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The map label for this gene is atpF

Identifier: 113475842

GI number: 113475842

Start: 3432257

End: 3432790

Strand: Reverse

Name: atpF

Synonym: Tery_2201

Alternate gene names: 113475842

Gene position: 3432790-3432257 (Counterclockwise)

Preceding gene: 113475843

Following gene: 113475841

Centisome position: 44.29

GC content: 39.33

Gene sequence:

>534_bases
ATGGTAAATGTTTTATTACTAGCGACAGAAGCTAGTGCTGAAAAAGGTTTTGGTCTAAACCTGGATCTTTTAGATACAAA
CCTAATTAATTTAGGAATTCTAATTGCAGTTTTGCTGTATTTTGCTCCAGGCTTTATCGGGAAGATCCTGAGTGAAAGAC
GAGCTACTATTGAACAGGCAATAAAAGAAGCAGAACAGCGTCAACAAGAAGCAGCAACAGCATTAGCAGAGCAACAACAA
AATTTGACCCAAGCTCAAGCAGAGGCAGAAAAAATTCTAGCTCTTGCTGAAACAAGGGCTCAGGAGGTTAAACAAAGAAT
TGAACTTCAGGCCGAACAAGATATTGAGCGGATGAAGACAGCTGCTAACCAAGAAATGGATTCTGAAAAAGATAAGGCTA
TTGCCCAACTGCGCTCAATTCTGGCATCTAAAGCATTGGCAAAAGTAGAATCTCAATTGCAAGAAACTTTAGATGAGAAT
GCCCAGCAACAATTAATAGATAGTAGCATAGGGCGATTAGGAGGTCAATTATGA

Upstream 100 bases:

>100_bases
GTCAGATAGCCAAAAAAAATCCAGGTTGAAGAGTTGAATGATTAGATAACTAAGCTCAACATCTAACAAGATAATTAAAG
GCTGACTATCACAGAATATA

Downstream 100 bases:

>100_bases
GTGTAATAGCTGGTGAAATTGTAGAACCTTATGCAGCAGCTCTGATGTCCTTGGCTCAATCAAAAGACTTGACTGATAAA
TTTGCCGAAGATGTGCGGAG

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MVNVLLLATEASAEKGFGLNLDLLDTNLINLGILIAVLLYFAPGFIGKILSERRATIEQAIKEAEQRQQEAATALAEQQQ
NLTQAQAEAEKILALAETRAQEVKQRIELQAEQDIERMKTAANQEMDSEKDKAIAQLRSILASKALAKVESQLQETLDEN
AQQQLIDSSIGRLGGQL

Sequences:

>Translated_177_residues
MVNVLLLATEASAEKGFGLNLDLLDTNLINLGILIAVLLYFAPGFIGKILSERRATIEQAIKEAEQRQQEAATALAEQQQ
NLTQAQAEAEKILALAETRAQEVKQRIELQAEQDIERMKTAANQEMDSEKDKAIAQLRSILASKALAKVESQLQETLDEN
AQQQLIDSSIGRLGGQL
>Mature_177_residues
MVNVLLLATEASAEKGFGLNLDLLDTNLINLGILIAVLLYFAPGFIGKILSERRATIEQAIKEAEQRQQEAATALAEQQQ
NLTQAQAEAEKILALAETRAQEVKQRIELQAEQDIERMKTAANQEMDSEKDKAIAQLRSILASKALAKVESQLQETLDEN
AQQQLIDSSIGRLGGQL

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_TRIEI (Q112Z4)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_721903.1
- STRING:   Q112Z4
- GeneID:   4243234
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_2201
- NMPDR:   fig|203124.1.peg.1396
- eggNOG:   COG0711
- HOGENOM:   HBG708990
- OMA:   WGNFAFR
- ProtClustDB:   PRK07352
- BioCyc:   TERY203124:TERY_2201-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19425; Mature: 19425

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x156a12b8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNVLLLATEASAEKGFGLNLDLLDTNLINLGILIAVLLYFAPGFIGKILSERRATIEQA
CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKEAEQRQQEAATALAEQQQNLTQAQAEAEKILALAETRAQEVKQRIELQAEQDIERMKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AANQEMDSEKDKAIAQLRSILASKALAKVESQLQETLDENAQQQLIDSSIGRLGGQL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MVNVLLLATEASAEKGFGLNLDLLDTNLINLGILIAVLLYFAPGFIGKILSERRATIEQA
CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKEAEQRQQEAATALAEQQQNLTQAQAEAEKILALAETRAQEVKQRIELQAEQDIERMKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AANQEMDSEKDKAIAQLRSILASKALAKVESQLQETLDENAQQQLIDSSIGRLGGQL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA