Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475985

Identifier: 113475985

GI number: 113475985

Start: 3635609

End: 3637234

Strand: Reverse

Name: 113475985

Synonym: Tery_2353

Alternate gene names: NA

Gene position: 3637234-3635609 (Counterclockwise)

Preceding gene: 113475987

Following gene: 113475984

Centisome position: 46.93

GC content: 41.27

Gene sequence:

>1626_bases
ATGCTAGAAAGTATTATTTGGATATTATTAACTGGCTTTTTTGTCGGTGAAATTGCCTTGAGGTTAAAAGCACCACCCCT
AATAGGAATGCTATTAGTGGGAATATTATTAGGTCCTCAAATTAGCAATACTATCGACTCTAGCATTTTGGAAGCTGCCG
ACTCTCTGCGCACCTTTGCTGTAACAATAATTTTAATGAAAGCAGGCTTAGGTCTAGACAGAGAAAAATTAGCACAACAA
GGTAGTGTAGCACTGCGCCTAGGTTTTCTCCCAGCAACCTGTGAAGCTATTGTTATTGCCCTAGCCGCTATGTGGTTACT
TAATTTTGACTTTGCTACCGGGTTGTTATTAGGCTGTATCATCGGTGCCGAGTCTCCTGCAGTTATTGTTCCTGGAATGT
TGCGGCTCAAAAGTTTGGGTTGGGGCGTGACTAAAGGTATTCCTGATGCAATTTTAACTGGTAGTGCTTTGTCAGATGTT
TTGCTGTTGTTAATTTTTAGTTTACTACTGGCATTTTTATCCCAGGGAACAACTATTGGCATAACTTTACCTGGTGGCAT
CACTATAAACTTATTACAAATATTACCCTTTCAGGTTACTCTGCAAATAATTTTGGGAGCGATCGCTGGGTTGCTGATGG
CGCAAATATTAGTATTATTATTAGTCAAACAAAATTGGACTCAAAATTCTACCCAAGATACTTTAGTTGCTGGAAGCCTG
ACCCTCTTATTAGTAGTCTTAGCAGAAAAATTCCCCATATTCTCTGGTTATTTGGCAGTCATGGCAACAGGATTTTTTGT
GCTCGAATTTGATCCTCCCCTGGGGCGACGCTTAAGAAATGGTTTTGAGACCTTGTGGACGATAGCGCAAATAATTTTGT
TTGTTTTGCTCGGTGCTAGTATCCCCTTGCAAGTCCTAGAAAATGTCTTCTTAGTGGGGTTATTAATTTTAGCTCTGGGT
ACTTTTGTCGGGCGGATGTTTGGTTGGTATCTCTCGACCTTGGGCAGTAATTGGAATTTGCAAGAACGTCTATTTTTACT
ACCTGGAAATTCTGCAAAAGCAACTGTGCAGGCTGCTATTGGTGCTATTCCTCTAGCGGTAGGCATTGAGGGAGGAGAAA
CAATTTTAGCGATCGCCGCCCTTTCCATATTAGTCACAGCACCTTTGGGAGCTTGGGCAATACCTGCCTTAGCACCAAAA
CTGTTAGAAAAAGGAGAAGTCGATCCGACAAAAGTAGCGATCGCTCGTCCTATTATATTATTAGCCGCCGTTGATACCTC
ACCTCTTGCCGTTGATGTGTTATTAAAAGCTGCAGAACTGGCGAGGCGTTGTGACGGGGAAATTGTAGTCTTGCACGTTC
TTCAATTTGAATACCGCAACAGTATTGAGCAACTGCGACAGCAAACTAGGCAACTTTTGGCAGATATTCGGCATCAGTTT
ATAACTGTTGCGGGTGATGCTTCAGAAGAAATAATTTTTATAGCGCAAGAGTATGGAGCAGCAGAAATTGTCATAGGAAA
AAAGGGGGATCGTTTATGGGACAATGTGTTAGTTGGGTCAGTTTCTCAAGCAGTTTTAGAAAAGAGTTTAATTCCTGTAG
TGGTAGTTGAAAAAATAAAAACATAG

Upstream 100 bases:

>100_bases
TATTTTTACCTGATAAAAAAACAACAAAAAACTTAAAATTGTTAGTTTTAACAATAGCTTATTCCAACCTATTATTAGAT
TAATTATTAATTCTTAAACT

Downstream 100 bases:

>100_bases
TTGTATATAGAAACAAAAAATAAGTCATTTTCAGAATGGAATAGTTAAGCATAAATTGTTTAATTACTTGTGATGATGAA
ATAATTAAGATATGATGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Na(+)/H(+) Antiporter; Transporter CPA2 Family; Na+/H+ Antiporter; Sodium/Proton Antiporter CPA1 Family; Na+/H+-Exchanging Protein; Sodium/Hydrogen Antiporter; Sodium/Hydrogen Exchanger Family Protein; Na+/H+-Exchanging ProteinNa+/H+ Antiporter; Monovalent CationProton Antiporter-2 Family Protein; Transporter Monovalent CationProton Antiporter-2 Family; Sodium/Hydrogen Exchanger/Universal Stress Family Protein

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MLESIIWILLTGFFVGEIALRLKAPPLIGMLLVGILLGPQISNTIDSSILEAADSLRTFAVTIILMKAGLGLDREKLAQQ
GSVALRLGFLPATCEAIVIALAAMWLLNFDFATGLLLGCIIGAESPAVIVPGMLRLKSLGWGVTKGIPDAILTGSALSDV
LLLLIFSLLLAFLSQGTTIGITLPGGITINLLQILPFQVTLQIILGAIAGLLMAQILVLLLVKQNWTQNSTQDTLVAGSL
TLLLVVLAEKFPIFSGYLAVMATGFFVLEFDPPLGRRLRNGFETLWTIAQIILFVLLGASIPLQVLENVFLVGLLILALG
TFVGRMFGWYLSTLGSNWNLQERLFLLPGNSAKATVQAAIGAIPLAVGIEGGETILAIAALSILVTAPLGAWAIPALAPK
LLEKGEVDPTKVAIARPIILLAAVDTSPLAVDVLLKAAELARRCDGEIVVLHVLQFEYRNSIEQLRQQTRQLLADIRHQF
ITVAGDASEEIIFIAQEYGAAEIVIGKKGDRLWDNVLVGSVSQAVLEKSLIPVVVVEKIKT

Sequences:

>Translated_541_residues
MLESIIWILLTGFFVGEIALRLKAPPLIGMLLVGILLGPQISNTIDSSILEAADSLRTFAVTIILMKAGLGLDREKLAQQ
GSVALRLGFLPATCEAIVIALAAMWLLNFDFATGLLLGCIIGAESPAVIVPGMLRLKSLGWGVTKGIPDAILTGSALSDV
LLLLIFSLLLAFLSQGTTIGITLPGGITINLLQILPFQVTLQIILGAIAGLLMAQILVLLLVKQNWTQNSTQDTLVAGSL
TLLLVVLAEKFPIFSGYLAVMATGFFVLEFDPPLGRRLRNGFETLWTIAQIILFVLLGASIPLQVLENVFLVGLLILALG
TFVGRMFGWYLSTLGSNWNLQERLFLLPGNSAKATVQAAIGAIPLAVGIEGGETILAIAALSILVTAPLGAWAIPALAPK
LLEKGEVDPTKVAIARPIILLAAVDTSPLAVDVLLKAAELARRCDGEIVVLHVLQFEYRNSIEQLRQQTRQLLADIRHQF
ITVAGDASEEIIFIAQEYGAAEIVIGKKGDRLWDNVLVGSVSQAVLEKSLIPVVVVEKIKT
>Mature_541_residues
MLESIIWILLTGFFVGEIALRLKAPPLIGMLLVGILLGPQISNTIDSSILEAADSLRTFAVTIILMKAGLGLDREKLAQQ
GSVALRLGFLPATCEAIVIALAAMWLLNFDFATGLLLGCIIGAESPAVIVPGMLRLKSLGWGVTKGIPDAILTGSALSDV
LLLLIFSLLLAFLSQGTTIGITLPGGITINLLQILPFQVTLQIILGAIAGLLMAQILVLLLVKQNWTQNSTQDTLVAGSL
TLLLVVLAEKFPIFSGYLAVMATGFFVLEFDPPLGRRLRNGFETLWTIAQIILFVLLGASIPLQVLENVFLVGLLILALG
TFVGRMFGWYLSTLGSNWNLQERLFLLPGNSAKATVQAAIGAIPLAVGIEGGETILAIAALSILVTAPLGAWAIPALAPK
LLEKGEVDPTKVAIARPIILLAAVDTSPLAVDVLLKAAELARRCDGEIVVLHVLQFEYRNSIEQLRQQTRQLLADIRHQF
ITVAGDASEEIIFIAQEYGAAEIVIGKKGDRLWDNVLVGSVSQAVLEKSLIPVVVVEKIKT

Specific function: Unknown

COG id: COG0025

COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI47271479, Length=371, Percent_Identity=32.6145552560647, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI66793392, Length=372, Percent_Identity=29.8387096774194, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI154937338, Length=308, Percent_Identity=29.2207792207792, Blast_Score=99, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI25152227, Length=407, Percent_Identity=25.7985257985258, Blast_Score=92, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17567635, Length=414, Percent_Identity=25.1207729468599, Blast_Score=82, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI32566724, Length=181, Percent_Identity=26.5193370165746, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI20129297, Length=406, Percent_Identity=31.5270935960591, Blast_Score=125, Evalue=8e-29,
Organism=Drosophila melanogaster, GI45550940, Length=406, Percent_Identity=31.5270935960591, Blast_Score=125, Evalue=9e-29,
Organism=Drosophila melanogaster, GI24649169, Length=429, Percent_Identity=27.7389277389277, Blast_Score=96, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57782; Mature: 57782

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESIIWILLTGFFVGEIALRLKAPPLIGMLLVGILLGPQISNTIDSSILEAADSLRTFA
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VTIILMKAGLGLDREKLAQQGSVALRLGFLPATCEAIVIALAAMWLLNFDFATGLLLGCI
HHHHHHHHCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGAESPAVIVPGMLRLKSLGWGVTKGIPDAILTGSALSDVLLLLIFSLLLAFLSQGTTIG
HCCCCCCEECCHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEE
ITLPGGITINLLQILPFQVTLQIILGAIAGLLMAQILVLLLVKQNWTQNSTQDTLVAGSL
EEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
TLLLVVLAEKFPIFSGYLAVMATGFFVLEFDPPLGRRLRNGFETLWTIAQIILFVLLGAS
HHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
IPLQVLENVFLVGLLILALGTFVGRMFGWYLSTLGSNWNLQERLFLLPGNSAKATVQAAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHH
GAIPLAVGIEGGETILAIAALSILVTAPLGAWAIPALAPKLLEKGEVDPTKVAIARPIIL
CCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCEEE
LAAVDTSPLAVDVLLKAAELARRCDGEIVVLHVLQFEYRNSIEQLRQQTRQLLADIRHQF
EEECCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
ITVAGDASEEIIFIAQEYGAAEIVIGKKGDRLWDNVLVGSVSQAVLEKSLIPVVVVEKIK
EEEECCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
T
C
>Mature Secondary Structure
MLESIIWILLTGFFVGEIALRLKAPPLIGMLLVGILLGPQISNTIDSSILEAADSLRTFA
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VTIILMKAGLGLDREKLAQQGSVALRLGFLPATCEAIVIALAAMWLLNFDFATGLLLGCI
HHHHHHHHCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGAESPAVIVPGMLRLKSLGWGVTKGIPDAILTGSALSDVLLLLIFSLLLAFLSQGTTIG
HCCCCCCEECCHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEE
ITLPGGITINLLQILPFQVTLQIILGAIAGLLMAQILVLLLVKQNWTQNSTQDTLVAGSL
EEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
TLLLVVLAEKFPIFSGYLAVMATGFFVLEFDPPLGRRLRNGFETLWTIAQIILFVLLGAS
HHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
IPLQVLENVFLVGLLILALGTFVGRMFGWYLSTLGSNWNLQERLFLLPGNSAKATVQAAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHH
GAIPLAVGIEGGETILAIAALSILVTAPLGAWAIPALAPKLLEKGEVDPTKVAIARPIIL
CCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCEEE
LAAVDTSPLAVDVLLKAAELARRCDGEIVVLHVLQFEYRNSIEQLRQQTRQLLADIRHQF
EEECCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
ITVAGDASEEIIFIAQEYGAAEIVIGKKGDRLWDNVLVGSVSQAVLEKSLIPVVVVEKIK
EEEECCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
T
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA