Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475644

Identifier: 113475644

GI number: 113475644

Start: 3089939

End: 3090757

Strand: Reverse

Name: 113475644

Synonym: Tery_1981

Alternate gene names: NA

Gene position: 3090757-3089939 (Counterclockwise)

Preceding gene: 113475645

Following gene: 113475643

Centisome position: 39.88

GC content: 40.9

Gene sequence:

>819_bases
ATGGGAAATATTTGTATTATCGGACCGAGGAGTTCTGGCAAAACAACTTATCTGGCAGGACTGGCATATTGGCCGGATAC
TCATAACCAAAATTTTGAAGTTACTCCTATCACAAAAGAGGCACAAAATTTAGTAAATCAAGCTGAAGATATTATTCTTA
GTGGAGATTCTTTAAGGAGGACAGAGATAGATGGGTTCAAAATTAAAACTGTTTACGATTTACCGTTGTATTCTTTTCAA
ATAGAAAAAAAGAGGAGGTGGCGCAAACCAGAGGAAATCAATTTAGTGGTTCGAGATTATCCAGGGGAAATTTTTGACGA
TTTGGCCTCGGGAATTTCTAATGAAATACATCAAGAATTTCTCAATGAATGTTTAATTCCAGATATTGTTGGCTGTTTAT
TGCTCCTCCATAAATGGGAGTTGGGCAACGACCAATTTTACAGGAGGATGATAGGGAGATTTATGGATTTAATGGACAGG
CGCGATCGCCTAAAAAATTTGCGACTGGCAGTGGCAATGAGTAAATGCGAAAGGGGAGAAATTTGGCCTGGTCGTCTGGA
CCCGGAATTGGACTTATTTGAAGTACATTTGCCCCGCACTAGAAAAATTTTGCGCCAGAGGATTCCTAAGAATAATTTAC
AATTTTATGCCATATCTACTTTTGGGGTTCTGGAAAGGAACAATCCTCGTCCGAATCGTGCTGATGAGGAGGGGAGTCTG
CGTTCTGTTTTACGATCGCCGCATCAGTGGCGACCCTACGGGCTGATTTCGCCCTTATATTGGTTAAGTACGGGTAAGAG
GATGCGATCTGGTGTTTAA

Upstream 100 bases:

>100_bases
TCAGTTCGCTGTTTTATTACCAGTATCTATGATCGTAGTTTGCTGGAGTTGCCCTGGATCTATTTAGCTAGTTATTTAGC
TAATTAATGGAGGAGGAAAT

Downstream 100 bases:

>100_bases
ATCTCTATTTAAAGATAAAGGTGAAGAATCTCAAGAGCAAAATTTATCTGGTGTCCTGCGGCTGATAGGCGATCGCTCTG
CTGGTAAGACTACTTATATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MGNICIIGPRSSGKTTYLAGLAYWPDTHNQNFEVTPITKEAQNLVNQAEDIILSGDSLRRTEIDGFKIKTVYDLPLYSFQ
IEKKRRWRKPEEINLVVRDYPGEIFDDLASGISNEIHQEFLNECLIPDIVGCLLLLHKWELGNDQFYRRMIGRFMDLMDR
RDRLKNLRLAVAMSKCERGEIWPGRLDPELDLFEVHLPRTRKILRQRIPKNNLQFYAISTFGVLERNNPRPNRADEEGSL
RSVLRSPHQWRPYGLISPLYWLSTGKRMRSGV

Sequences:

>Translated_272_residues
MGNICIIGPRSSGKTTYLAGLAYWPDTHNQNFEVTPITKEAQNLVNQAEDIILSGDSLRRTEIDGFKIKTVYDLPLYSFQ
IEKKRRWRKPEEINLVVRDYPGEIFDDLASGISNEIHQEFLNECLIPDIVGCLLLLHKWELGNDQFYRRMIGRFMDLMDR
RDRLKNLRLAVAMSKCERGEIWPGRLDPELDLFEVHLPRTRKILRQRIPKNNLQFYAISTFGVLERNNPRPNRADEEGSL
RSVLRSPHQWRPYGLISPLYWLSTGKRMRSGV
>Mature_271_residues
GNICIIGPRSSGKTTYLAGLAYWPDTHNQNFEVTPITKEAQNLVNQAEDIILSGDSLRRTEIDGFKIKTVYDLPLYSFQI
EKKRRWRKPEEINLVVRDYPGEIFDDLASGISNEIHQEFLNECLIPDIVGCLLLLHKWELGNDQFYRRMIGRFMDLMDRR
DRLKNLRLAVAMSKCERGEIWPGRLDPELDLFEVHLPRTRKILRQRIPKNNLQFYAISTFGVLERNNPRPNRADEEGSLR
SVLRSPHQWRPYGLISPLYWLSTGKRMRSGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31786; Mature: 31655

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNICIIGPRSSGKTTYLAGLAYWPDTHNQNFEVTPITKEAQNLVNQAEDIILSGDSLRR
CCCEEEECCCCCCCEEEEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHEEECCCCCCE
TEIDGFKIKTVYDLPLYSFQIEKKRRWRKPEEINLVVRDYPGEIFDDLASGISNEIHQEF
EECCCEEEEEEEECCCEEEEEHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
LNECLIPDIVGCLLLLHKWELGNDQFYRRMIGRFMDLMDRRDRLKNLRLAVAMSKCERGE
HHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IWPGRLDPELDLFEVHLPRTRKILRQRIPKNNLQFYAISTFGVLERNNPRPNRADEEGSL
CCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCCHHH
RSVLRSPHQWRPYGLISPLYWLSTGKRMRSGV
HHHHCCCCCCCCCCHHHHHHHHHCCHHHHCCC
>Mature Secondary Structure 
GNICIIGPRSSGKTTYLAGLAYWPDTHNQNFEVTPITKEAQNLVNQAEDIILSGDSLRR
CCEEEECCCCCCCEEEEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHEEECCCCCCE
TEIDGFKIKTVYDLPLYSFQIEKKRRWRKPEEINLVVRDYPGEIFDDLASGISNEIHQEF
EECCCEEEEEEEECCCEEEEEHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
LNECLIPDIVGCLLLLHKWELGNDQFYRRMIGRFMDLMDRRDRLKNLRLAVAMSKCERGE
HHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IWPGRLDPELDLFEVHLPRTRKILRQRIPKNNLQFYAISTFGVLERNNPRPNRADEEGSL
CCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCCHHH
RSVLRSPHQWRPYGLISPLYWLSTGKRMRSGV
HHHHCCCCCCCCCCHHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA