Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475645

Identifier: 113475645

GI number: 113475645

Start: 3090771

End: 3091517

Strand: Reverse

Name: 113475645

Synonym: Tery_1982

Alternate gene names: NA

Gene position: 3091517-3090771 (Counterclockwise)

Preceding gene: 113475646

Following gene: 113475644

Centisome position: 39.89

GC content: 42.84

Gene sequence:

>747_bases
GTGGGAGTCGTCTATATAGGCGATCGCGCGGTAGGCAAAACTCATTTAGCCCTAGAATTAGTTAATCCCCAGGGGCAATA
CGTCCAGGTTTCTATGGTGGGCCAAACTTATCAAAACCTTAAGGCCAATCTCCTGAATAGCGATGGAACGGCCAAACAAA
CTCAAAACATCCAATATCGTCCCCTAAACCTCCAAGTACGGTTGCCTAGTGGTTTAAACGAAGTTCCCGTAGATTGGATC
GACTCTCCAGGGGAAATCTTTCGTAGGTCTTGGCAGTGGGAACACCCCCAGGAATGGGAATCTTTTCAAGAAATTGTCCG
GCAAAGCGAGGGGGTTTTGCTGATTTTGCCACCTTATCGGGAAATATTGTTGCCTAATCTGGAGGTGACAAATTTTGTGA
CTCAAAAGCAGTGGTGTAATGGCTTTGAGAGTTGGGCTAGATTTTTTTGTGATGATTGTCCTAAGGCCAAGCATATTGTT
ATTTGTCTGAACAAGGCGGATCTAATAAATTGCAATCTCTCTGAGGAGTCGGAAAGGTTGGCTTATCGACCAGATGGTTC
TTCGATGAATTGGCTTCAGCGTCATAATTATGTAGTTAATAGTTATTTTCGATTGGTAAAATCCCAAATAGCACAAATAA
ATAGGAGTCGGCCTGGGTTATCAGTTCGCTGTTTTATTACCAGTATCTATGATCGTAGTTTGCTGGAGTTGCCCTGGATC
TATTTAGCTAGTTATTTAGCTAATTAA

Upstream 100 bases:

>100_bases
GAACTCTTCGTGCCTCCTAACTCCTGTTGAGAGCCCCCTCGCTTCTTTGTTCAATTTGATATAATATGAAAATTTTAAAT
TAAAAGCAGGGAGGATCAAG

Downstream 100 bases:

>100_bases
TGGAGGAGGAAATATGGGAAATATTTGTATTATCGGACCGAGGAGTTCTGGCAAAACAACTTATCTGGCAGGACTGGCAT
ATTGGCCGGATACTCATAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MGVVYIGDRAVGKTHLALELVNPQGQYVQVSMVGQTYQNLKANLLNSDGTAKQTQNIQYRPLNLQVRLPSGLNEVPVDWI
DSPGEIFRRSWQWEHPQEWESFQEIVRQSEGVLLILPPYREILLPNLEVTNFVTQKQWCNGFESWARFFCDDCPKAKHIV
ICLNKADLINCNLSEESERLAYRPDGSSMNWLQRHNYVVNSYFRLVKSQIAQINRSRPGLSVRCFITSIYDRSLLELPWI
YLASYLAN

Sequences:

>Translated_248_residues
MGVVYIGDRAVGKTHLALELVNPQGQYVQVSMVGQTYQNLKANLLNSDGTAKQTQNIQYRPLNLQVRLPSGLNEVPVDWI
DSPGEIFRRSWQWEHPQEWESFQEIVRQSEGVLLILPPYREILLPNLEVTNFVTQKQWCNGFESWARFFCDDCPKAKHIV
ICLNKADLINCNLSEESERLAYRPDGSSMNWLQRHNYVVNSYFRLVKSQIAQINRSRPGLSVRCFITSIYDRSLLELPWI
YLASYLAN
>Mature_247_residues
GVVYIGDRAVGKTHLALELVNPQGQYVQVSMVGQTYQNLKANLLNSDGTAKQTQNIQYRPLNLQVRLPSGLNEVPVDWID
SPGEIFRRSWQWEHPQEWESFQEIVRQSEGVLLILPPYREILLPNLEVTNFVTQKQWCNGFESWARFFCDDCPKAKHIVI
CLNKADLINCNLSEESERLAYRPDGSSMNWLQRHNYVVNSYFRLVKSQIAQINRSRPGLSVRCFITSIYDRSLLELPWIY
LASYLAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28739; Mature: 28608

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVVYIGDRAVGKTHLALELVNPQGQYVQVSMVGQTYQNLKANLLNSDGTAKQTQNIQYR
CCEEEECCCCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHCCCCCCCHHHCCCEEE
PLNLQVRLPSGLNEVPVDWIDSPGEIFRRSWQWEHPQEWESFQEIVRQSEGVLLILPPYR
CEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCHH
EILLPNLEVTNFVTQKQWCNGFESWARFFCDDCPKAKHIVICLNKADLINCNLSEESERL
HHHCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCCCCCE
AYRPDGSSMNWLQRHNYVVNSYFRLVKSQIAQINRSRPGLSVRCFITSIYDRSLLELPWI
EECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHH
YLASYLAN
HHHHHHCC
>Mature Secondary Structure 
GVVYIGDRAVGKTHLALELVNPQGQYVQVSMVGQTYQNLKANLLNSDGTAKQTQNIQYR
CEEEECCCCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHCCCCCCCHHHCCCEEE
PLNLQVRLPSGLNEVPVDWIDSPGEIFRRSWQWEHPQEWESFQEIVRQSEGVLLILPPYR
CEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCHH
EILLPNLEVTNFVTQKQWCNGFESWARFFCDDCPKAKHIVICLNKADLINCNLSEESERL
HHHCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCCCCCE
AYRPDGSSMNWLQRHNYVVNSYFRLVKSQIAQINRSRPGLSVRCFITSIYDRSLLELPWI
EECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHH
YLASYLAN
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA