKITSTYFHENFFYFYYILIFGIYIYSILGIASVIFKINSSRIKLLIYF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LLILTIHCLKIRIFDFKTHVHLHYGLADQYILGGYFQPCTFGVLIIFSIYTFLRKKPFLA
HHHHHHHHHHEEEEEEEEEEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHH
VLALGIAATFHPTYLPSTALLTLAYMITTYKNEKNLQKSLLIGTFSFILVLPVVSYMTIT
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEE
FQPTSPELFQISESLLVNRIPHHSFPDIWLTEPAAPTQILVVAIALYLLYKTRLFFILFF
ECCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PFATATILTITQVFSSSNTLAFLTPWRISAFLVPLSTCMILANIITIIFNKYHSQIQQHK
HHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTIEIFSVVAIYLFILSGLGMQLEKLTINQKDTPIIMEYVKENKQPDDIYLVPITSGKFV
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCCCEE
NFRIATGAPILINLKSHPYKDIEVIEWHNRLLMAQQFYDNSGIAQCQALQNLIDKYRINY
EEEEECCCEEEEEECCCCCCCCHHEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCE
VIIENENSLNCLKIEKTYMDNLYQMYKVTDK
EEEECCCCCEEEEEHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKQILKKKIIIFVWKIFILGLIFGISYTQYPLYTSNQHTKFLQGLAKAGNGYLNKDWLAN
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCHHHH
TLDPLPAFTFLVKITSTYFHENFFYFYYILIFGIYIYSILGIASVIFKINSSRIKLLIYF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LLILTIHCLKIRIFDFKTHVHLHYGLADQYILGGYFQPCTFGVLIIFSIYTFLRKKPFLA
HHHHHHHHHHEEEEEEEEEEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHH
VLALGIAATFHPTYLPSTALLTLAYMITTYKNEKNLQKSLLIGTFSFILVLPVVSYMTIT
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEE
FQPTSPELFQISESLLVNRIPHHSFPDIWLTEPAAPTQILVVAIALYLLYKTRLFFILFF
ECCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PFATATILTITQVFSSSNTLAFLTPWRISAFLVPLSTCMILANIITIIFNKYHSQIQQHK
HHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTIEIFSVVAIYLFILSGLGMQLEKLTINQKDTPIIMEYVKENKQPDDIYLVPITSGKFV
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCCCEE
NFRIATGAPILINLKSHPYKDIEVIEWHNRLLMAQQFYDNSGIAQCQALQNLIDKYRINY
EEEEECCCEEEEEECCCCCCCCHHEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCE
VIIENENSLNCLKIEKTYMDNLYQMYKVTDK
EEEECCCCCEEEEEHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA