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The map label for this gene is 113476172

Identifier: 113476172

GI number: 113476172

Start: 3956896

End: 3957825

Strand: Reverse

Name: 113476172

Synonym: Tery_2560

Alternate gene names: NA

Gene position: 3957825-3956896 (Counterclockwise)

Preceding gene: 113476173

Following gene: 113476170

Centisome position: 51.07

GC content: 32.8

Gene sequence:

>930_bases
ATGAGTGGCTTATATCGATTTTTATTCAGCATTATTATTGTTGTTACAGTCTTATTTTTGTCATTCTCTCCACCGATGAA
AATTGCAACTGCTAACTTAAAGATTGGAAATGCTAAAAAGGTCTTTACTGAAGGAATTACTAATTCAGAAAACAAAAACT
ATGAGCAAGCAGTTGAAAATTTTACTAAAGCCATAGAATTGAAATTTAAGTTTGCTAGTGCTTATAGTAATAGATGTTTA
GTTTATCTTCAATGGGGAAAATATGAGGAAGCGATCGCTGACTGTACCGAAGCCATAAAAATTAATCCAAAAAATATAGA
AGCAAATCTCAACCTAGGTTTAGCTTATGACAAAATTGGTAATTACCAACAGGCTATTGCAGAATATAATCAGGTCCTTA
ATCATCAGCATAATGATTTTCGTGCTTTATATAATCGTGGGTTGGCTAATTTTGAACTAAAGAATTATCACGAAGCCATA
GAAAACTATAACTTAATTCTAACAAATATTCAGCAGGATGCTAGCCTTAATCAAGGAGATATTTATAATGAAAGGGGTTT
GGCATATTTAATGTCAAAAAATACCCACAAAGCTATGGCAGATTTTAATTATGCTATTTATATAGATGCTGATAATTCTA
GAGCTTATTATAACAGAGGTTGTGTCTGTAGGAAGATGGGAAATATTGAAGGAGCAATGGCAGATTTTAGTAAAAGTCTA
CAAATTAATCCCTATGAAGCTCAAGCATATTTAAACCGAGGGTTATTGCTTGAAGAAGGTGGACTTTATGAAGCAGCAAT
TCAAGATTTGCAAGCCGCTGCAAAGTGTTTTTGTGATCAAGGCAATATGGCAGCTTATAACTACACTCAAGGGTTAATTG
ATGGGTTACAAAAATGGCTGTTATTATCTAATCAAACTGCTATTGGCTAA

Upstream 100 bases:

>100_bases
AATAGTAGGGGTGAAAATTAGAGCAAAAGGAAATACTAAATCTATAGCTCTATGTATTCGCCCCAATATTGGCATCTTAA
GTAAATACATACGGTGACAA

Downstream 100 bases:

>100_bases
AAAAATCTACAGGAAAAGATAGGTTCATTACACTAAGAGAAACAATTACAGAGGAGTTAGAGCAAGTTAAGATAGCTCAA
AGTAAGGATTTTTCGGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSGLYRFLFSIIIVVTVLFLSFSPPMKIATANLKIGNAKKVFTEGITNSENKNYEQAVENFTKAIELKFKFASAYSNRCL
VYLQWGKYEEAIADCTEAIKINPKNIEANLNLGLAYDKIGNYQQAIAEYNQVLNHQHNDFRALYNRGLANFELKNYHEAI
ENYNLILTNIQQDASLNQGDIYNERGLAYLMSKNTHKAMADFNYAIYIDADNSRAYYNRGCVCRKMGNIEGAMADFSKSL
QINPYEAQAYLNRGLLLEEGGLYEAAIQDLQAAAKCFCDQGNMAAYNYTQGLIDGLQKWLLLSNQTAIG

Sequences:

>Translated_309_residues
MSGLYRFLFSIIIVVTVLFLSFSPPMKIATANLKIGNAKKVFTEGITNSENKNYEQAVENFTKAIELKFKFASAYSNRCL
VYLQWGKYEEAIADCTEAIKINPKNIEANLNLGLAYDKIGNYQQAIAEYNQVLNHQHNDFRALYNRGLANFELKNYHEAI
ENYNLILTNIQQDASLNQGDIYNERGLAYLMSKNTHKAMADFNYAIYIDADNSRAYYNRGCVCRKMGNIEGAMADFSKSL
QINPYEAQAYLNRGLLLEEGGLYEAAIQDLQAAAKCFCDQGNMAAYNYTQGLIDGLQKWLLLSNQTAIG
>Mature_308_residues
SGLYRFLFSIIIVVTVLFLSFSPPMKIATANLKIGNAKKVFTEGITNSENKNYEQAVENFTKAIELKFKFASAYSNRCLV
YLQWGKYEEAIADCTEAIKINPKNIEANLNLGLAYDKIGNYQQAIAEYNQVLNHQHNDFRALYNRGLANFELKNYHEAIE
NYNLILTNIQQDASLNQGDIYNERGLAYLMSKNTHKAMADFNYAIYIDADNSRAYYNRGCVCRKMGNIEGAMADFSKSLQ
INPYEAQAYLNRGLLLEEGGLYEAAIQDLQAAAKCFCDQGNMAAYNYTQGLIDGLQKWLLLSNQTAIG

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI310131789, Length=220, Percent_Identity=25.4545454545455, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI310110582, Length=220, Percent_Identity=25.4545454545455, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI310123097, Length=220, Percent_Identity=25.4545454545455, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 34903; Mature: 34772

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLYRFLFSIIIVVTVLFLSFSPPMKIATANLKIGNAKKVFTEGITNSENKNYEQAVEN
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHCCCCCCCCCHHHHHHH
FTKAIELKFKFASAYSNRCLVYLQWGKYEEAIADCTEAIKINPKNIEANLNLGLAYDKIG
HHHHHHEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHEECCCCCEEEEEEEEEEHHHHC
NYQQAIAEYNQVLNHQHNDFRALYNRGLANFELKNYHEAIENYNLILTNIQQDASLNQGD
CHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCC
IYNERGLAYLMSKNTHKAMADFNYAIYIDADNSRAYYNRGCVCRKMGNIEGAMADFSKSL
CCCCCCEEEEECCCCHHHHHCCCEEEEEECCCCCEECCCCCHHHHHCCCCHHHHHHHCCC
QINPYEAQAYLNRGLLLEEGGLYEAAIQDLQAAAKCFCDQGNMAAYNYTQGLIDGLQKWL
CCCCHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH
LLSNQTAIG
HHCCCCCCC
>Mature Secondary Structure 
SGLYRFLFSIIIVVTVLFLSFSPPMKIATANLKIGNAKKVFTEGITNSENKNYEQAVEN
CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHCCCCCCCCCHHHHHHH
FTKAIELKFKFASAYSNRCLVYLQWGKYEEAIADCTEAIKINPKNIEANLNLGLAYDKIG
HHHHHHEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHEECCCCCEEEEEEEEEEHHHHC
NYQQAIAEYNQVLNHQHNDFRALYNRGLANFELKNYHEAIENYNLILTNIQQDASLNQGD
CHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCC
IYNERGLAYLMSKNTHKAMADFNYAIYIDADNSRAYYNRGCVCRKMGNIEGAMADFSKSL
CCCCCCEEEEECCCCHHHHHCCCEEEEEECCCCCEECCCCCHHHHHCCCCHHHHHHHCCC
QINPYEAQAYLNRGLLLEEGGLYEAAIQDLQAAAKCFCDQGNMAAYNYTQGLIDGLQKWL
CCCCHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH
LLSNQTAIG
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]