| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475729
Identifier: 113475729
GI number: 113475729
Start: 3241214
End: 3243199
Strand: Reverse
Name: 113475729
Synonym: Tery_2076
Alternate gene names: NA
Gene position: 3243199-3241214 (Counterclockwise)
Preceding gene: 113475730
Following gene: 113475728
Centisome position: 41.85
GC content: 34.34
Gene sequence:
>1986_bases ATGTTATATAATTTCAGACTCAGAAAAGTCATTCGGGAATTACTTAATCAAGATCTACCCGAAGAAGAATTTAACGACTT AGTTTATGATTATTTTCCTGATGTTTATAACCAATTTACAAATGGACAAAATAAAAAGCAAAGAGTCAGAATTTTAATTG AATATGCTGACAAACATAGAGAAATTGAGCGGTTACTTGAAGGCATTAAAAATATTAATCCAAAAGTTTATCAAGAGTAT GAGTCAAAATTAGGAGAAAATCCCCCTCCGCCTCCAATTGAAAAATGTGATGTTTTGGTTTTAGCAGCAAACCCTACAAC TACACAGCCACTACAATTAAAAAAAGAAACTGAATTAATTAGGGAAAAACTACAGCAGACAGAATTTGGAAAAAATTATA TTGTTTATGGAGAAGAAAATGCTTTTATAGAAGATTTATCTCAATATTTGCTGAAATATGAGCCTAGAATTCTTCACTTT AGCGGTCATGGTAATTCTCAAGGTGAAATAATTTTAAACAACCGTCAAGGTGAGGCAGAGGTTTTATCCCTCGAAACATT ATCAGAATTATTATCTATTGTTAGAAAAGATGGAAAACCTATAGAATGTGTTGTATTTAATGCCTGTTTTTCTCTGAAAA AAGCTGATGCAGTCGCTCACCAGGTAGGTTGTGTTATTGGCATGAAAAAAGAGATTGGTGATGATTCTGCTTTGATATTT GCCGAAGAATTTTATCAAGGTTTAGCATATCAAAGGAGCTATTATCAAGCTTTTCAACTAGGTATAAATGGAATTGAACG CTTAAGATTACCTGATAGTCCAATTCCTCATTTTATTCCTTTTGATACATCATTATTAGAGTCAGAAACTGTCAGTTTAA GAAGTCATCAAACCAACGGTTATTTGACTTCAAAAGAAGCCGTAACAAAGAAAGCAATAAAGAAAAAAGAAACCGTAAAA GTCAAAAGATCTCTGATTTTAAAAGATACTAAAGAAACAACAGCAACTATATATCCTTTATGGTTTGGTACCAACAGAAA ACCTGTAGATACAAATAATATATCCAAAGGTTTTTCCGGAAAAAGAGATGACAAACTTCACTATGGTATTTGTCAAGTAG CTGTTCCTAAATCTCATAAAATAGGCTCTATAGGTTCCCCTTTGTGGAAAAGATTAATTACTTTCAAAGACGATCGCCTC AAACTACATTTTCAAAGTTTGCAAATTCTGGAAAAAGAACTATTTTGGGAAAATATCAACGAAGAATTAAAAGACCATGA AATAAATGAAAGGTCTGCTTTAGTCTTTGTTCATGGATACAACGTCAATTTTGAAGATGCAGCTATTAGAGCCGCACAAA TGGGGTTTGACCTGCAAGTGCCAGGAATTACAGCCTTTTATAGTTGGCCATCTCAAGGGAAATTATCAGCATATCCGGTA GACGAGGCAAGTATTGAAGCCAGCGAAAAGTACATGACAGAATTTTTACTCAACCTAGCCGAAAAAACGGACATTGAGAA AATTCATATTATTGCTCATAGTATGGGAAACCGAGGTTTACTCAGAGCAGTCCAAAGAATTATTTCTCAAGTTCAAACAA TAACTAATATTGCTTTTGGGCAAATTATTTTAGCCGCTCCAGATGTAGATATTGACTTGTTTAAAGAGTTAGCTAAAGGA TATCATCAATTAGCAGAACGAACTACATTATACATATCATCAAAAGACAAAGCCTTAGCAACTTCAGCGCTTATTCATCA GCATGGCCGAGCTGGTTTTTTCCCCCCTGTTACTGTTGTAGAAGGAATAGACACGGTAAAAGTTTCTAAGATAGATTTAA CTTTATTAGGACATGGTTATTTTGCTGATGCTCGTTTGGTACTTGAAGATATACGGGACTTATTAATTAATAATACTTCC CCAGGGCAGCGAAGAGGTCGGTTAGAACCGTCGGAAGAGGGGGGTTATTGGATTATGCGGCAGTAA
Upstream 100 bases:
>100_bases ACTGATTTGCAGTTGCCCATGACCGACAGCAAATTTCTAGCTTTGTCTAGTTTTCCAGAAGCCGTCGGAGTTCACCTAAT AATTAATACTTAAAAAGCGT
Downstream 100 bases:
>100_bases GATATTTTAGTTATTAGTTATCATTTTGTTTGGTGATTAATTAGTCTATTACATTGTTTTTTTATTTGTTTGTTTATAAT GAAATATGATCTTAAACTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 661; Mature: 661
Protein sequence:
>661_residues MLYNFRLRKVIRELLNQDLPEEEFNDLVYDYFPDVYNQFTNGQNKKQRVRILIEYADKHREIERLLEGIKNINPKVYQEY ESKLGENPPPPPIEKCDVLVLAANPTTTQPLQLKKETELIREKLQQTEFGKNYIVYGEENAFIEDLSQYLLKYEPRILHF SGHGNSQGEIILNNRQGEAEVLSLETLSELLSIVRKDGKPIECVVFNACFSLKKADAVAHQVGCVIGMKKEIGDDSALIF AEEFYQGLAYQRSYYQAFQLGINGIERLRLPDSPIPHFIPFDTSLLESETVSLRSHQTNGYLTSKEAVTKKAIKKKETVK VKRSLILKDTKETTATIYPLWFGTNRKPVDTNNISKGFSGKRDDKLHYGICQVAVPKSHKIGSIGSPLWKRLITFKDDRL KLHFQSLQILEKELFWENINEELKDHEINERSALVFVHGYNVNFEDAAIRAAQMGFDLQVPGITAFYSWPSQGKLSAYPV DEASIEASEKYMTEFLLNLAEKTDIEKIHIIAHSMGNRGLLRAVQRIISQVQTITNIAFGQIILAAPDVDIDLFKELAKG YHQLAERTTLYISSKDKALATSALIHQHGRAGFFPPVTVVEGIDTVKVSKIDLTLLGHGYFADARLVLEDIRDLLINNTS PGQRRGRLEPSEEGGYWIMRQ
Sequences:
>Translated_661_residues MLYNFRLRKVIRELLNQDLPEEEFNDLVYDYFPDVYNQFTNGQNKKQRVRILIEYADKHREIERLLEGIKNINPKVYQEY ESKLGENPPPPPIEKCDVLVLAANPTTTQPLQLKKETELIREKLQQTEFGKNYIVYGEENAFIEDLSQYLLKYEPRILHF SGHGNSQGEIILNNRQGEAEVLSLETLSELLSIVRKDGKPIECVVFNACFSLKKADAVAHQVGCVIGMKKEIGDDSALIF AEEFYQGLAYQRSYYQAFQLGINGIERLRLPDSPIPHFIPFDTSLLESETVSLRSHQTNGYLTSKEAVTKKAIKKKETVK VKRSLILKDTKETTATIYPLWFGTNRKPVDTNNISKGFSGKRDDKLHYGICQVAVPKSHKIGSIGSPLWKRLITFKDDRL KLHFQSLQILEKELFWENINEELKDHEINERSALVFVHGYNVNFEDAAIRAAQMGFDLQVPGITAFYSWPSQGKLSAYPV DEASIEASEKYMTEFLLNLAEKTDIEKIHIIAHSMGNRGLLRAVQRIISQVQTITNIAFGQIILAAPDVDIDLFKELAKG YHQLAERTTLYISSKDKALATSALIHQHGRAGFFPPVTVVEGIDTVKVSKIDLTLLGHGYFADARLVLEDIRDLLINNTS PGQRRGRLEPSEEGGYWIMRQ >Mature_661_residues MLYNFRLRKVIRELLNQDLPEEEFNDLVYDYFPDVYNQFTNGQNKKQRVRILIEYADKHREIERLLEGIKNINPKVYQEY ESKLGENPPPPPIEKCDVLVLAANPTTTQPLQLKKETELIREKLQQTEFGKNYIVYGEENAFIEDLSQYLLKYEPRILHF SGHGNSQGEIILNNRQGEAEVLSLETLSELLSIVRKDGKPIECVVFNACFSLKKADAVAHQVGCVIGMKKEIGDDSALIF AEEFYQGLAYQRSYYQAFQLGINGIERLRLPDSPIPHFIPFDTSLLESETVSLRSHQTNGYLTSKEAVTKKAIKKKETVK VKRSLILKDTKETTATIYPLWFGTNRKPVDTNNISKGFSGKRDDKLHYGICQVAVPKSHKIGSIGSPLWKRLITFKDDRL KLHFQSLQILEKELFWENINEELKDHEINERSALVFVHGYNVNFEDAAIRAAQMGFDLQVPGITAFYSWPSQGKLSAYPV DEASIEASEKYMTEFLLNLAEKTDIEKIHIIAHSMGNRGLLRAVQRIISQVQTITNIAFGQIILAAPDVDIDLFKELAKG YHQLAERTTLYISSKDKALATSALIHQHGRAGFFPPVTVVEGIDTVKVSKIDLTLLGHGYFADARLVLEDIRDLLINNTS PGQRRGRLEPSEEGGYWIMRQ
Specific function: Unknown
COG id: COG4782
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75339; Mature: 75339
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYNFRLRKVIRELLNQDLPEEEFNDLVYDYFPDVYNQFTNGQNKKQRVRILIEYADKHR CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH EIERLLEGIKNINPKVYQEYESKLGENPPPPPIEKCDVLVLAANPTTTQPLQLKKETELI HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH REKLQQTEFGKNYIVYGEENAFIEDLSQYLLKYEPRILHFSGHGNSQGEIILNNRQGEAE HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCHH VLSLETLSELLSIVRKDGKPIECVVFNACFSLKKADAVAHQVGCVIGMKKEIGDDSALIF HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHEECHHHCCCCCEEEE AEEFYQGLAYQRSYYQAFQLGINGIERLRLPDSPIPHFIPFDTSLLESETVSLRSHQTNG HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC YLTSKEAVTKKAIKKKETVKVKRSLILKDTKETTATIYPLWFGTNRKPVDTNNISKGFSG EEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC KRDDKLHYGICQVAVPKSHKIGSIGSPLWKRLITFKDDRLKLHFQSLQILEKELFWENIN CCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH EELKDHEINERSALVFVHGYNVNFEDAAIRAAQMGFDLQVPGITAFYSWPSQGKLSAYPV HHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEECCCEEEEECCCCCCCEEECCC DEASIEASEKYMTEFLLNLAEKTDIEKIHIIAHSMGNRGLLRAVQRIISQVQTITNIAFG CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC QIILAAPDVDIDLFKELAKGYHQLAERTTLYISSKDKALATSALIHQHGRAGFFPPVTVV EEEEECCCCCHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHH EGIDTVKVSKIDLTLLGHGYFADARLVLEDIRDLLINNTSPGQRRGRLEPSEEGGYWIMR CCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEE Q C >Mature Secondary Structure MLYNFRLRKVIRELLNQDLPEEEFNDLVYDYFPDVYNQFTNGQNKKQRVRILIEYADKHR CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH EIERLLEGIKNINPKVYQEYESKLGENPPPPPIEKCDVLVLAANPTTTQPLQLKKETELI HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH REKLQQTEFGKNYIVYGEENAFIEDLSQYLLKYEPRILHFSGHGNSQGEIILNNRQGEAE HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCHH VLSLETLSELLSIVRKDGKPIECVVFNACFSLKKADAVAHQVGCVIGMKKEIGDDSALIF HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHEECHHHCCCCCEEEE AEEFYQGLAYQRSYYQAFQLGINGIERLRLPDSPIPHFIPFDTSLLESETVSLRSHQTNG HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC YLTSKEAVTKKAIKKKETVKVKRSLILKDTKETTATIYPLWFGTNRKPVDTNNISKGFSG EEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC KRDDKLHYGICQVAVPKSHKIGSIGSPLWKRLITFKDDRLKLHFQSLQILEKELFWENIN CCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH EELKDHEINERSALVFVHGYNVNFEDAAIRAAQMGFDLQVPGITAFYSWPSQGKLSAYPV HHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEECCCEEEEECCCCCCCEEECCC DEASIEASEKYMTEFLLNLAEKTDIEKIHIIAHSMGNRGLLRAVQRIISQVQTITNIAFG CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC QIILAAPDVDIDLFKELAKGYHQLAERTTLYISSKDKALATSALIHQHGRAGFFPPVTVV EEEEECCCCCHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHH EGIDTVKVSKIDLTLLGHGYFADARLVLEDIRDLLINNTSPGQRRGRLEPSEEGGYWIMR CCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEE Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA