Click here to switch to the map view.

The map label for this gene is yebA [C]

Identifier: 113476170

GI number: 113476170

Start: 3953889

End: 3954944

Strand: Reverse

Name: yebA [C]

Synonym: Tery_2558

Alternate gene names: 113476170

Gene position: 3954944-3953889 (Counterclockwise)

Preceding gene: 113476172

Following gene: 113476169

Centisome position: 51.03

GC content: 37.78

Gene sequence:

>1056_bases
ATGAAACTGAAAAATTATTTTTATGGTTTTGTTACTGCATTAGTAATAGCATTAGTAACTAACTACCTGCTAAGTGCTAA
TGCTCATACCCGACTATTTCAAAATTCTGTCTTTGAAAATTCTATTGCTCAGGTATCAAATAATCCAAAATTTGCTCTAC
CTATTGAATGTAAGCTTGACAAAGACTGCTTTATTCTGTTGTATAGCGATCGCGATCCTAGTCCGAAAGAACTAGATTTT
GGTTGTGGCAGGCAAACTTACGATGGTCACAAAGGAACAGATTTTGCTATACCTGATGAAAAAATTATGGCACAAGGTGT
AGCTGTGACAGCTGTGGCGCCTGGTAAAGTGCTACGAACCAGAGACGGAATACCAGATCGCCGAATAATAGATACAGCAG
ATCGGGATGCGGTTAAGAATATTGAATGTGGAAATGGAATAGTCATAGATCATGGTAATGGTTGGGAAGCTCAATACTGT
CATCTCCGTAATGGTAGTGTTGTTGTGAAACCAGGAACGGTTGTCAAAGCAGGTACTCAACTGGGAATAGTAGGAACATC
TGGTTTATCTTCTTTTCCTCATGTTCATTTAAGTGTTCGATATCAAGGAGAAATTGTAGATCCATTTGTTGGAGTGAATG
TTAAGAGTGGTTGTAATGTTCCTCGTAATTCAATTTGGGAAGAACCGTTGAGTTATAAACCAACTGGAATTATTAGAAGT
GGGTTTGCTACTGTTGCGCCAACTATGGATGATTTGTGGTCTGGCAAATTTTACGATACTGTTTTAGCAGGAAATAGTGC
GGCATTAATATTTTGGGTACAAATTTATGGGGTTTTGCCTGGGGATAAAGAACATTATCAATTATTTGCTCCTAATGGTG
AGGGGGTTATAGACAATAAAAAGGAAATGAAATCTGCTCACAAGACATGGATGGGGTATGTGGGTAAACGCAATAATTCT
CAGTCCCTTCCTATAGGTAAATGGAGAGGTGAGTATAGTTTGACTAGAGGTGACCAAGTATTAGTAAATATTACAAAAGA
GGTTCAATTAAATTGA

Upstream 100 bases:

>100_bases
TTATAAGTTTGAAAAAAGCTTTGAATTACTAGATTTTTCTAAGTATTGAGATAATTTATGAAAATAACTAATATTAGAAA
TATTTATTAACTAGATACTG

Downstream 100 bases:

>100_bases
AAAAAGGGCGTTGGTAAATGAAGGTATGATTAAGAAAGTATGCGATCGCTAAACCGCTACTTTTTTTTTTGAGTTAATGG
TACGGGAACATCTCTGAATT

Product: peptidase M23B

Products: NA

Alternate protein names: Peptidase M; Periplasmic Protein; M23 Family Peptidase; M23 Peptidase Domain Protein; M24/M37 Family Peptidase

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MKLKNYFYGFVTALVIALVTNYLLSANAHTRLFQNSVFENSIAQVSNNPKFALPIECKLDKDCFILLYSDRDPSPKELDF
GCGRQTYDGHKGTDFAIPDEKIMAQGVAVTAVAPGKVLRTRDGIPDRRIIDTADRDAVKNIECGNGIVIDHGNGWEAQYC
HLRNGSVVVKPGTVVKAGTQLGIVGTSGLSSFPHVHLSVRYQGEIVDPFVGVNVKSGCNVPRNSIWEEPLSYKPTGIIRS
GFATVAPTMDDLWSGKFYDTVLAGNSAALIFWVQIYGVLPGDKEHYQLFAPNGEGVIDNKKEMKSAHKTWMGYVGKRNNS
QSLPIGKWRGEYSLTRGDQVLVNITKEVQLN

Sequences:

>Translated_351_residues
MKLKNYFYGFVTALVIALVTNYLLSANAHTRLFQNSVFENSIAQVSNNPKFALPIECKLDKDCFILLYSDRDPSPKELDF
GCGRQTYDGHKGTDFAIPDEKIMAQGVAVTAVAPGKVLRTRDGIPDRRIIDTADRDAVKNIECGNGIVIDHGNGWEAQYC
HLRNGSVVVKPGTVVKAGTQLGIVGTSGLSSFPHVHLSVRYQGEIVDPFVGVNVKSGCNVPRNSIWEEPLSYKPTGIIRS
GFATVAPTMDDLWSGKFYDTVLAGNSAALIFWVQIYGVLPGDKEHYQLFAPNGEGVIDNKKEMKSAHKTWMGYVGKRNNS
QSLPIGKWRGEYSLTRGDQVLVNITKEVQLN
>Mature_351_residues
MKLKNYFYGFVTALVIALVTNYLLSANAHTRLFQNSVFENSIAQVSNNPKFALPIECKLDKDCFILLYSDRDPSPKELDF
GCGRQTYDGHKGTDFAIPDEKIMAQGVAVTAVAPGKVLRTRDGIPDRRIIDTADRDAVKNIECGNGIVIDHGNGWEAQYC
HLRNGSVVVKPGTVVKAGTQLGIVGTSGLSSFPHVHLSVRYQGEIVDPFVGVNVKSGCNVPRNSIWEEPLSYKPTGIIRS
GFATVAPTMDDLWSGKFYDTVLAGNSAALIFWVQIYGVLPGDKEHYQLFAPNGEGVIDNKKEMKSAHKTWMGYVGKRNNS
QSLPIGKWRGEYSLTRGDQVLVNITKEVQLN

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 38644; Mature: 38644

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKNYFYGFVTALVIALVTNYLLSANAHTRLFQNSVFENSIAQVSNNPKFALPIECKLD
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
KDCFILLYSDRDPSPKELDFGCGRQTYDGHKGTDFAIPDEKIMAQGVAVTAVAPGKVLRT
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCEEEC
RDGIPDRRIIDTADRDAVKNIECGNGIVIDHGNGWEAQYCHLRNGSVVVKPGTVVKAGTQ
CCCCCCCCEECCCCCHHHCCCCCCCCEEEECCCCCCEEEEEECCCEEEECCCCEEECCCE
LGIVGTSGLSSFPHVHLSVRYQGEIVDPFVGVNVKSGCNVPRNSIWEEPLSYKPTGIIRS
EEEEECCCCCCCCEEEEEEEECCEEECCEECCEECCCCCCCCHHHHCCCCCCCCCCCEEC
GFATVAPTMDDLWSGKFYDTVLAGNSAALIFWVQIYGVLPGDKEHYQLFAPNGEGVIDNK
CCEEECCCHHHHHCCCEEEEEEECCCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCH
KEMKSAHKTWMGYVGKRNNSQSLPIGKWRGEYSLTRGDQVLVNITKEVQLN
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEECC
>Mature Secondary Structure
MKLKNYFYGFVTALVIALVTNYLLSANAHTRLFQNSVFENSIAQVSNNPKFALPIECKLD
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
KDCFILLYSDRDPSPKELDFGCGRQTYDGHKGTDFAIPDEKIMAQGVAVTAVAPGKVLRT
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCEEEC
RDGIPDRRIIDTADRDAVKNIECGNGIVIDHGNGWEAQYCHLRNGSVVVKPGTVVKAGTQ
CCCCCCCCEECCCCCHHHCCCCCCCCEEEECCCCCCEEEEEECCCEEEECCCCEEECCCE
LGIVGTSGLSSFPHVHLSVRYQGEIVDPFVGVNVKSGCNVPRNSIWEEPLSYKPTGIIRS
EEEEECCCCCCCCEEEEEEEECCEEECCEECCEECCCCCCCCHHHHCCCCCCCCCCCEEC
GFATVAPTMDDLWSGKFYDTVLAGNSAALIFWVQIYGVLPGDKEHYQLFAPNGEGVIDNK
CCEEECCCHHHHHCCCEEEEEEECCCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCH
KEMKSAHKTWMGYVGKRNNSQSLPIGKWRGEYSLTRGDQVLVNITKEVQLN
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA