Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475805

Identifier: 113475805

GI number: 113475805

Start: 3370639

End: 3371970

Strand: Reverse

Name: 113475805

Synonym: Tery_2159

Alternate gene names: NA

Gene position: 3371970-3370639 (Counterclockwise)

Preceding gene: 113475806

Following gene: 113475804

Centisome position: 43.51

GC content: 29.8

Gene sequence:

>1332_bases
ATGAATCCAATTCAAAAGCTAAAAAATCAACAAAGTCCTTATCCAAGTAGATTATTTGCCCAAGGAGAATCTCCGGATAA
ATTACTCAATGATCAAGAATTAGAGCTGGAAAAAATTGAAGGGTTGACTGATAATAATAAAAGCTCACTTTCTGAGAGTT
TTGGCATTAAATTAGATGGAAAATTTGATTGGAAATTTGCTTTTTTAGAAGTAGAATCTCCTAATAATAATAATGATAAT
ATAATTATTCGCTGCCGTCACGGCTCGTTAAAAATAGGCGAACAATTACATACTGACCCTACTCCAGCTCCAAGAATATC
TTTTGATAACATTATCAATCTAAATCTAGAAGAAACTCCCGGTATAATGCGGATGTTTTCTCAGAAAAATTCTCAGGCTA
AAAAAATTAGGGGATGGCTACTGAAATTACAAGAAAAATTACAAGAAAGACAACATAATTTCTCTTATTTAATTATTAAT
GACCGTACAACTTTTGAAATTCCTTGGGAAATGTTGGAATTGAAAAATAATGATTATTTAGGAGCTTCTCTCGTTACAGT
CAGATGGCAAGATATTACAAATCCAGAAGATTTAGATAACGTTAATGGCTTCATTAATTTAGAAGTTACAGAAAAAAAAT
GTTGCGGTAAAATAGTAGCTTATCTAAATACTAAAGATTTACCCGAAGTTGAGCAAGAAAAGGAGATTATAGAAGTTTTT
CATTCGACTATTTATGACAATGTACGAAATTTTTTTGATGATTTAGATAAAGTTAATTTAGATCAAGTTAATTCAGAGGT
TAGTTTAGTTTTTATCGCCAGTCATGGTTTTTTTGATAAGGATTTATCTCAAAGTAAACTAGGAGAAAAAGATGAGACAC
AACAAATATCTGTATATGATTTATATGAATATGATTTTAATTTTTTCAAAAAAGGTTCAATTGTTTTTATGAATGCTTGT
AACTCTGGACGTTTACAACAAAATGATACTTTAAAAATTATTGATACTAACCCTACAATAGGACAAGAATATCCCATAGG
GTTTTCTACATTTTTCTTAGAAAAAGGAGCTGAGGGAGTCATAGGAACATTATGTGAAGTTTATGATACATATGCAGCTA
AAATTTCTCGTAATTTCTTTCAAGAATGTCAAAAATATCCCCATCTTTCTGTCGCTACAATTTTAAAAAATCTCCGACGG
AAAGCTGCTGATGAATATCAGCGTCAGAAAGGTAATGATGAGAATAAATATTTATTTATTTATACCTTTATGTATATTTA
TTATGGGAACCCTATGGCTAAATTGGAGCTTTTGAAAAAAGAAGGTATTTAA

Upstream 100 bases:

>100_bases
ATATTACTAGTTGTACCTCAGCAAGTTTGATATACTCAAAATACTGTGGAAGTTGCTATAGTTATTAGTTATTAGTTATT
AGTTATTAGTTATTAGTTTA

Downstream 100 bases:

>100_bases
ATATCAGCTTTTTTAATTATCTGTTATTTGTGATCTGTTTTTTTAATGACTTTTACTAATAATATACATAGTTATTCTCA
CATAATTATTATCATTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MNPIQKLKNQQSPYPSRLFAQGESPDKLLNDQELELEKIEGLTDNNKSSLSESFGIKLDGKFDWKFAFLEVESPNNNNDN
IIIRCRHGSLKIGEQLHTDPTPAPRISFDNIINLNLEETPGIMRMFSQKNSQAKKIRGWLLKLQEKLQERQHNFSYLIIN
DRTTFEIPWEMLELKNNDYLGASLVTVRWQDITNPEDLDNVNGFINLEVTEKKCCGKIVAYLNTKDLPEVEQEKEIIEVF
HSTIYDNVRNFFDDLDKVNLDQVNSEVSLVFIASHGFFDKDLSQSKLGEKDETQQISVYDLYEYDFNFFKKGSIVFMNAC
NSGRLQQNDTLKIIDTNPTIGQEYPIGFSTFFLEKGAEGVIGTLCEVYDTYAAKISRNFFQECQKYPHLSVATILKNLRR
KAADEYQRQKGNDENKYLFIYTFMYIYYGNPMAKLELLKKEGI

Sequences:

>Translated_443_residues
MNPIQKLKNQQSPYPSRLFAQGESPDKLLNDQELELEKIEGLTDNNKSSLSESFGIKLDGKFDWKFAFLEVESPNNNNDN
IIIRCRHGSLKIGEQLHTDPTPAPRISFDNIINLNLEETPGIMRMFSQKNSQAKKIRGWLLKLQEKLQERQHNFSYLIIN
DRTTFEIPWEMLELKNNDYLGASLVTVRWQDITNPEDLDNVNGFINLEVTEKKCCGKIVAYLNTKDLPEVEQEKEIIEVF
HSTIYDNVRNFFDDLDKVNLDQVNSEVSLVFIASHGFFDKDLSQSKLGEKDETQQISVYDLYEYDFNFFKKGSIVFMNAC
NSGRLQQNDTLKIIDTNPTIGQEYPIGFSTFFLEKGAEGVIGTLCEVYDTYAAKISRNFFQECQKYPHLSVATILKNLRR
KAADEYQRQKGNDENKYLFIYTFMYIYYGNPMAKLELLKKEGI
>Mature_443_residues
MNPIQKLKNQQSPYPSRLFAQGESPDKLLNDQELELEKIEGLTDNNKSSLSESFGIKLDGKFDWKFAFLEVESPNNNNDN
IIIRCRHGSLKIGEQLHTDPTPAPRISFDNIINLNLEETPGIMRMFSQKNSQAKKIRGWLLKLQEKLQERQHNFSYLIIN
DRTTFEIPWEMLELKNNDYLGASLVTVRWQDITNPEDLDNVNGFINLEVTEKKCCGKIVAYLNTKDLPEVEQEKEIIEVF
HSTIYDNVRNFFDDLDKVNLDQVNSEVSLVFIASHGFFDKDLSQSKLGEKDETQQISVYDLYEYDFNFFKKGSIVFMNAC
NSGRLQQNDTLKIIDTNPTIGQEYPIGFSTFFLEKGAEGVIGTLCEVYDTYAAKISRNFFQECQKYPHLSVATILKNLRR
KAADEYQRQKGNDENKYLFIYTFMYIYYGNPMAKLELLKKEGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51361; Mature: 51361

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPIQKLKNQQSPYPSRLFAQGESPDKLLNDQELELEKIEGLTDNNKSSLSESFGIKLDG
CCHHHHHHCCCCCCCHHHEECCCCHHHHCCCCCCHHHHHCCCCCCCHHHHHHHCCEEECC
KFDWKFAFLEVESPNNNNDNIIIRCRHGSLKIGEQLHTDPTPAPRISFDNIINLNLEETP
EEEEEEEEEEEECCCCCCCEEEEEEECCCEECCHHHCCCCCCCCCCCCCCEEEECCCCCC
GIMRMFSQKNSQAKKIRGWLLKLQEKLQERQHNFSYLIINDRTTFEIPWEMLELKNNDYL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCHHHEEECCCCCC
GASLVTVRWQDITNPEDLDNVNGFINLEVTEKKCCGKIVAYLNTKDLPEVEQEKEIIEVF
CEEEEEEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
HSTIYDNVRNFFDDLDKVNLDQVNSEVSLVFIASHGFFDKDLSQSKLGEKDETQQISVYD
HHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEEECCCCCCCCCHHHCCCCCCCCEEEEEE
LYEYDFNFFKKGSIVFMNACNSGRLQQNDTLKIIDTNPTIGQEYPIGFSTFFLEKGAEGV
EEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCHH
IGTLCEVYDTYAAKISRNFFQECQKYPHLSVATILKNLRRKAADEYQRQKGNDENKYLFI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
YTFMYIYYGNPMAKLELLKKEGI
EEEEHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MNPIQKLKNQQSPYPSRLFAQGESPDKLLNDQELELEKIEGLTDNNKSSLSESFGIKLDG
CCHHHHHHCCCCCCCHHHEECCCCHHHHCCCCCCHHHHHCCCCCCCHHHHHHHCCEEECC
KFDWKFAFLEVESPNNNNDNIIIRCRHGSLKIGEQLHTDPTPAPRISFDNIINLNLEETP
EEEEEEEEEEEECCCCCCCEEEEEEECCCEECCHHHCCCCCCCCCCCCCCEEEECCCCCC
GIMRMFSQKNSQAKKIRGWLLKLQEKLQERQHNFSYLIINDRTTFEIPWEMLELKNNDYL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCHHHEEECCCCCC
GASLVTVRWQDITNPEDLDNVNGFINLEVTEKKCCGKIVAYLNTKDLPEVEQEKEIIEVF
CEEEEEEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
HSTIYDNVRNFFDDLDKVNLDQVNSEVSLVFIASHGFFDKDLSQSKLGEKDETQQISVYD
HHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEEECCCCCCCCCHHHCCCCCCCCEEEEEE
LYEYDFNFFKKGSIVFMNACNSGRLQQNDTLKIIDTNPTIGQEYPIGFSTFFLEKGAEGV
EEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCHH
IGTLCEVYDTYAAKISRNFFQECQKYPHLSVATILKNLRRKAADEYQRQKGNDENKYLFI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
YTFMYIYYGNPMAKLELLKKEGI
EEEEHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA