Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475984

Identifier: 113475984

GI number: 113475984

Start: 3633780

End: 3635186

Strand: Reverse

Name: 113475984

Synonym: Tery_2352

Alternate gene names: NA

Gene position: 3635186-3633780 (Counterclockwise)

Preceding gene: 113475985

Following gene: 113475983

Centisome position: 46.9

GC content: 39.52

Gene sequence:

>1407_bases
TTGATTGAAAAGAATAAATATTCACCCCCTTCCATAACCACTATTTCTCGTCAAGAACTACGGGAATTAGTTCGATCGCA
GCTTCAAACTCTACTAGAACAAGATAATTTGTCTGGAGCCAAAGCTCTTTTAGTACCAGTACAACCAGCCGATATTGCTG
AAGCGATCGAAGGTTTACCAGAAACTATGCAAGTCATTGCTTTTCGGTTACTGCCTAAAGTAGAAGCGATCGAAGTTTAT
GAACAACTAGGCTCTACTGTACAACAGTCTTTATGTGAAAAGTTTAAGCGCCAAGAAGTCATAGATATTGTTGATAAAAT
GTCCCCTGATGATCGTGTCAAACTCTTTGAAGAACTTCCAGCAGCTGTTGTCCGACGTTTATTAGGTCAACTCAGTCCTA
CTGAACGCCAAGCTACCGCCCAACTCCTGGGTTATGACTCCGGAACAGCAGGGCGGATAATGACTCCAGAATACATCTCC
CTTAAAGAAGAATATACCGTTGCCGAAAGTTTAGAACGTATTCGTTCACTAGCTAATGTTACCGAGACAGTTTATTCTCT
ATATGTCACTGACACTAACCGTTATCTTACAGGTATTTTATCACTTCGAGACTTAGTTACCTCTCAGCTCAACCAAACTA
TTGGGGAAATAATGAGTCGTGACTTTGTCTCGGTGCAAACTGGTACTGACCAAGAAGAAGTTGTCCGTGTTATTCAGCGT
TATGATTTTTTAGCAATACCAGTAGTTGACAGTGAACAAAGACTTGTGGGCATTATTACCGTTGATGATGTTCTTGATAT
TTTGGAACAGGAAACTACTGAAGATATTTATGCTTTAGGTGGGGTGCAGTCTGATGGTGATAATTATTTCCAGGTGAATT
TATTTACTGTTGCTCGTAGAAGGGTAGTTTGGTTATTTGTTTTACTACTGACAAATAGTGTTACAGGTGGAATTATTACA
GCACAAGAAGATATTCTGAAAAAGGTAGTTACTTTGGCAGCATTTATTCCATTATTAACTGGTACTGGTGGAAATGTGGG
GGCGCAGTCTTCAACTGTTGTCATTCGGGGTATGAATACTGATGAAATCTGGAAAATTGGAATTCTGAAAGTCATTATCC
GTGAAGCTTGTGCTGGTGCCATGCTTGGAAGTATTCTCGGTTTATTGGCAACAGCTTGGGCATACTTATTTATTGTTAAT
GGAAATTTAGAAGTCTCAGTGACCGTAGGAATAAGTTTAGTCGCTATCTCAACTTTGGCTTCTATTGCTGGCTCTGCTTT
GCCATTTTTGTTTCGCTCATTTGGGTTAGACCCAGCATTAATGTCAGCACCTTTTATTACAACTGCTGTGGATGTTCTCG
GTGTTTTAATTTATTTCAACTTGGCACGAATGATTCTACAAATATGA

Upstream 100 bases:

>100_bases
CACACCCTAAAAACTAGGACTTTATTGACTCTAAGGGAAAAAAAAATTTCCCTTAGCTTCTAAACTGAACTCAGGAACAT
ATCTCATAGGAGGGCTAACT

Downstream 100 bases:

>100_bases
AAAAAACCTCAAGGTGGGTTATGATTTATGATCATAAGTACTCACCTTTTATTATTCATAGATAGTAGCTTTTGTCTAAT
TTTATATCCTGAAAATCTGT

Product: magnesium transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MIEKNKYSPPSITTISRQELRELVRSQLQTLLEQDNLSGAKALLVPVQPADIAEAIEGLPETMQVIAFRLLPKVEAIEVY
EQLGSTVQQSLCEKFKRQEVIDIVDKMSPDDRVKLFEELPAAVVRRLLGQLSPTERQATAQLLGYDSGTAGRIMTPEYIS
LKEEYTVAESLERIRSLANVTETVYSLYVTDTNRYLTGILSLRDLVTSQLNQTIGEIMSRDFVSVQTGTDQEEVVRVIQR
YDFLAIPVVDSEQRLVGIITVDDVLDILEQETTEDIYALGGVQSDGDNYFQVNLFTVARRRVVWLFVLLLTNSVTGGIIT
AQEDILKKVVTLAAFIPLLTGTGGNVGAQSSTVVIRGMNTDEIWKIGILKVIIREACAGAMLGSILGLLATAWAYLFIVN
GNLEVSVTVGISLVAISTLASIAGSALPFLFRSFGLDPALMSAPFITTAVDVLGVLIYFNLARMILQI

Sequences:

>Translated_468_residues
MIEKNKYSPPSITTISRQELRELVRSQLQTLLEQDNLSGAKALLVPVQPADIAEAIEGLPETMQVIAFRLLPKVEAIEVY
EQLGSTVQQSLCEKFKRQEVIDIVDKMSPDDRVKLFEELPAAVVRRLLGQLSPTERQATAQLLGYDSGTAGRIMTPEYIS
LKEEYTVAESLERIRSLANVTETVYSLYVTDTNRYLTGILSLRDLVTSQLNQTIGEIMSRDFVSVQTGTDQEEVVRVIQR
YDFLAIPVVDSEQRLVGIITVDDVLDILEQETTEDIYALGGVQSDGDNYFQVNLFTVARRRVVWLFVLLLTNSVTGGIIT
AQEDILKKVVTLAAFIPLLTGTGGNVGAQSSTVVIRGMNTDEIWKIGILKVIIREACAGAMLGSILGLLATAWAYLFIVN
GNLEVSVTVGISLVAISTLASIAGSALPFLFRSFGLDPALMSAPFITTAVDVLGVLIYFNLARMILQI
>Mature_468_residues
MIEKNKYSPPSITTISRQELRELVRSQLQTLLEQDNLSGAKALLVPVQPADIAEAIEGLPETMQVIAFRLLPKVEAIEVY
EQLGSTVQQSLCEKFKRQEVIDIVDKMSPDDRVKLFEELPAAVVRRLLGQLSPTERQATAQLLGYDSGTAGRIMTPEYIS
LKEEYTVAESLERIRSLANVTETVYSLYVTDTNRYLTGILSLRDLVTSQLNQTIGEIMSRDFVSVQTGTDQEEVVRVIQR
YDFLAIPVVDSEQRLVGIITVDDVLDILEQETTEDIYALGGVQSDGDNYFQVNLFTVARRRVVWLFVLLLTNSVTGGIIT
AQEDILKKVVTLAAFIPLLTGTGGNVGAQSSTVVIRGMNTDEIWKIGILKVIIREACAGAMLGSILGLLATAWAYLFIVN
GNLEVSVTVGISLVAISTLASIAGSALPFLFRSFGLDPALMSAPFITTAVDVLGVLIYFNLARMILQI

Specific function: Acts as a magnesium transporter [H]

COG id: COG2239

COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR006668
- InterPro:   IPR006667
- InterPro:   IPR006669 [H]

Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]

EC number: NA

Molecular weight: Translated: 51399; Mature: 51399

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS00421 TM4_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKNKYSPPSITTISRQELRELVRSQLQTLLEQDNLSGAKALLVPVQPADIAEAIEGLP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCH
ETMQVIAFRLLPKVEAIEVYEQLGSTVQQSLCEKFKRQEVIDIVDKMSPDDRVKLFEELP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
AAVVRRLLGQLSPTERQATAQLLGYDSGTAGRIMTPEYISLKEEYTVAESLERIRSLANV
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TETVYSLYVTDTNRYLTGILSLRDLVTSQLNQTIGEIMSRDFVSVQTGTDQEEVVRVIQR
HHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH
YDFLAIPVVDSEQRLVGIITVDDVLDILEQETTEDIYALGGVQSDGDNYFQVNLFTVARR
CCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHH
RVVWLFVLLLTNSVTGGIITAQEDILKKVVTLAAFIPLLTGTGGNVGAQSSTVVIRGMNT
HHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC
DEIWKIGILKVIIREACAGAMLGSILGLLATAWAYLFIVNGNLEVSVTVGISLVAISTLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECHHHHHHHHHH
SIAGSALPFLFRSFGLDPALMSAPFITTAVDVLGVLIYFNLARMILQI
HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEKNKYSPPSITTISRQELRELVRSQLQTLLEQDNLSGAKALLVPVQPADIAEAIEGLP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCH
ETMQVIAFRLLPKVEAIEVYEQLGSTVQQSLCEKFKRQEVIDIVDKMSPDDRVKLFEELP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
AAVVRRLLGQLSPTERQATAQLLGYDSGTAGRIMTPEYISLKEEYTVAESLERIRSLANV
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TETVYSLYVTDTNRYLTGILSLRDLVTSQLNQTIGEIMSRDFVSVQTGTDQEEVVRVIQR
HHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH
YDFLAIPVVDSEQRLVGIITVDDVLDILEQETTEDIYALGGVQSDGDNYFQVNLFTVARR
CCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHH
RVVWLFVLLLTNSVTGGIITAQEDILKKVVTLAAFIPLLTGTGGNVGAQSSTVVIRGMNT
HHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC
DEIWKIGILKVIIREACAGAMLGSILGLLATAWAYLFIVNGNLEVSVTVGISLVAISTLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECHHHHHHHHHH
SIAGSALPFLFRSFGLDPALMSAPFITTAVDVLGVLIYFNLARMILQI
HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA