| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475806
Identifier: 113475806
GI number: 113475806
Start: 3372238
End: 3374190
Strand: Reverse
Name: 113475806
Synonym: Tery_2160
Alternate gene names: NA
Gene position: 3374190-3372238 (Counterclockwise)
Preceding gene: 113475807
Following gene: 113475805
Centisome position: 43.54
GC content: 33.59
Gene sequence:
>1953_bases ATGGTAAATATTCAAAGCTCTTTAATGAAATCTCTTTGTTGTGTAGCGCTTAATTCCAAGTTACGCAGTATTTTGCTGTT TGATATTTCTATTAATAATTTGCAGCAAGTTGCTGGTATTTTAGTGTCTCTACTTAAAGTAACAACAGAATGTGAAAAAG TTGTTCCGTTGAAGTTGGGAACTTTTGAATCAGAGGATAATTTATGGGGGCAAGTTGGGCTAGGGGATGAGTTGGAAAAA CAAGCTTTTAATTGGCAATTTGGATTATTTAGTAGTGCAGATAATACGAATGAAATTAAGTTAGTAATTATTCCAGATCT GACTAAATTAAGTTTAGCAGCTATGAGGGCTTGTGTTGTATTGATGGGAGCAGATGTCGCACATTTAGAGCGTCACGGAC AACATAAATATTGGCAACCTAATTTTTGTTGGTTAGTTGGTTGTTCGAGTCAGAATGAGGAAATTGGTAAGATTTCACCT CATTTATTAGATAGGTTTGCCCTGCGTCTCAATATACAACAAATTGAGAATAATGATAAGAGAGTAACTCAGATTCAAAA GTTATTAAATAGTCCGGAAAAACCACAAAAATTATTGTTTGAAGAAAGGAAAATTGAACCAGAATTACAGGAATGGTTGA GACAAATTCGTTCCTCTTTACCAAGTATGACACCATCAGCTTTGGAGACAATTTTAAATTATAATTATGAGTCAAATATT TATCATCGGCGAGAAATTGCTTTGGCTCGTTTTGCAAGTACCTATGCTCAATTAGAAGCAGCAGATTCAGTCACAGTTAA GCATGTGGATAAAGTAGCTAAAATTATGGGATTGAAGTTAGAAAGAAATAATATTAATAATTCTATTGATTTTAAGAGTT TCAATCCACAACCAGAGACAGAAGATAATGATTTTGAACCACGAAGATCACCCGAATTATCAGAAATTAAAGACGAATCT TTATCAAATAATCCACCAGAAATTCCTGTTTATCAATCACAGGTATCTAATTATTTTCCAGATACTGATTTGCCAGAAAT TACACTTTTAGAAAATCCTTATATAGAAGATACTACTTCATTAGAAAGAGAAATAGATTCCCTTAAATTACCTACCCGTA TTTCTCAATCTAAAACTATTCATTGTGGCACAATTCTTGGGCTAGAAAAAACTACTAACGCTAATGATTTAGCTATAGTT AGGAGTCTATTAGAAGCAGCTAAATTTCAGAAAATTCGTCAGAAAAAACAGGGTAATAATTATCATAAATTGAAAATATT GCCCTCTGATTTATATCGTTATCGTCGCGCTTCCGTTGCGGAACAGATGTTCATGCTTTTACTAGATTATACTTGTTTAG AATATTGTCAATGGGAAGAAAAATTATTGCCCTATCTTAGTTGGGCTTACAGCCAAAGAGCAAGTGTTGGTTTAATTCAA GTTGGTATTGCTCCGAACTCTATCGTATTAGATAATAACCAGTCAAATGTTACAATTAATCCTGTAGAATTACGGGCTAA AAAAATATCTGGTCAAAATATTCTGGTACCTACAATTGCCATGGGACTAGACTTGGAAAAGACTAAAAAAGGTAAAGCTA CACCTTTGGCACATGGCTTTGACTTGGCTTTGAAAACTCTTCGTCATGCTTTACAACATGGGAAAAATACTGTACAAAAA GCGGTATTAGTGGTAGTTAGTGATGGTAGAGGTAATGTTCCTTTGGAAGCAAGTCATGTAGGAAAAATTAAGCCTCCTGT GGGGAAAAAAGGGGTAGAAGATGCTTTGGAAGTTGCTCGAAAAATTAGTAATTTAGGTAATTTAGAAACTATATTTCTTA ATCCTCAATCTAAACAATATCCTGATTTACCATTACTATTAGCGAAAGCATTAGGAGCAAAAATTTTGTCTATTCCACCT GTGGAAAATTGGGAAATTACAAGTCACAATTAA
Upstream 100 bases:
>100_bases GTGGGTAAGTCCTCATTTAGTTAGCAAACCCTAATTATATCCTTGGCAAAAAGTCACAGAAAAAGCCGGTAATTAATCAC AGAATTACTATTCCATAATT
Downstream 100 bases:
>100_bases TTTAAAAATCAAAACTAAAAAGTAAAAGGCTAGAAGAAAGTCAAAATTAAGTCAAAGGTTAAATTTTGCAGCAAATTCCA AGTATACAAAGTACAAATAT
Product: Mg-chelatase subunit ChlI-like
Products: NA
Alternate protein names: Mg-Chelatase Subunit ChlI-Like Protein; Mg-Chelatase Subunit ChlI-Like
Number of amino acids: Translated: 650; Mature: 650
Protein sequence:
>650_residues MVNIQSSLMKSLCCVALNSKLRSILLFDISINNLQQVAGILVSLLKVTTECEKVVPLKLGTFESEDNLWGQVGLGDELEK QAFNWQFGLFSSADNTNEIKLVIIPDLTKLSLAAMRACVVLMGADVAHLERHGQHKYWQPNFCWLVGCSSQNEEIGKISP HLLDRFALRLNIQQIENNDKRVTQIQKLLNSPEKPQKLLFEERKIEPELQEWLRQIRSSLPSMTPSALETILNYNYESNI YHRREIALARFASTYAQLEAADSVTVKHVDKVAKIMGLKLERNNINNSIDFKSFNPQPETEDNDFEPRRSPELSEIKDES LSNNPPEIPVYQSQVSNYFPDTDLPEITLLENPYIEDTTSLEREIDSLKLPTRISQSKTIHCGTILGLEKTTNANDLAIV RSLLEAAKFQKIRQKKQGNNYHKLKILPSDLYRYRRASVAEQMFMLLLDYTCLEYCQWEEKLLPYLSWAYSQRASVGLIQ VGIAPNSIVLDNNQSNVTINPVELRAKKISGQNILVPTIAMGLDLEKTKKGKATPLAHGFDLALKTLRHALQHGKNTVQK AVLVVVSDGRGNVPLEASHVGKIKPPVGKKGVEDALEVARKISNLGNLETIFLNPQSKQYPDLPLLLAKALGAKILSIPP VENWEITSHN
Sequences:
>Translated_650_residues MVNIQSSLMKSLCCVALNSKLRSILLFDISINNLQQVAGILVSLLKVTTECEKVVPLKLGTFESEDNLWGQVGLGDELEK QAFNWQFGLFSSADNTNEIKLVIIPDLTKLSLAAMRACVVLMGADVAHLERHGQHKYWQPNFCWLVGCSSQNEEIGKISP HLLDRFALRLNIQQIENNDKRVTQIQKLLNSPEKPQKLLFEERKIEPELQEWLRQIRSSLPSMTPSALETILNYNYESNI YHRREIALARFASTYAQLEAADSVTVKHVDKVAKIMGLKLERNNINNSIDFKSFNPQPETEDNDFEPRRSPELSEIKDES LSNNPPEIPVYQSQVSNYFPDTDLPEITLLENPYIEDTTSLEREIDSLKLPTRISQSKTIHCGTILGLEKTTNANDLAIV RSLLEAAKFQKIRQKKQGNNYHKLKILPSDLYRYRRASVAEQMFMLLLDYTCLEYCQWEEKLLPYLSWAYSQRASVGLIQ VGIAPNSIVLDNNQSNVTINPVELRAKKISGQNILVPTIAMGLDLEKTKKGKATPLAHGFDLALKTLRHALQHGKNTVQK AVLVVVSDGRGNVPLEASHVGKIKPPVGKKGVEDALEVARKISNLGNLETIFLNPQSKQYPDLPLLLAKALGAKILSIPP VENWEITSHN >Mature_650_residues MVNIQSSLMKSLCCVALNSKLRSILLFDISINNLQQVAGILVSLLKVTTECEKVVPLKLGTFESEDNLWGQVGLGDELEK QAFNWQFGLFSSADNTNEIKLVIIPDLTKLSLAAMRACVVLMGADVAHLERHGQHKYWQPNFCWLVGCSSQNEEIGKISP HLLDRFALRLNIQQIENNDKRVTQIQKLLNSPEKPQKLLFEERKIEPELQEWLRQIRSSLPSMTPSALETILNYNYESNI YHRREIALARFASTYAQLEAADSVTVKHVDKVAKIMGLKLERNNINNSIDFKSFNPQPETEDNDFEPRRSPELSEIKDES LSNNPPEIPVYQSQVSNYFPDTDLPEITLLENPYIEDTTSLEREIDSLKLPTRISQSKTIHCGTILGLEKTTNANDLAIV RSLLEAAKFQKIRQKKQGNNYHKLKILPSDLYRYRRASVAEQMFMLLLDYTCLEYCQWEEKLLPYLSWAYSQRASVGLIQ VGIAPNSIVLDNNQSNVTINPVELRAKKISGQNILVPTIAMGLDLEKTKKGKATPLAHGFDLALKTLRHALQHGKNTVQK AVLVVVSDGRGNVPLEASHVGKIKPPVGKKGVEDALEVARKISNLGNLETIFLNPQSKQYPDLPLLLAKALGAKILSIPP VENWEITSHN
Specific function: Unknown
COG id: COG1239
COG function: function code H; Mg-chelatase subunit ChlI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73196; Mature: 73196
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNIQSSLMKSLCCVALNSKLRSILLFDISINNLQQVAGILVSLLKVTTECEKVVPLKLG CCCCHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC TFESEDNLWGQVGLGDELEKQAFNWQFGLFSSADNTNEIKLVIIPDLTKLSLAAMRACVV CCCCCCCCEEECCCCHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHH LMGADVAHLERHGQHKYWQPNFCWLVGCSSQNEEIGKISPHLLDRFALRLNIQQIENNDK HHCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHEEHHHHCCCCH RVTQIQKLLNSPEKPQKLLFEERKIEPELQEWLRQIRSSLPSMTPSALETILNYNYESNI HHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC YHRREIALARFASTYAQLEAADSVTVKHVDKVAKIMGLKLERNNINNSIDFKSFNPQPET HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCC EDNDFEPRRSPELSEIKDESLSNNPPEIPVYQSQVSNYFPDTDLPEITLLENPYIEDTTS CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCHHH LEREIDSLKLPTRISQSKTIHCGTILGLEKTTNANDLAIVRSLLEAAKFQKIRQKKQGNN HHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC YHKLKILPSDLYRYRRASVAEQMFMLLLDYTCLEYCQWEEKLLPYLSWAYSQRASVGLIQ EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VGIAPNSIVLDNNQSNVTINPVELRAKKISGQNILVPTIAMGLDLEKTKKGKATPLAHGF EECCCCEEEEECCCCCEEECHHHHHHHHCCCCEEEEEHHHHCCCHHHCCCCCCCCCCCHH DLALKTLRHALQHGKNTVQKAVLVVVSDGRGNVPLEASHVGKIKPPVGKKGVEDALEVAR HHHHHHHHHHHHHCHHHHCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH KISNLGNLETIFLNPQSKQYPDLPLLLAKALGAKILSIPPVENWEITSHN HHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCEEEECCCCCCCEECCCC >Mature Secondary Structure MVNIQSSLMKSLCCVALNSKLRSILLFDISINNLQQVAGILVSLLKVTTECEKVVPLKLG CCCCHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC TFESEDNLWGQVGLGDELEKQAFNWQFGLFSSADNTNEIKLVIIPDLTKLSLAAMRACVV CCCCCCCCEEECCCCHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHH LMGADVAHLERHGQHKYWQPNFCWLVGCSSQNEEIGKISPHLLDRFALRLNIQQIENNDK HHCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHEEHHHHCCCCH RVTQIQKLLNSPEKPQKLLFEERKIEPELQEWLRQIRSSLPSMTPSALETILNYNYESNI HHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC YHRREIALARFASTYAQLEAADSVTVKHVDKVAKIMGLKLERNNINNSIDFKSFNPQPET HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCC EDNDFEPRRSPELSEIKDESLSNNPPEIPVYQSQVSNYFPDTDLPEITLLENPYIEDTTS CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCHHH LEREIDSLKLPTRISQSKTIHCGTILGLEKTTNANDLAIVRSLLEAAKFQKIRQKKQGNN HHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC YHKLKILPSDLYRYRRASVAEQMFMLLLDYTCLEYCQWEEKLLPYLSWAYSQRASVGLIQ EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VGIAPNSIVLDNNQSNVTINPVELRAKKISGQNILVPTIAMGLDLEKTKKGKATPLAHGF EECCCCEEEEECCCCCEEECHHHHHHHHCCCCEEEEEHHHHCCCHHHCCCCCCCCCCCHH DLALKTLRHALQHGKNTVQKAVLVVVSDGRGNVPLEASHVGKIKPPVGKKGVEDALEVAR HHHHHHHHHHHHHCHHHHCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH KISNLGNLETIFLNPQSKQYPDLPLLLAKALGAKILSIPPVENWEITSHN HHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCEEEECCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA