| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is thiG
Identifier: 113475862
GI number: 113475862
Start: 3462429
End: 3463268
Strand: Reverse
Name: thiG
Synonym: Tery_2221
Alternate gene names: 113475862
Gene position: 3463268-3462429 (Counterclockwise)
Preceding gene: 113475864
Following gene: 113475861
Centisome position: 44.69
GC content: 40.48
Gene sequence:
>840_bases ATGCAAACAGTTGAAAAATTAACTACAGAAACTCTAGAAAAACCTCTAATTATTGCCGGTAAAAAGTTTACCTCTCGTCT GATGACAGGCACAGGCAAGTATCCGACTATTGAGACAATGCAGCAAAGTATAGAGGCTAGTAAATGTGAAATTATCACTG TAGCAGTACGACGAGTACAAACTCAAGCTCCTGGCCATAAAGGGTTAGCAGAAGCTATAGACTGGCAAAAAGTCTGGATG TTGCCTAATACTGCTGGTTGTCAAACTGCTGAAGATGCAGTAAGAGTAGCCAGGTTGGGTAGAGAAATGGCAAAGTTGTT AGGCCAAGAAGATAATAATTTTGTCAAACTAGAAGTTATTCCTGACTCTAAATATTTACTGCCAGACCCTATCGGAACTC TACAAGCCGCAGAACAGTTAATTAAAGAAGGTTTTGCTGTATTACCTTATATTAATGCTGACCCACTTCTAGCTAAAAGA CTTGAGGAGGCTGGTTGTTCTACAGTTATGCCTTTGGGTTCACCCATAGGCTCAGGCCAGGGAATACAAAATGCAGCCAA TATTTCCATAATTATTGACAATTCTACTGTTCCTGTGGTAATAGATGCCGGTATCGGAACTCCCAGTGAAGCAACTCAAG CAATGGAAATGGGAGCTGATGCTTTACTAATTAATTCAGCGATCGCTTTAGCCAAAAATCCGCCCATCATGGCAAAAGCT ATGGGAATGGCCACAGAATCAGGACGTTTAGCTTATCTAGCTGGCAGAATACCGAAAAAAAGTTATGCTACTCCTTCTTC TCCTGTAACTGGAAAGATTAATACAACTACTTCAGAATAA
Upstream 100 bases:
>100_bases TAGGAAGCAGAAGGAACAGGAGTTGGAGATATTTTTAAGAAGTTCAGTTATTAGACATAATATTTAGGACTGCTATAGTT ATAAACATCAAAATTAAACA
Downstream 100 bases:
>100_bases TAATTTCTTATATTCTCATATTCTCCGAATTTCTGTTAGGCTAAGTAATAGTTAAGAAATAATAAAGAAATAGGGACTTT GGGTTATGCCATATACAACA
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MQTVEKLTTETLEKPLIIAGKKFTSRLMTGTGKYPTIETMQQSIEASKCEIITVAVRRVQTQAPGHKGLAEAIDWQKVWM LPNTAGCQTAEDAVRVARLGREMAKLLGQEDNNFVKLEVIPDSKYLLPDPIGTLQAAEQLIKEGFAVLPYINADPLLAKR LEEAGCSTVMPLGSPIGSGQGIQNAANISIIIDNSTVPVVIDAGIGTPSEATQAMEMGADALLINSAIALAKNPPIMAKA MGMATESGRLAYLAGRIPKKSYATPSSPVTGKINTTTSE
Sequences:
>Translated_279_residues MQTVEKLTTETLEKPLIIAGKKFTSRLMTGTGKYPTIETMQQSIEASKCEIITVAVRRVQTQAPGHKGLAEAIDWQKVWM LPNTAGCQTAEDAVRVARLGREMAKLLGQEDNNFVKLEVIPDSKYLLPDPIGTLQAAEQLIKEGFAVLPYINADPLLAKR LEEAGCSTVMPLGSPIGSGQGIQNAANISIIIDNSTVPVVIDAGIGTPSEATQAMEMGADALLINSAIALAKNPPIMAKA MGMATESGRLAYLAGRIPKKSYATPSSPVTGKINTTTSE >Mature_279_residues MQTVEKLTTETLEKPLIIAGKKFTSRLMTGTGKYPTIETMQQSIEASKCEIITVAVRRVQTQAPGHKGLAEAIDWQKVWM LPNTAGCQTAEDAVRVARLGREMAKLLGQEDNNFVKLEVIPDSKYLLPDPIGTLQAAEQLIKEGFAVLPYINADPLLAKR LEEAGCSTVMPLGSPIGSGQGIQNAANISIIIDNSTVPVVIDAGIGTPSEATQAMEMGADALLINSAIALAKNPPIMAKA MGMATESGRLAYLAGRIPKKSYATPSSPVTGKINTTTSE
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family
Homologues:
Organism=Escherichia coli, GI48994993, Length=261, Percent_Identity=49.8084291187739, Blast_Score=250, Evalue=7e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIG_TRIEI (Q112X4)
Other databases:
- EMBL: CP000393 - RefSeq: YP_721923.1 - ProteinModelPortal: Q112X4 - SMR: Q112X4 - STRING: Q112X4 - GeneID: 4243254 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_2221 - NMPDR: fig|203124.1.peg.1421 - eggNOG: COG2022 - HOGENOM: HBG296821 - OMA: PIIIDAG - PhylomeDB: Q112X4 - ProtClustDB: PRK00208 - BioCyc: TERY203124:TERY_2221-MONOMER - GO: GO:0005737 - HAMAP: MF_00443 - InterPro: IPR013785 - InterPro: IPR008867 - Gene3D: G3DSA:3.20.20.70
Pfam domain/function: PF05690 ThiG; SSF110399 ThiG
EC number: NA
Molecular weight: Translated: 29634; Mature: 29634
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: ACT_SITE 116-116 BINDING 177-177
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTVEKLTTETLEKPLIIAGKKFTSRLMTGTGKYPTIETMQQSIEASKCEIITVAVRRVQ CCHHHHHHHHHHCCCEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH TQAPGHKGLAEAIDWQKVWMLPNTAGCQTAEDAVRVARLGREMAKLLGQEDNNFVKLEVI HCCCCCCCHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE PDSKYLLPDPIGTLQAAEQLIKEGFAVLPYINADPLLAKRLEEAGCSTVMPLGSPIGSGQ CCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCEECCCCCCCCCCC GIQNAANISIIIDNSTVPVVIDAGIGTPSEATQAMEMGADALLINSAIALAKNPPIMAKA CCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCEEEHHHHHHHCCCCCHHHHH MGMATESGRLAYLAGRIPKKSYATPSSPVTGKINTTTSE HCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure MQTVEKLTTETLEKPLIIAGKKFTSRLMTGTGKYPTIETMQQSIEASKCEIITVAVRRVQ CCHHHHHHHHHHCCCEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH TQAPGHKGLAEAIDWQKVWMLPNTAGCQTAEDAVRVARLGREMAKLLGQEDNNFVKLEVI HCCCCCCCHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE PDSKYLLPDPIGTLQAAEQLIKEGFAVLPYINADPLLAKRLEEAGCSTVMPLGSPIGSGQ CCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCEECCCCCCCCCCC GIQNAANISIIIDNSTVPVVIDAGIGTPSEATQAMEMGADALLINSAIALAKNPPIMAKA CCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCEEEHHHHHHHCCCCCHHHHH MGMATESGRLAYLAGRIPKKSYATPSSPVTGKINTTTSE HCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA