Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476137

Identifier: 113476137

GI number: 113476137

Start: 3886603

End: 3887382

Strand: Reverse

Name: 113476137

Synonym: Tery_2519

Alternate gene names: NA

Gene position: 3887382-3886603 (Counterclockwise)

Preceding gene: 113476138

Following gene: 113476134

Centisome position: 50.16

GC content: 31.54

Gene sequence:

>780_bases
ATGACTCAGAAACAAAAAAACTTTTGTTTTTGTACTTTAGCACTAGGGCAAAGATATCGCGATATAACAAAGGAGTTAGT
TAAAGATTTAGAAACAAATGCTCCAGGAATTTCACTGGTAATTTATACAGAGAAACCTAATGATTTTAGTAGCCATAAAA
ATGTAATAGCTTTTAAACATCATCAACAAGGTATTCTACATTGTTATAACGATAAAAGAGTTGTCTGCCAAAAAGCAATA
TCATTATTTCCAGTAGCTATATATATAGATGCTGATACTAGAATTTTAGAATCACTACCAGAAGATATTGAATGGAAACC
AGGAATTACTGGACGGCATAAAAATTTAGTAGAACATGTTTCAAAATATCGTGCTTCTAGTTTACCAATATTGCAAAAGT
TGGCAGATAAGCTAAATATTTATGATGAGTCATTTAATAGTAGTAGATGGATAGGGGAAGCTTTATTTATTATCGTTAGA
GATAATGGTAAAGAAATAGAATTTTTGGAAACTTGGGGGAAGATTTCTAAGTATGCAGAATTGAGAGGAATGCACGCTGG
AGAAGGTAGTTTAATGGGATTAGCTGCTACAAAAGTTGGATGGGTTATTAATAGTGAAGCATGGCAAAAAATTAGTAGGG
TGACTCAGCACTGGGATGCTTCTCGTAGTAAACCAAAAGCAACTTATTGGGATAGGTTACAAAAAAGAATCGGTTATCAT
TATCGTTTAAATAAATCTAGAATAATGGCTTTAAGAGATTTTGAATTTTATTATAAATGA

Upstream 100 bases:

>100_bases
TTATCAGTGTTATACTTAAAATTACTTCCTAATTGTTCCACTTATTCAACCCAAATAACTTTAAGCATTTCTTGTTGTTA
TAAAATTTCCAGGTAAAAAT

Downstream 100 bases:

>100_bases
GGATTTTTTGATTACTCATAGTTTAAATCCAGATTAGACTAAGGTAGGTTGTAAAATATATGCCCAAATAACTCTCTTCC
CTTAATATTGATAGTTGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTQKQKNFCFCTLALGQRYRDITKELVKDLETNAPGISLVIYTEKPNDFSSHKNVIAFKHHQQGILHCYNDKRVVCQKAI
SLFPVAIYIDADTRILESLPEDIEWKPGITGRHKNLVEHVSKYRASSLPILQKLADKLNIYDESFNSSRWIGEALFIIVR
DNGKEIEFLETWGKISKYAELRGMHAGEGSLMGLAATKVGWVINSEAWQKISRVTQHWDASRSKPKATYWDRLQKRIGYH
YRLNKSRIMALRDFEFYYK

Sequences:

>Translated_259_residues
MTQKQKNFCFCTLALGQRYRDITKELVKDLETNAPGISLVIYTEKPNDFSSHKNVIAFKHHQQGILHCYNDKRVVCQKAI
SLFPVAIYIDADTRILESLPEDIEWKPGITGRHKNLVEHVSKYRASSLPILQKLADKLNIYDESFNSSRWIGEALFIIVR
DNGKEIEFLETWGKISKYAELRGMHAGEGSLMGLAATKVGWVINSEAWQKISRVTQHWDASRSKPKATYWDRLQKRIGYH
YRLNKSRIMALRDFEFYYK
>Mature_258_residues
TQKQKNFCFCTLALGQRYRDITKELVKDLETNAPGISLVIYTEKPNDFSSHKNVIAFKHHQQGILHCYNDKRVVCQKAIS
LFPVAIYIDADTRILESLPEDIEWKPGITGRHKNLVEHVSKYRASSLPILQKLADKLNIYDESFNSSRWIGEALFIIVRD
NGKEIEFLETWGKISKYAELRGMHAGEGSLMGLAATKVGWVINSEAWQKISRVTQHWDASRSKPKATYWDRLQKRIGYHY
RLNKSRIMALRDFEFYYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30132; Mature: 30001

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQKQKNFCFCTLALGQRYRDITKELVKDLETNAPGISLVIYTEKPNDFSSHKNVIAFKH
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEE
HQQGILHCYNDKRVVCQKAISLFPVAIYIDADTRILESLPEDIEWKPGITGRHKNLVEHV
CCCCEEEEECCCHHHHHHHHHHEEEEEEECCCHHHHHHCCCCCCCCCCCCCCHHHHHHHH
SKYRASSLPILQKLADKLNIYDESFNSSRWIGEALFIIVRDNGKEIEFLETWGKISKYAE
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCEECEEEEEEEECCCCEEHHHHHHHHHHHHHH
LRGMHAGEGSLMGLAATKVGWVINSEAWQKISRVTQHWDASRSKPKATYWDRLQKRIGYH
HCCCCCCCCCEEEEHHHHHCEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCE
YRLNKSRIMALRDFEFYYK
EEECHHHEEEEECCCHHCC
>Mature Secondary Structure 
TQKQKNFCFCTLALGQRYRDITKELVKDLETNAPGISLVIYTEKPNDFSSHKNVIAFKH
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEE
HQQGILHCYNDKRVVCQKAISLFPVAIYIDADTRILESLPEDIEWKPGITGRHKNLVEHV
CCCCEEEEECCCHHHHHHHHHHEEEEEEECCCHHHHHHCCCCCCCCCCCCCCHHHHHHHH
SKYRASSLPILQKLADKLNIYDESFNSSRWIGEALFIIVRDNGKEIEFLETWGKISKYAE
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCEECEEEEEEEECCCCEEHHHHHHHHHHHHHH
LRGMHAGEGSLMGLAATKVGWVINSEAWQKISRVTQHWDASRSKPKATYWDRLQKRIGYH
HCCCCCCCCCEEEEHHHHHCEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCE
YRLNKSRIMALRDFEFYYK
EEECHHHEEEEECCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA