Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475861

Identifier: 113475861

GI number: 113475861

Start: 3462170

End: 3462343

Strand: Reverse

Name: 113475861

Synonym: Tery_2220

Alternate gene names: NA

Gene position: 3462343-3462170 (Counterclockwise)

Preceding gene: 113475862

Following gene: 113475860

Centisome position: 44.67

GC content: 34.48

Gene sequence:

>174_bases
ATGCCATATACAACAGAAGAAGGTGGACGTTTAAATAATTTTGCTCAAGAGCCAAAAGTTTATCAAGCAGAAGCTCCAGA
TCAAAACCAACAAAAGCTTTATCTAATCTTAGGAGCTTTAGGAACTTTCTTAATAGTTAGTTTAGTGTTTGTGGCTTTTT
CTGTATCAGCTTAG

Upstream 100 bases:

>100_bases
ACTACTTCAGAATAATAATTTCTTATATTCTCATATTCTCCGAATTTCTGTTAGGCTAAGTAATAGTTAAGAAATAATAA
AGAAATAGGGACTTTGGGTT

Downstream 100 bases:

>100_bases
ATTTTTTCTATAAATAACACAAAATATTAAAAGTATCTCTAATCCCTACTTTTCTATTGATAGTAGGGATCATGCTTAAG
GTTCTTAGAAATTAAGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MPYTTEEGGRLNNFAQEPKVYQAEAPDQNQQKLYLILGALGTFLIVSLVFVAFSVSA

Sequences:

>Translated_57_residues
MPYTTEEGGRLNNFAQEPKVYQAEAPDQNQQKLYLILGALGTFLIVSLVFVAFSVSA
>Mature_56_residues
PYTTEEGGRLNNFAQEPKVYQAEAPDQNQQKLYLILGALGTFLIVSLVFVAFSVSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6279; Mature: 6148

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYTTEEGGRLNNFAQEPKVYQAEAPDQNQQKLYLILGALGTFLIVSLVFVAFSVSA
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PYTTEEGGRLNNFAQEPKVYQAEAPDQNQQKLYLILGALGTFLIVSLVFVAFSVSA
CCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA