Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476138

Identifier: 113476138

GI number: 113476138

Start: 3887494

End: 3888420

Strand: Reverse

Name: 113476138

Synonym: Tery_2520

Alternate gene names: NA

Gene position: 3888420-3887494 (Counterclockwise)

Preceding gene: 113476139

Following gene: 113476137

Centisome position: 50.17

GC content: 31.82

Gene sequence:

>927_bases
ATGAGTCGTGGCATATATATTACTGCAAATGACAAAGCCCTCGAACAGGGTATTGCCCTATTAAATAGCATCCGTAAATA
TGATAGGGATACACCAATTATTTTGATTCCCTATGATGATAATTATCAAATAGTCGCAGAACTTTTTTCAAAAGATTATG
GAGTTACAATTTATCAAGATTTAGAATTTATTGAGAGATTATCAAACAAACTACAACAAATTTTTGGAAATAAATTCTTT
GCTCGACCAAATCAGTTTCGTAAGCAGGTTTGTTGGTTTGGAGAATTTGATGAGTTTTTATATATAGATACAGATATTGT
AGTTTTTGATAGAATTATTGATAATCTTAACTATCTAAATGAGTATGATTTCTTGTGTTTTGATTATCAACATTTAGGAG
GGATTAAGAATATCTTTACTCCAGAGATTTATCAAGTTTTTAGCAAAGAAGAACTTCTGGAAACTTTTAACGGAGGATGG
TGGGCATCCAAAAAAAATTTGATTTCAGAACAAGATTTGTATGAGACGTTTACTGAATGTGCAGCTCATCCAGAATACTT
TGATTTTTCTCAGAAAACTTCCGATCAACCAATTATTAATTATATGATATTGAAGCGAATTAAAAAGCGTTTCAATATTA
TTAATAGACCAGAAAAAGCACCTGGAAGTTGGGCAGGTACATCGCATTTTTATCGAGAAGGTGATCGACTGATAGATTCA
AATGTGAATCAACCTTTAGAATATCTACATTGGGCAGGAATTCGGATTCAACCAGGTTGTCCTTATTGGGATATTTGGGA
GTATTATAGATATTTGGGGGAAGCTAAACCTACTTACTATCCTCAGACAACTGAAAAGAATAAAAGTCTAGGAGAAAAAT
TTATTGATAAACTCAAAAATATAGCTCGGCATATCAAGAGAAGTTAA

Upstream 100 bases:

>100_bases
CAGTATTTACGACTAAACCAAAACCATATAAAACTACACCTAATCTTTTTCAGCGTGTTTTAAAGAAACTAAAATTAACT
CACAAATAGAGAAAAATCTG

Downstream 100 bases:

>100_bases
GGTCATTTCAGTTATCAGTGTTATACTTAAAATTACTTCCTAATTGTTCCACTTATTCAACCCAAATAACTTTAAGCATT
TCTTGTTGTTATAAAATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSRGIYITANDKALEQGIALLNSIRKYDRDTPIILIPYDDNYQIVAELFSKDYGVTIYQDLEFIERLSNKLQQIFGNKFF
ARPNQFRKQVCWFGEFDEFLYIDTDIVVFDRIIDNLNYLNEYDFLCFDYQHLGGIKNIFTPEIYQVFSKEELLETFNGGW
WASKKNLISEQDLYETFTECAAHPEYFDFSQKTSDQPIINYMILKRIKKRFNIINRPEKAPGSWAGTSHFYREGDRLIDS
NVNQPLEYLHWAGIRIQPGCPYWDIWEYYRYLGEAKPTYYPQTTEKNKSLGEKFIDKLKNIARHIKRS

Sequences:

>Translated_308_residues
MSRGIYITANDKALEQGIALLNSIRKYDRDTPIILIPYDDNYQIVAELFSKDYGVTIYQDLEFIERLSNKLQQIFGNKFF
ARPNQFRKQVCWFGEFDEFLYIDTDIVVFDRIIDNLNYLNEYDFLCFDYQHLGGIKNIFTPEIYQVFSKEELLETFNGGW
WASKKNLISEQDLYETFTECAAHPEYFDFSQKTSDQPIINYMILKRIKKRFNIINRPEKAPGSWAGTSHFYREGDRLIDS
NVNQPLEYLHWAGIRIQPGCPYWDIWEYYRYLGEAKPTYYPQTTEKNKSLGEKFIDKLKNIARHIKRS
>Mature_307_residues
SRGIYITANDKALEQGIALLNSIRKYDRDTPIILIPYDDNYQIVAELFSKDYGVTIYQDLEFIERLSNKLQQIFGNKFFA
RPNQFRKQVCWFGEFDEFLYIDTDIVVFDRIIDNLNYLNEYDFLCFDYQHLGGIKNIFTPEIYQVFSKEELLETFNGGWW
ASKKNLISEQDLYETFTECAAHPEYFDFSQKTSDQPIINYMILKRIKKRFNIINRPEKAPGSWAGTSHFYREGDRLIDSN
VNQPLEYLHWAGIRIQPGCPYWDIWEYYRYLGEAKPTYYPQTTEKNKSLGEKFIDKLKNIARHIKRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36693; Mature: 36562

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRGIYITANDKALEQGIALLNSIRKYDRDTPIILIPYDDNYQIVAELFSKDYGVTIYQD
CCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEHHHH
LEFIERLSNKLQQIFGNKFFARPNQFRKQVCWFGEFDEFLYIDTDIVVFDRIIDNLNYLN
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHC
EYDFLCFDYQHLGGIKNIFTPEIYQVFSKEELLETFNGGWWASKKNLISEQDLYETFTEC
CCCCEEECHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHH
AAHPEYFDFSQKTSDQPIINYMILKRIKKRFNIINRPEKAPGSWAGTSHFYREGDRLIDS
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHC
NVNQPLEYLHWAGIRIQPGCPYWDIWEYYRYLGEAKPTYYPQTTEKNKSLGEKFIDKLKN
CCCHHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
IARHIKRS
HHHHHCCC
>Mature Secondary Structure 
SRGIYITANDKALEQGIALLNSIRKYDRDTPIILIPYDDNYQIVAELFSKDYGVTIYQD
CCCEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEHHHH
LEFIERLSNKLQQIFGNKFFARPNQFRKQVCWFGEFDEFLYIDTDIVVFDRIIDNLNYLN
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHC
EYDFLCFDYQHLGGIKNIFTPEIYQVFSKEELLETFNGGWWASKKNLISEQDLYETFTEC
CCCCEEECHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHH
AAHPEYFDFSQKTSDQPIINYMILKRIKKRFNIINRPEKAPGSWAGTSHFYREGDRLIDS
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHC
NVNQPLEYLHWAGIRIQPGCPYWDIWEYYRYLGEAKPTYYPQTTEKNKSLGEKFIDKLKN
CCCHHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
IARHIKRS
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA