Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475684

Identifier: 113475684

GI number: 113475684

Start: 3152928

End: 3153203

Strand: Reverse

Name: 113475684

Synonym: Tery_2025

Alternate gene names: NA

Gene position: 3153203-3152928 (Counterclockwise)

Preceding gene: 113475687

Following gene: 113475682

Centisome position: 40.69

GC content: 40.22

Gene sequence:

>276_bases
TTGGTTGTTAATAATCTCAGATACATAAGATTATTCAAAGACCCCCTGACTTTCGTCCTAAACTCCTTAGCTACCTTTGA
AGTTGTTACTAATAACGAGAGTTTAATTACCTTCCTATTCGTCCACTTGTCAGCCTTTGCTAGAAGTCTCACTCATTTGG
TAGTTAGAGCTTTGACCCCATTTAGACCAGCTTTAGGGATTGATGTTCAGTCTCTACCCTATGGCCTATGCTGTCAACCC
AACAACAAGGTGGATGGAATTTCACCATCAAGGTAA

Upstream 100 bases:

>100_bases
TTTCGACCTATTTACTTAGGTGTCTTAAATAGGTTTCCTCGTTCCATTATTCCTTTATTTCGATTGATTTAGTGGGGTAA
ATTCTCCCGGAGGGTTCGGC

Downstream 100 bases:

>100_bases
TAAGAGTTATTCACAAGTCGAGGTTGTCCTCATGTGATGACTTTGAACGGCCATTTATACCCAGTTTCCTGGTTTAGTGG
CCAACGAGTCGCACGTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MVVNNLRYIRLFKDPLTFVLNSLATFEVVTNNESLITFLFVHLSAFARSLTHLVVRALTPFRPALGIDVQSLPYGLCCQP
NNKVDGISPSR

Sequences:

>Translated_91_residues
MVVNNLRYIRLFKDPLTFVLNSLATFEVVTNNESLITFLFVHLSAFARSLTHLVVRALTPFRPALGIDVQSLPYGLCCQP
NNKVDGISPSR
>Mature_91_residues
MVVNNLRYIRLFKDPLTFVLNSLATFEVVTNNESLITFLFVHLSAFARSLTHLVVRALTPFRPALGIDVQSLPYGLCCQP
NNKVDGISPSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10192; Mature: 10192

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVNNLRYIRLFKDPLTFVLNSLATFEVVTNNESLITFLFVHLSAFARSLTHLVVRALTP
CCCCCEEEEEEHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
FRPALGIDVQSLPYGLCCQPNNKVDGISPSR
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MVVNNLRYIRLFKDPLTFVLNSLATFEVVTNNESLITFLFVHLSAFARSLTHLVVRALTP
CCCCCEEEEEEHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
FRPALGIDVQSLPYGLCCQPNNKVDGISPSR
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA