Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475729

Identifier: 113475729

GI number: 113475729

Start: 3241214

End: 3243199

Strand: Reverse

Name: 113475729

Synonym: Tery_2076

Alternate gene names: NA

Gene position: 3243199-3241214 (Counterclockwise)

Preceding gene: 113475730

Following gene: 113475728

Centisome position: 41.85

GC content: 34.34

Gene sequence:

>1986_bases
ATGTTATATAATTTCAGACTCAGAAAAGTCATTCGGGAATTACTTAATCAAGATCTACCCGAAGAAGAATTTAACGACTT
AGTTTATGATTATTTTCCTGATGTTTATAACCAATTTACAAATGGACAAAATAAAAAGCAAAGAGTCAGAATTTTAATTG
AATATGCTGACAAACATAGAGAAATTGAGCGGTTACTTGAAGGCATTAAAAATATTAATCCAAAAGTTTATCAAGAGTAT
GAGTCAAAATTAGGAGAAAATCCCCCTCCGCCTCCAATTGAAAAATGTGATGTTTTGGTTTTAGCAGCAAACCCTACAAC
TACACAGCCACTACAATTAAAAAAAGAAACTGAATTAATTAGGGAAAAACTACAGCAGACAGAATTTGGAAAAAATTATA
TTGTTTATGGAGAAGAAAATGCTTTTATAGAAGATTTATCTCAATATTTGCTGAAATATGAGCCTAGAATTCTTCACTTT
AGCGGTCATGGTAATTCTCAAGGTGAAATAATTTTAAACAACCGTCAAGGTGAGGCAGAGGTTTTATCCCTCGAAACATT
ATCAGAATTATTATCTATTGTTAGAAAAGATGGAAAACCTATAGAATGTGTTGTATTTAATGCCTGTTTTTCTCTGAAAA
AAGCTGATGCAGTCGCTCACCAGGTAGGTTGTGTTATTGGCATGAAAAAAGAGATTGGTGATGATTCTGCTTTGATATTT
GCCGAAGAATTTTATCAAGGTTTAGCATATCAAAGGAGCTATTATCAAGCTTTTCAACTAGGTATAAATGGAATTGAACG
CTTAAGATTACCTGATAGTCCAATTCCTCATTTTATTCCTTTTGATACATCATTATTAGAGTCAGAAACTGTCAGTTTAA
GAAGTCATCAAACCAACGGTTATTTGACTTCAAAAGAAGCCGTAACAAAGAAAGCAATAAAGAAAAAAGAAACCGTAAAA
GTCAAAAGATCTCTGATTTTAAAAGATACTAAAGAAACAACAGCAACTATATATCCTTTATGGTTTGGTACCAACAGAAA
ACCTGTAGATACAAATAATATATCCAAAGGTTTTTCCGGAAAAAGAGATGACAAACTTCACTATGGTATTTGTCAAGTAG
CTGTTCCTAAATCTCATAAAATAGGCTCTATAGGTTCCCCTTTGTGGAAAAGATTAATTACTTTCAAAGACGATCGCCTC
AAACTACATTTTCAAAGTTTGCAAATTCTGGAAAAAGAACTATTTTGGGAAAATATCAACGAAGAATTAAAAGACCATGA
AATAAATGAAAGGTCTGCTTTAGTCTTTGTTCATGGATACAACGTCAATTTTGAAGATGCAGCTATTAGAGCCGCACAAA
TGGGGTTTGACCTGCAAGTGCCAGGAATTACAGCCTTTTATAGTTGGCCATCTCAAGGGAAATTATCAGCATATCCGGTA
GACGAGGCAAGTATTGAAGCCAGCGAAAAGTACATGACAGAATTTTTACTCAACCTAGCCGAAAAAACGGACATTGAGAA
AATTCATATTATTGCTCATAGTATGGGAAACCGAGGTTTACTCAGAGCAGTCCAAAGAATTATTTCTCAAGTTCAAACAA
TAACTAATATTGCTTTTGGGCAAATTATTTTAGCCGCTCCAGATGTAGATATTGACTTGTTTAAAGAGTTAGCTAAAGGA
TATCATCAATTAGCAGAACGAACTACATTATACATATCATCAAAAGACAAAGCCTTAGCAACTTCAGCGCTTATTCATCA
GCATGGCCGAGCTGGTTTTTTCCCCCCTGTTACTGTTGTAGAAGGAATAGACACGGTAAAAGTTTCTAAGATAGATTTAA
CTTTATTAGGACATGGTTATTTTGCTGATGCTCGTTTGGTACTTGAAGATATACGGGACTTATTAATTAATAATACTTCC
CCAGGGCAGCGAAGAGGTCGGTTAGAACCGTCGGAAGAGGGGGGTTATTGGATTATGCGGCAGTAA

Upstream 100 bases:

>100_bases
ACTGATTTGCAGTTGCCCATGACCGACAGCAAATTTCTAGCTTTGTCTAGTTTTCCAGAAGCCGTCGGAGTTCACCTAAT
AATTAATACTTAAAAAGCGT

Downstream 100 bases:

>100_bases
GATATTTTAGTTATTAGTTATCATTTTGTTTGGTGATTAATTAGTCTATTACATTGTTTTTTTATTTGTTTGTTTATAAT
GAAATATGATCTTAAACTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MLYNFRLRKVIRELLNQDLPEEEFNDLVYDYFPDVYNQFTNGQNKKQRVRILIEYADKHREIERLLEGIKNINPKVYQEY
ESKLGENPPPPPIEKCDVLVLAANPTTTQPLQLKKETELIREKLQQTEFGKNYIVYGEENAFIEDLSQYLLKYEPRILHF
SGHGNSQGEIILNNRQGEAEVLSLETLSELLSIVRKDGKPIECVVFNACFSLKKADAVAHQVGCVIGMKKEIGDDSALIF
AEEFYQGLAYQRSYYQAFQLGINGIERLRLPDSPIPHFIPFDTSLLESETVSLRSHQTNGYLTSKEAVTKKAIKKKETVK
VKRSLILKDTKETTATIYPLWFGTNRKPVDTNNISKGFSGKRDDKLHYGICQVAVPKSHKIGSIGSPLWKRLITFKDDRL
KLHFQSLQILEKELFWENINEELKDHEINERSALVFVHGYNVNFEDAAIRAAQMGFDLQVPGITAFYSWPSQGKLSAYPV
DEASIEASEKYMTEFLLNLAEKTDIEKIHIIAHSMGNRGLLRAVQRIISQVQTITNIAFGQIILAAPDVDIDLFKELAKG
YHQLAERTTLYISSKDKALATSALIHQHGRAGFFPPVTVVEGIDTVKVSKIDLTLLGHGYFADARLVLEDIRDLLINNTS
PGQRRGRLEPSEEGGYWIMRQ

Sequences:

>Translated_661_residues
MLYNFRLRKVIRELLNQDLPEEEFNDLVYDYFPDVYNQFTNGQNKKQRVRILIEYADKHREIERLLEGIKNINPKVYQEY
ESKLGENPPPPPIEKCDVLVLAANPTTTQPLQLKKETELIREKLQQTEFGKNYIVYGEENAFIEDLSQYLLKYEPRILHF
SGHGNSQGEIILNNRQGEAEVLSLETLSELLSIVRKDGKPIECVVFNACFSLKKADAVAHQVGCVIGMKKEIGDDSALIF
AEEFYQGLAYQRSYYQAFQLGINGIERLRLPDSPIPHFIPFDTSLLESETVSLRSHQTNGYLTSKEAVTKKAIKKKETVK
VKRSLILKDTKETTATIYPLWFGTNRKPVDTNNISKGFSGKRDDKLHYGICQVAVPKSHKIGSIGSPLWKRLITFKDDRL
KLHFQSLQILEKELFWENINEELKDHEINERSALVFVHGYNVNFEDAAIRAAQMGFDLQVPGITAFYSWPSQGKLSAYPV
DEASIEASEKYMTEFLLNLAEKTDIEKIHIIAHSMGNRGLLRAVQRIISQVQTITNIAFGQIILAAPDVDIDLFKELAKG
YHQLAERTTLYISSKDKALATSALIHQHGRAGFFPPVTVVEGIDTVKVSKIDLTLLGHGYFADARLVLEDIRDLLINNTS
PGQRRGRLEPSEEGGYWIMRQ
>Mature_661_residues
MLYNFRLRKVIRELLNQDLPEEEFNDLVYDYFPDVYNQFTNGQNKKQRVRILIEYADKHREIERLLEGIKNINPKVYQEY
ESKLGENPPPPPIEKCDVLVLAANPTTTQPLQLKKETELIREKLQQTEFGKNYIVYGEENAFIEDLSQYLLKYEPRILHF
SGHGNSQGEIILNNRQGEAEVLSLETLSELLSIVRKDGKPIECVVFNACFSLKKADAVAHQVGCVIGMKKEIGDDSALIF
AEEFYQGLAYQRSYYQAFQLGINGIERLRLPDSPIPHFIPFDTSLLESETVSLRSHQTNGYLTSKEAVTKKAIKKKETVK
VKRSLILKDTKETTATIYPLWFGTNRKPVDTNNISKGFSGKRDDKLHYGICQVAVPKSHKIGSIGSPLWKRLITFKDDRL
KLHFQSLQILEKELFWENINEELKDHEINERSALVFVHGYNVNFEDAAIRAAQMGFDLQVPGITAFYSWPSQGKLSAYPV
DEASIEASEKYMTEFLLNLAEKTDIEKIHIIAHSMGNRGLLRAVQRIISQVQTITNIAFGQIILAAPDVDIDLFKELAKG
YHQLAERTTLYISSKDKALATSALIHQHGRAGFFPPVTVVEGIDTVKVSKIDLTLLGHGYFADARLVLEDIRDLLINNTS
PGQRRGRLEPSEEGGYWIMRQ

Specific function: Unknown

COG id: COG4782

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75339; Mature: 75339

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYNFRLRKVIRELLNQDLPEEEFNDLVYDYFPDVYNQFTNGQNKKQRVRILIEYADKHR
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EIERLLEGIKNINPKVYQEYESKLGENPPPPPIEKCDVLVLAANPTTTQPLQLKKETELI
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH
REKLQQTEFGKNYIVYGEENAFIEDLSQYLLKYEPRILHFSGHGNSQGEIILNNRQGEAE
HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCHH
VLSLETLSELLSIVRKDGKPIECVVFNACFSLKKADAVAHQVGCVIGMKKEIGDDSALIF
HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHEECHHHCCCCCEEEE
AEEFYQGLAYQRSYYQAFQLGINGIERLRLPDSPIPHFIPFDTSLLESETVSLRSHQTNG
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
YLTSKEAVTKKAIKKKETVKVKRSLILKDTKETTATIYPLWFGTNRKPVDTNNISKGFSG
EEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
KRDDKLHYGICQVAVPKSHKIGSIGSPLWKRLITFKDDRLKLHFQSLQILEKELFWENIN
CCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH
EELKDHEINERSALVFVHGYNVNFEDAAIRAAQMGFDLQVPGITAFYSWPSQGKLSAYPV
HHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEECCCEEEEECCCCCCCEEECCC
DEASIEASEKYMTEFLLNLAEKTDIEKIHIIAHSMGNRGLLRAVQRIISQVQTITNIAFG
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
QIILAAPDVDIDLFKELAKGYHQLAERTTLYISSKDKALATSALIHQHGRAGFFPPVTVV
EEEEECCCCCHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHH
EGIDTVKVSKIDLTLLGHGYFADARLVLEDIRDLLINNTSPGQRRGRLEPSEEGGYWIMR
CCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEE
Q
C
>Mature Secondary Structure
MLYNFRLRKVIRELLNQDLPEEEFNDLVYDYFPDVYNQFTNGQNKKQRVRILIEYADKHR
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EIERLLEGIKNINPKVYQEYESKLGENPPPPPIEKCDVLVLAANPTTTQPLQLKKETELI
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH
REKLQQTEFGKNYIVYGEENAFIEDLSQYLLKYEPRILHFSGHGNSQGEIILNNRQGEAE
HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCHH
VLSLETLSELLSIVRKDGKPIECVVFNACFSLKKADAVAHQVGCVIGMKKEIGDDSALIF
HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHEECHHHCCCCCEEEE
AEEFYQGLAYQRSYYQAFQLGINGIERLRLPDSPIPHFIPFDTSLLESETVSLRSHQTNG
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
YLTSKEAVTKKAIKKKETVKVKRSLILKDTKETTATIYPLWFGTNRKPVDTNNISKGFSG
EEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
KRDDKLHYGICQVAVPKSHKIGSIGSPLWKRLITFKDDRLKLHFQSLQILEKELFWENIN
CCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH
EELKDHEINERSALVFVHGYNVNFEDAAIRAAQMGFDLQVPGITAFYSWPSQGKLSAYPV
HHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEECCCEEEEECCCCCCCEEECCC
DEASIEASEKYMTEFLLNLAEKTDIEKIHIIAHSMGNRGLLRAVQRIISQVQTITNIAFG
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
QIILAAPDVDIDLFKELAKGYHQLAERTTLYISSKDKALATSALIHQHGRAGFFPPVTVV
EEEEECCCCCHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHH
EGIDTVKVSKIDLTLLGHGYFADARLVLEDIRDLLINNTSPGQRRGRLEPSEEGGYWIMR
CCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEE
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA