Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is atpG

Identifier: 113475843

GI number: 113475843

Start: 3432882

End: 3433367

Strand: Reverse

Name: atpG

Synonym: Tery_2202

Alternate gene names: 113475843

Gene position: 3433367-3432882 (Counterclockwise)

Preceding gene: 113475844

Following gene: 113475842

Centisome position: 44.3

GC content: 37.86

Gene sequence:

>486_bases
ATGATAAATTTGACAATTGTACTAGCTGTTGAAGAAGTAGCAGAAAAGGGTGGTTTGTTTGACATCAACGCAACTCTACC
ACTAATGGCAATTCAGTTTTTACTTCTGGCTTTTGTTTTGGACAAAATTTTTTATAAGCCTCTGGGTAAAGCTATAGATT
CTCGTGCAGATTATATTCGCGAAAATCAAGTAAAAGCAAAAGAACGTTTGGCAAAGGCTAAACAATTAGCTGAACAATAC
GAGCAAGAGTTCGCACAAACCCGTCAGAAATCTCAGGTTGTTATTGTTGCGGCTCAAGCAGAAGCTGAAAAAATAGCAGC
TACAAAAGTGGCTGTTGCTCAAAAAGAAGCACAAGTGAAAAGAGAACAAGCAGCTCAAGAAATAGAAAAGCAAAAGGAAG
TAGCTTTGGAACAGTTAGAAGAACAGGTAGACTCTCTAAGTCGCCAAATTCTAGAAAAACTATTAGGACCAGAATTGGTC
AGATAG

Upstream 100 bases:

>100_bases
TGATTTATAGAAAGTAGAGATTTTAGATTTTTAATTTAGGAGATTGAAAATCTAAAATCTTTAAATCAAAAACTATGGGA
ACCACCAAAAATTAGAGAAA

Downstream 100 bases:

>100_bases
CCAAAAAAAATCCAGGTTGAAGAGTTGAATGATTAGATAACTAAGCTCAACATCTAACAAGATAATTAAAGGCTGACTAT
CACAGAATATAATGGTAAAT

Product: F0F1 ATP synthase subunit B'

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b'; ATPase subunit II; F-type ATPase subunit b'; F-ATPase subunit b'

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MINLTIVLAVEEVAEKGGLFDINATLPLMAIQFLLLAFVLDKIFYKPLGKAIDSRADYIRENQVKAKERLAKAKQLAEQY
EQEFAQTRQKSQVVIVAAQAEAEKIAATKVAVAQKEAQVKREQAAQEIEKQKEVALEQLEEQVDSLSRQILEKLLGPELV
R

Sequences:

>Translated_161_residues
MINLTIVLAVEEVAEKGGLFDINATLPLMAIQFLLLAFVLDKIFYKPLGKAIDSRADYIRENQVKAKERLAKAKQLAEQY
EQEFAQTRQKSQVVIVAAQAEAEKIAATKVAVAQKEAQVKREQAAQEIEKQKEVALEQLEEQVDSLSRQILEKLLGPELV
R
>Mature_161_residues
MINLTIVLAVEEVAEKGGLFDINATLPLMAIQFLLLAFVLDKIFYKPLGKAIDSRADYIRENQVKAKERLAKAKQLAEQY
EQEFAQTRQKSQVVIVAAQAEAEKIAATKVAVAQKEAQVKREQAAQEIEKQKEVALEQLEEQVDSLSRQILEKLLGPELV
R

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPX_TRIEI (Q112Z3)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_721904.1
- STRING:   Q112Z3
- GeneID:   4243235
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_2202
- NMPDR:   fig|203124.1.peg.1397
- eggNOG:   COG0711
- HOGENOM:   HBG708402
- OMA:   DFDATLP
- ProtClustDB:   PRK07353
- BioCyc:   TERY203124:TERY_2202-MONOMER
- HAMAP:   MF_01399
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 18089; Mature: 18089

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x182ef7c4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLTIVLAVEEVAEKGGLFDINATLPLMAIQFLLLAFVLDKIFYKPLGKAIDSRADYIR
CCEEEEEHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENQVKAKERLAKAKQLAEQYEQEFAQTRQKSQVVIVAAQAEAEKIAATKVAVAQKEAQVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
REQAAQEIEKQKEVALEQLEEQVDSLSRQILEKLLGPELVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCH
>Mature Secondary Structure
MINLTIVLAVEEVAEKGGLFDINATLPLMAIQFLLLAFVLDKIFYKPLGKAIDSRADYIR
CCEEEEEHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENQVKAKERLAKAKQLAEQYEQEFAQTRQKSQVVIVAAQAEAEKIAATKVAVAQKEAQVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
REQAAQEIEKQKEVALEQLEEQVDSLSRQILEKLLGPELVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA