| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is atpG
Identifier: 113475843
GI number: 113475843
Start: 3432882
End: 3433367
Strand: Reverse
Name: atpG
Synonym: Tery_2202
Alternate gene names: 113475843
Gene position: 3433367-3432882 (Counterclockwise)
Preceding gene: 113475844
Following gene: 113475842
Centisome position: 44.3
GC content: 37.86
Gene sequence:
>486_bases ATGATAAATTTGACAATTGTACTAGCTGTTGAAGAAGTAGCAGAAAAGGGTGGTTTGTTTGACATCAACGCAACTCTACC ACTAATGGCAATTCAGTTTTTACTTCTGGCTTTTGTTTTGGACAAAATTTTTTATAAGCCTCTGGGTAAAGCTATAGATT CTCGTGCAGATTATATTCGCGAAAATCAAGTAAAAGCAAAAGAACGTTTGGCAAAGGCTAAACAATTAGCTGAACAATAC GAGCAAGAGTTCGCACAAACCCGTCAGAAATCTCAGGTTGTTATTGTTGCGGCTCAAGCAGAAGCTGAAAAAATAGCAGC TACAAAAGTGGCTGTTGCTCAAAAAGAAGCACAAGTGAAAAGAGAACAAGCAGCTCAAGAAATAGAAAAGCAAAAGGAAG TAGCTTTGGAACAGTTAGAAGAACAGGTAGACTCTCTAAGTCGCCAAATTCTAGAAAAACTATTAGGACCAGAATTGGTC AGATAG
Upstream 100 bases:
>100_bases TGATTTATAGAAAGTAGAGATTTTAGATTTTTAATTTAGGAGATTGAAAATCTAAAATCTTTAAATCAAAAACTATGGGA ACCACCAAAAATTAGAGAAA
Downstream 100 bases:
>100_bases CCAAAAAAAATCCAGGTTGAAGAGTTGAATGATTAGATAACTAAGCTCAACATCTAACAAGATAATTAAAGGCTGACTAT CACAGAATATAATGGTAAAT
Product: F0F1 ATP synthase subunit B'
Products: ADP; phosphate; H+
Alternate protein names: ATP synthase F(0) sector subunit b'; ATPase subunit II; F-type ATPase subunit b'; F-ATPase subunit b'
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MINLTIVLAVEEVAEKGGLFDINATLPLMAIQFLLLAFVLDKIFYKPLGKAIDSRADYIRENQVKAKERLAKAKQLAEQY EQEFAQTRQKSQVVIVAAQAEAEKIAATKVAVAQKEAQVKREQAAQEIEKQKEVALEQLEEQVDSLSRQILEKLLGPELV R
Sequences:
>Translated_161_residues MINLTIVLAVEEVAEKGGLFDINATLPLMAIQFLLLAFVLDKIFYKPLGKAIDSRADYIRENQVKAKERLAKAKQLAEQY EQEFAQTRQKSQVVIVAAQAEAEKIAATKVAVAQKEAQVKREQAAQEIEKQKEVALEQLEEQVDSLSRQILEKLLGPELV R >Mature_161_residues MINLTIVLAVEEVAEKGGLFDINATLPLMAIQFLLLAFVLDKIFYKPLGKAIDSRADYIRENQVKAKERLAKAKQLAEQY EQEFAQTRQKSQVVIVAAQAEAEKIAATKVAVAQKEAQVKREQAAQEIEKQKEVALEQLEEQVDSLSRQILEKLLGPELV R
Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria
COG id: COG0711
COG function: function code C; F0F1-type ATP synthase, subunit b
Gene ontology:
Cell location: Cellular thylakoid membrane; Single-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATPase B chain family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATPX_TRIEI (Q112Z3)
Other databases:
- EMBL: CP000393 - RefSeq: YP_721904.1 - STRING: Q112Z3 - GeneID: 4243235 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_2202 - NMPDR: fig|203124.1.peg.1397 - eggNOG: COG0711 - HOGENOM: HBG708402 - OMA: DFDATLP - ProtClustDB: PRK07353 - BioCyc: TERY203124:TERY_2202-MONOMER - HAMAP: MF_01399 - InterPro: IPR002146
Pfam domain/function: PF00430 ATP-synt_B
EC number: 3.6.3.14
Molecular weight: Translated: 18089; Mature: 18089
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x182ef7c4)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLTIVLAVEEVAEKGGLFDINATLPLMAIQFLLLAFVLDKIFYKPLGKAIDSRADYIR CCEEEEEHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENQVKAKERLAKAKQLAEQYEQEFAQTRQKSQVVIVAAQAEAEKIAATKVAVAQKEAQVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHH REQAAQEIEKQKEVALEQLEEQVDSLSRQILEKLLGPELVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCH >Mature Secondary Structure MINLTIVLAVEEVAEKGGLFDINATLPLMAIQFLLLAFVLDKIFYKPLGKAIDSRADYIR CCEEEEEHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENQVKAKERLAKAKQLAEQYEQEFAQTRQKSQVVIVAAQAEAEKIAATKVAVAQKEAQVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHH REQAAQEIEKQKEVALEQLEEQVDSLSRQILEKLLGPELVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O; H+
Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA