| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is inlA [H]
Identifier: 113475864
GI number: 113475864
Start: 3465879
End: 3466922
Strand: Reverse
Name: inlA [H]
Synonym: Tery_2223
Alternate gene names: 113475864
Gene position: 3466922-3465879 (Counterclockwise)
Preceding gene: 113475865
Following gene: 113475862
Centisome position: 44.73
GC content: 31.23
Gene sequence:
>1044_bases ATGTTAACATTAAAAAACCTAAAAACCATCTTTTTTAGCATTTATATTTGCTCAACAATACTCTTAAAACAAAACTCTGT AAATGCCAGCCCCATCTCCCCAGAAAAATTTTCCACCTTTAGAGAATGGTGTTTAAATCAAAGCAATATTTCTCCCAGTG CCCAATACACAATTAAAATTATTTTGCAAAAAGTAAAAACTCAAAATTGTATTGAAGCAGAAGAAAAACTTTCCCAACTC TCCTATTTTTCCCTAAATAATAATCAGATTAGAAATATTCTCCCAATATCTACCCTCAAAAATATCACTCAACTATCTCT GAATAACAATGAAATTTCAGAACTCTTCCCCCTCTCTAAACTCCAAAAACTAACTCATTTATATTTAGATAATAATAGAA TCATAAATATTGCTGACCTATCTCAATTAACCAACCTAACTCACCTTAGTATCAACGATAATAAAATCAAAAATTTATCC TCCTTATCCAACTTAGGCAAACTAACTCATCTCAACCTAATTTTTAATCAAATAGAAGATATATCTTCCCTATCCAACCT AACTCAATTAACTCGACTAAATCTTGGAGTAAACCACATCAAAAACATCAAACCTTTAAGAAATCTAACCAACTTAACCC ACCTATATCTTAATGATAATAATATCAAGGAACTTTCCCCACTCTCGAGCCTAACAAACCTCACAAACCTATATCTATAT CGAAATCAAATAAGCCATATTTCATCTCTTTCTAATCTTACCAACCTAACTTACCTTAGCCTCAGCGATAACTACATCAA AGAAATCTCAAACCTCTCTAATTTAAATCACCTCAAATCTCTTCTCCTAGTTTTCAATCAAATTACAAAAGTAGATTCTT TATCAACCTTAAACGACCTTACCTTATTAGACTTAAGTCGCAACAAAATAACAGATATTAGCTCCTTATCAACTCTAGCA AAATTAAAATCTCTACATCTGCGAAATAACCCACTTACTCAAAAAACCTGTCCTATACAACCAGAATCAATTTGTCGTTT CTAG
Upstream 100 bases:
>100_bases CAATTTAGTAAAAACCTGACTTAAATTGAAGTTTAATCAAGAATAGCATTGTTGTTTTCAGCCTTAGCACGACAGCAAAT GTCAAGTATGTGAGGTACGA
Downstream 100 bases:
>100_bases CAACCTTATTAAATTAATCTTGTGTATCTACTTATGCCATTAAAAATATTAAAAAATATAATTCAAAGCCCTTTATTCTC CCTATTAATTTTTTTGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MLTLKNLKTIFFSIYICSTILLKQNSVNASPISPEKFSTFREWCLNQSNISPSAQYTIKIILQKVKTQNCIEAEEKLSQL SYFSLNNNQIRNILPISTLKNITQLSLNNNEISELFPLSKLQKLTHLYLDNNRIINIADLSQLTNLTHLSINDNKIKNLS SLSNLGKLTHLNLIFNQIEDISSLSNLTQLTRLNLGVNHIKNIKPLRNLTNLTHLYLNDNNIKELSPLSSLTNLTNLYLY RNQISHISSLSNLTNLTYLSLSDNYIKEISNLSNLNHLKSLLLVFNQITKVDSLSTLNDLTLLDLSRNKITDISSLSTLA KLKSLHLRNNPLTQKTCPIQPESICRF
Sequences:
>Translated_347_residues MLTLKNLKTIFFSIYICSTILLKQNSVNASPISPEKFSTFREWCLNQSNISPSAQYTIKIILQKVKTQNCIEAEEKLSQL SYFSLNNNQIRNILPISTLKNITQLSLNNNEISELFPLSKLQKLTHLYLDNNRIINIADLSQLTNLTHLSINDNKIKNLS SLSNLGKLTHLNLIFNQIEDISSLSNLTQLTRLNLGVNHIKNIKPLRNLTNLTHLYLNDNNIKELSPLSSLTNLTNLYLY RNQISHISSLSNLTNLTYLSLSDNYIKEISNLSNLNHLKSLLLVFNQITKVDSLSTLNDLTLLDLSRNKITDISSLSTLA KLKSLHLRNNPLTQKTCPIQPESICRF >Mature_347_residues MLTLKNLKTIFFSIYICSTILLKQNSVNASPISPEKFSTFREWCLNQSNISPSAQYTIKIILQKVKTQNCIEAEEKLSQL SYFSLNNNQIRNILPISTLKNITQLSLNNNEISELFPLSKLQKLTHLYLDNNRIINIADLSQLTNLTHLSINDNKIKNLS SLSNLGKLTHLNLIFNQIEDISSLSNLTQLTRLNLGVNHIKNIKPLRNLTNLTHLYLNDNNIKELSPLSSLTNLTNLYLY RNQISHISSLSNLTNLTYLSLSDNYIKEISNLSNLNHLKSLLLVFNQITKVDSLSTLNDLTLLDLSRNKITDISSLSTLA KLKSLHLRNNPLTQKTCPIQPESICRF
Specific function: Mediates the entry of Listeria monocytogenes into cells [H]
COG id: COG4886
COG function: function code S; Leucine-rich repeat (LRR) protein
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 14 LRR (leucine-rich) repeats [H]
Homologues:
Organism=Homo sapiens, GI4506013, Length=254, Percent_Identity=37.007874015748, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI55743114, Length=166, Percent_Identity=42.1686746987952, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI4504379, Length=277, Percent_Identity=30.6859205776173, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI45827729, Length=305, Percent_Identity=26.8852459016393, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI45827731, Length=305, Percent_Identity=26.8852459016393, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI31377705, Length=165, Percent_Identity=34.5454545454545, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI4503743, Length=243, Percent_Identity=30.8641975308642, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI21389483, Length=206, Percent_Identity=31.5533980582524, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI238908508, Length=298, Percent_Identity=30.8724832214765, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI62912470, Length=297, Percent_Identity=29.6296296296296, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI62912472, Length=297, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI76880480, Length=259, Percent_Identity=29.7297297297297, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI157674358, Length=143, Percent_Identity=36.3636363636364, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI157694513, Length=199, Percent_Identity=31.6582914572864, Blast_Score=65, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17554124, Length=190, Percent_Identity=38.9473684210526, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17536161, Length=253, Percent_Identity=33.596837944664, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17531555, Length=262, Percent_Identity=31.6793893129771, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71984630, Length=283, Percent_Identity=32.1554770318021, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17551022, Length=258, Percent_Identity=32.9457364341085, Blast_Score=68, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6322655, Length=222, Percent_Identity=36.4864864864865, Blast_Score=79, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6322455, Length=266, Percent_Identity=33.8345864661654, Blast_Score=62, Evalue=9e-11, Organism=Drosophila melanogaster, GI21358617, Length=211, Percent_Identity=35.5450236966825, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI281362655, Length=268, Percent_Identity=29.8507462686567, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI281362651, Length=268, Percent_Identity=29.8507462686567, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI116007092, Length=268, Percent_Identity=29.8507462686567, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI281362657, Length=268, Percent_Identity=29.8507462686567, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24650330, Length=268, Percent_Identity=29.8507462686567, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24650334, Length=268, Percent_Identity=29.8507462686567, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24650332, Length=268, Percent_Identity=29.8507462686567, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI281362653, Length=268, Percent_Identity=29.8507462686567, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI62472958, Length=268, Percent_Identity=29.8507462686567, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI161078260, Length=260, Percent_Identity=35, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI161078262, Length=260, Percent_Identity=35, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI45551891, Length=261, Percent_Identity=34.8659003831418, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI161078264, Length=261, Percent_Identity=34.8659003831418, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI24650336, Length=269, Percent_Identity=30.1115241635688, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI21358045, Length=261, Percent_Identity=34.8659003831418, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI221379725, Length=316, Percent_Identity=29.746835443038, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI221379722, Length=316, Percent_Identity=29.746835443038, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI221330678, Length=163, Percent_Identity=33.7423312883436, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI85726404, Length=163, Percent_Identity=33.7423312883436, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI221500776, Length=276, Percent_Identity=32.6086956521739, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014755 - InterPro: IPR019948 - InterPro: IPR014756 - InterPro: IPR001611 - InterPro: IPR013378 - InterPro: IPR019931 - InterPro: IPR012569 - InterPro: IPR001899 [H]
Pfam domain/function: PF09479 Flg_new; PF00746 Gram_pos_anchor; PF00560 LRR_1; PF08191 LRR_adjacent [H]
EC number: NA
Molecular weight: Translated: 39474; Mature: 39474
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLKNLKTIFFSIYICSTILLKQNSVNASPISPEKFSTFREWCLNQSNISPSAQYTIKI CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH ILQKVKTQNCIEAEEKLSQLSYFSLNNNQIRNILPISTLKNITQLSLNNNEISELFPLSK HHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHEECHHHHHHHHHCCCCCCHHHHHHCHHH LQKLTHLYLDNNRIINIADLSQLTNLTHLSINDNKIKNLSSLSNLGKLTHLNLIFNQIED HHHHHHHEECCCCEEEEHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ISSLSNLTQLTRLNLGVNHIKNIKPLRNLTNLTHLYLNDNNIKELSPLSSLTNLTNLYLY HHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHH RNQISHISSLSNLTNLTYLSLSDNYIKEISNLSNLNHLKSLLLVFNQITKVDSLSTLNDL HHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE TLLDLSRNKITDISSLSTLAKLKSLHLRNNPLTQKTCPIQPESICRF EEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MLTLKNLKTIFFSIYICSTILLKQNSVNASPISPEKFSTFREWCLNQSNISPSAQYTIKI CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH ILQKVKTQNCIEAEEKLSQLSYFSLNNNQIRNILPISTLKNITQLSLNNNEISELFPLSK HHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHEECHHHHHHHHHCCCCCCHHHHHHCHHH LQKLTHLYLDNNRIINIADLSQLTNLTHLSINDNKIKNLSSLSNLGKLTHLNLIFNQIED HHHHHHHEECCCCEEEEHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ISSLSNLTQLTRLNLGVNHIKNIKPLRNLTNLTHLYLNDNNIKELSPLSSLTNLTNLYLY HHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHH RNQISHISSLSNLTNLTYLSLSDNYIKEISNLSNLNHLKSLLLVFNQITKVDSLSTLNDL HHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE TLLDLSRNKITDISSLSTLAKLKSLHLRNNPLTQKTCPIQPESICRF EEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9541569 [H]