Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113475641
Identifier: 113475641
GI number: 113475641
Start: 3083476
End: 3086151
Strand: Reverse
Name: 113475641
Synonym: Tery_1978
Alternate gene names: NA
Gene position: 3086151-3083476 (Counterclockwise)
Preceding gene: 113475642
Following gene: 113475640
Centisome position: 39.82
GC content: 36.25
Gene sequence:
>2676_bases ATGCCTACTTATAATATACACGAATTCAGCACTGGTATAAATGTAGAAACATTGCCCGATAGCAGTTGGAGATCGCGGGG GTATAAGGTAGGAGAATATATGAACTCAACCTTGCCGCAAATTCCCTATGTTGTCCAACTAGCGATCGCTAACAAAATGT TTGAGGTATCCAAGGATAGTCATAGTCAAAAACCTACTTTTGTAGGACGAGAGGTTAGGGGCAAAAATGCAGATCCCGCT TGGTCGGTGGTAGCGGTAGTGACTCCAGGAAGGGATGACTACGGGCTTTTTAACTCTTTTTATCGATATATTTTATGCCA GGGAGTAGATCGACTCTGGGTAATATTAGATGCGATAGATAATTATTCGCAAAAATACGGACGACTACCAATTTTCAATC CATCGGAAATTAAGGAAATTGGCAAGCCGAACTATCACAATATTTCTAATAAACCCCTAGTAACCTTACCTTCAGAGCTA AATTCTTTGACAAGCAACTATCAACGAGCTTTGATTCTTCAACCAGGACAAGTTTCCGATCTACAGACAATTAATGCAGT AGCTGAGAAGATAGCTAATGGTCAACTTGTATCTTGGGCATATGATGTGGAGGCTGTGGAACGTGCAAGAAGATTTCTAG TTATTCAAGCGGCTGATGAAAAAGCGTATCAAGATCTAATAAGAATAGGGAATGCTTCAATTGATAATCTATCAAGTGTT GATGAACCCTCTATTGAATTAGCAATAAAAGGTTTGATAGGTGGTTCGCAAATTAAGCAGGAATGGATTCAAGCTCTTTT ACAGAACGAGCAAGTAACTTCAGACCATTGCCAAACAATCTTTGATGATCAAGGTGCCCATACTAGGATTAAGCAGAGAA ATTATAGCCCTCAAATGGTGCGACTTTTAACTTTAAGGGCGATAATTATTCCAGATACTTTGCCTGAGTATCTAGAATGG TTTGGTATTGATGGCAAAAATAAGGGAAAAGGGGATAATAAGCAAAAAGTTTCTCTTGAGTTTCAAGGACAACTTAAAAA ACATATTTTACAACTAGAGCCATTAATTGATGGAAGCATGAAGAGTGTCCTGGAGCAAATATTGAAGAAGAAGATATCAA TTCCAGCATTCAGTTGGTTATTAACTGCACAAAAAAGTCTTTGGTCGTCATATCGCGCCTCACTTTTGCAAAATGTCAGA GATGATTTAGAAGCTATTGATAACTATTTGAACTCTTCTGATGATAGCCCGTCGGAACCTTCGTTTGCTTGTGGAGATTC GATTTGGAAAAACTTGCAAAGTGGGCTTCCGGGACCCAACTATCGTTATAGCTATTATCAACCTTTTGCGGATTTGTTTG AGAGGTTGGGTGACTATCAGTTAGCTTCCTATTTTTACCAAGTCAGTAAAGGGGTGGTACCGAAAAATTTATTTCTGAAA GCTTTTAAAAACAAAGATAAATCAGATCTTTGGGGTTTGACACTAAACAGAGAAGTTACTTGGGATGAGCATCTGATTAA CTTGTTGAGAAGATATTCTTTATCTTTGGCGGCAATATTCATTCTTGTGCTAACTAACTTGTTTTCTTATATGCTAGGTT TACAAAGTAAAGGTAAAATAGGGTTAAAAAACTCAAATGGGGAAACATTAGAACAGGCAAGAGAAGCAGGAGAACAAGAA GGCTATGACAAGGGCTATCAAGTTGGTTATCAAGAAGGATTAAATGCTGCGAGACAAGTTGAAATAATTCCTCCTATGAC TAAGGCATCTAGTGAATTTTCAACAACTGCTACAGTGATGGAGGCTCTTGTCAAGAGACTTACAAATCAACTAACGGAAA AGTTTAATCAAGCGGATCCACAAATAATGCGCAATCAAGTAATAAAGGAAATTAAAGCCATTATTGGCAACCCGAACCTT GATTATAGCTCCGCAATTCAAGGCAATGAAAATCACAAAAAGCAATTGATAGAGGCTATCTATTGGTATCAAGCCAACAC AGGAGAAAAAGGGTATGGATACATAGATGATAATTTTGAAACAGATGAAAGAATTGAAAAAGAAGTAAACAATACTTTAC TGTTCAACTTTGCTAATAGAACGAAGCCAGCTTTAGAAAAACTGATAGAAGAGTTGTTGCAAGATAACAGTTTAAGACAA AAAAATATTGACCGCATCCAGATTATTAATGCTATCAAAAATACTTTTGTGGGAATAACAGATTATACAGCTACCATAGA AGAAGGAAAGCCAAAAGAGGTAGAAAAGTTTGTTAATTCTATTCAACAATACCAAAATGGAGGTGATGGCATAATTAATT ATGGTAAACAAACATATCAAAGGTTAAAAGAAGAAATAAAAACACAATATGAAGAAAGATTCAATTTTGCTAACAAAACT AAGCCAGCTTTAGAAAAACTGATAGAAGAGTTGTTAGAAGATGAAAACTTAAGACAAGAAAAGTTTGATCGCAGCCAGAT TATCAATGCTATCAAAAATACTTTTGTAGGAATAACAGATTATGCAGGTGCTATAGAAAAAGGAAACCCACAAGAGGTGG AAAAGTTTGTTAATTCTATTCGAGAATACCAAAATGGAGGCGATGGCATAATTCATTATAGTGAAGAAACATATCAGAGG TTAAAACAAGATATCCAAAGACAATTGCTAGAATAG
Upstream 100 bases:
>100_bases CTAATAATAGTTTGATGCTTTAGTGGTAGGATTAATATTTGAAAATTTATTAGCTTTATACTGGCAAACGCAATCAAGAA TTAGATAAGGATTAAAGCAA
Downstream 100 bases:
>100_bases CGATCGCTAATTCCAAACAATAGTTCCCAATAAACTCACCCTTAAAAAATAAACATGAGAACCTACCTTTACATATCATC AGGAATCGCATCCGCCCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 891; Mature: 890
Protein sequence:
>891_residues MPTYNIHEFSTGINVETLPDSSWRSRGYKVGEYMNSTLPQIPYVVQLAIANKMFEVSKDSHSQKPTFVGREVRGKNADPA WSVVAVVTPGRDDYGLFNSFYRYILCQGVDRLWVILDAIDNYSQKYGRLPIFNPSEIKEIGKPNYHNISNKPLVTLPSEL NSLTSNYQRALILQPGQVSDLQTINAVAEKIANGQLVSWAYDVEAVERARRFLVIQAADEKAYQDLIRIGNASIDNLSSV DEPSIELAIKGLIGGSQIKQEWIQALLQNEQVTSDHCQTIFDDQGAHTRIKQRNYSPQMVRLLTLRAIIIPDTLPEYLEW FGIDGKNKGKGDNKQKVSLEFQGQLKKHILQLEPLIDGSMKSVLEQILKKKISIPAFSWLLTAQKSLWSSYRASLLQNVR DDLEAIDNYLNSSDDSPSEPSFACGDSIWKNLQSGLPGPNYRYSYYQPFADLFERLGDYQLASYFYQVSKGVVPKNLFLK AFKNKDKSDLWGLTLNREVTWDEHLINLLRRYSLSLAAIFILVLTNLFSYMLGLQSKGKIGLKNSNGETLEQAREAGEQE GYDKGYQVGYQEGLNAARQVEIIPPMTKASSEFSTTATVMEALVKRLTNQLTEKFNQADPQIMRNQVIKEIKAIIGNPNL DYSSAIQGNENHKKQLIEAIYWYQANTGEKGYGYIDDNFETDERIEKEVNNTLLFNFANRTKPALEKLIEELLQDNSLRQ KNIDRIQIINAIKNTFVGITDYTATIEEGKPKEVEKFVNSIQQYQNGGDGIINYGKQTYQRLKEEIKTQYEERFNFANKT KPALEKLIEELLEDENLRQEKFDRSQIINAIKNTFVGITDYAGAIEKGNPQEVEKFVNSIREYQNGGDGIIHYSEETYQR LKQDIQRQLLE
Sequences:
>Translated_891_residues MPTYNIHEFSTGINVETLPDSSWRSRGYKVGEYMNSTLPQIPYVVQLAIANKMFEVSKDSHSQKPTFVGREVRGKNADPA WSVVAVVTPGRDDYGLFNSFYRYILCQGVDRLWVILDAIDNYSQKYGRLPIFNPSEIKEIGKPNYHNISNKPLVTLPSEL NSLTSNYQRALILQPGQVSDLQTINAVAEKIANGQLVSWAYDVEAVERARRFLVIQAADEKAYQDLIRIGNASIDNLSSV DEPSIELAIKGLIGGSQIKQEWIQALLQNEQVTSDHCQTIFDDQGAHTRIKQRNYSPQMVRLLTLRAIIIPDTLPEYLEW FGIDGKNKGKGDNKQKVSLEFQGQLKKHILQLEPLIDGSMKSVLEQILKKKISIPAFSWLLTAQKSLWSSYRASLLQNVR DDLEAIDNYLNSSDDSPSEPSFACGDSIWKNLQSGLPGPNYRYSYYQPFADLFERLGDYQLASYFYQVSKGVVPKNLFLK AFKNKDKSDLWGLTLNREVTWDEHLINLLRRYSLSLAAIFILVLTNLFSYMLGLQSKGKIGLKNSNGETLEQAREAGEQE GYDKGYQVGYQEGLNAARQVEIIPPMTKASSEFSTTATVMEALVKRLTNQLTEKFNQADPQIMRNQVIKEIKAIIGNPNL DYSSAIQGNENHKKQLIEAIYWYQANTGEKGYGYIDDNFETDERIEKEVNNTLLFNFANRTKPALEKLIEELLQDNSLRQ KNIDRIQIINAIKNTFVGITDYTATIEEGKPKEVEKFVNSIQQYQNGGDGIINYGKQTYQRLKEEIKTQYEERFNFANKT KPALEKLIEELLEDENLRQEKFDRSQIINAIKNTFVGITDYAGAIEKGNPQEVEKFVNSIREYQNGGDGIIHYSEETYQR LKQDIQRQLLE >Mature_890_residues PTYNIHEFSTGINVETLPDSSWRSRGYKVGEYMNSTLPQIPYVVQLAIANKMFEVSKDSHSQKPTFVGREVRGKNADPAW SVVAVVTPGRDDYGLFNSFYRYILCQGVDRLWVILDAIDNYSQKYGRLPIFNPSEIKEIGKPNYHNISNKPLVTLPSELN SLTSNYQRALILQPGQVSDLQTINAVAEKIANGQLVSWAYDVEAVERARRFLVIQAADEKAYQDLIRIGNASIDNLSSVD EPSIELAIKGLIGGSQIKQEWIQALLQNEQVTSDHCQTIFDDQGAHTRIKQRNYSPQMVRLLTLRAIIIPDTLPEYLEWF GIDGKNKGKGDNKQKVSLEFQGQLKKHILQLEPLIDGSMKSVLEQILKKKISIPAFSWLLTAQKSLWSSYRASLLQNVRD DLEAIDNYLNSSDDSPSEPSFACGDSIWKNLQSGLPGPNYRYSYYQPFADLFERLGDYQLASYFYQVSKGVVPKNLFLKA FKNKDKSDLWGLTLNREVTWDEHLINLLRRYSLSLAAIFILVLTNLFSYMLGLQSKGKIGLKNSNGETLEQAREAGEQEG YDKGYQVGYQEGLNAARQVEIIPPMTKASSEFSTTATVMEALVKRLTNQLTEKFNQADPQIMRNQVIKEIKAIIGNPNLD YSSAIQGNENHKKQLIEAIYWYQANTGEKGYGYIDDNFETDERIEKEVNNTLLFNFANRTKPALEKLIEELLQDNSLRQK NIDRIQIINAIKNTFVGITDYTATIEEGKPKEVEKFVNSIQQYQNGGDGIINYGKQTYQRLKEEIKTQYEERFNFANKTK PALEKLIEELLEDENLRQEKFDRSQIINAIKNTFVGITDYAGAIEKGNPQEVEKFVNSIREYQNGGDGIIHYSEETYQRL KQDIQRQLLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101634; Mature: 101503
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTYNIHEFSTGINVETLPDSSWRSRGYKVGEYMNSTLPQIPYVVQLAIANKMFEVSKDS CCCCCCCHHCCCCCEEECCCCHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC HSQKPTFVGREVRGKNADPAWSVVAVVTPGRDDYGLFNSFYRYILCQGVDRLWVILDAID CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH NYSQKYGRLPIFNPSEIKEIGKPNYHNISNKPLVTLPSELNSLTSNYQRALILQPGQVSD HHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHCEEEEECCCCCCH LQTINAVAEKIANGQLVSWAYDVEAVERARRFLVIQAADEKAYQDLIRIGNASIDNLSSV HHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHEEEEEECCHHHHHHHHHHCCCCCCCCCCC DEPSIELAIKGLIGGSQIKQEWIQALLQNEQVTSDHCQTIFDDQGAHTRIKQRNYSPQMV CCCCHHHEEHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHCCCCHHHH RLLTLRAIIIPDTLPEYLEWFGIDGKNKGKGDNKQKVSLEFQGQLKKHILQLEPLIDGSM HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCHHH KSVLEQILKKKISIPAFSWLLTAQKSLWSSYRASLLQNVRDDLEAIDNYLNSSDDSPSEP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SFACGDSIWKNLQSGLPGPNYRYSYYQPFADLFERLGDYQLASYFYQVSKGVVPKNLFLK CCHHHHHHHHHHHHCCCCCCCCCHHHCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHH AFKNKDKSDLWGLTLNREVTWDEHLINLLRRYSLSLAAIFILVLTNLFSYMLGLQSKGKI HHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE GLKNSNGETLEQAREAGEQEGYDKGYQVGYQEGLNAARQVEIIPPMTKASSEFSTTATVM ECCCCCCHHHHHHHHHHHCCCCCHHHHCCHHHCCCHHHEEEECCCCCCCCCHHHHHHHHH EALVKRLTNQLTEKFNQADPQIMRNQVIKEIKAIIGNPNLDYSSAIQGNENHKKQLIEAI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHH YWYQANTGEKGYGYIDDNFETDERIEKEVNNTLLFNFANRTKPALEKLIEELLQDNSLRQ HHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECHHCCHHHHHHHHHHHHCCCCCHH KNIDRIQIINAIKNTFVGITDYTATIEEGKPKEVEKFVNSIQQYQNGGDGIINYGKQTYQ HCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHCCHHHHH RLKEEIKTQYEERFNFANKTKPALEKLIEELLEDENLRQEKFDRSQIINAIKNTFVGITD HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHH YAGAIEKGNPQEVEKFVNSIREYQNGGDGIIHYSEETYQRLKQDIQRQLLE HHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHCC >Mature Secondary Structure PTYNIHEFSTGINVETLPDSSWRSRGYKVGEYMNSTLPQIPYVVQLAIANKMFEVSKDS CCCCCCHHCCCCCEEECCCCHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC HSQKPTFVGREVRGKNADPAWSVVAVVTPGRDDYGLFNSFYRYILCQGVDRLWVILDAID CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH NYSQKYGRLPIFNPSEIKEIGKPNYHNISNKPLVTLPSELNSLTSNYQRALILQPGQVSD HHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHCEEEEECCCCCCH LQTINAVAEKIANGQLVSWAYDVEAVERARRFLVIQAADEKAYQDLIRIGNASIDNLSSV HHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHEEEEEECCHHHHHHHHHHCCCCCCCCCCC DEPSIELAIKGLIGGSQIKQEWIQALLQNEQVTSDHCQTIFDDQGAHTRIKQRNYSPQMV CCCCHHHEEHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHCCCCHHHH RLLTLRAIIIPDTLPEYLEWFGIDGKNKGKGDNKQKVSLEFQGQLKKHILQLEPLIDGSM HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCHHH KSVLEQILKKKISIPAFSWLLTAQKSLWSSYRASLLQNVRDDLEAIDNYLNSSDDSPSEP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SFACGDSIWKNLQSGLPGPNYRYSYYQPFADLFERLGDYQLASYFYQVSKGVVPKNLFLK CCHHHHHHHHHHHHCCCCCCCCCHHHCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHH AFKNKDKSDLWGLTLNREVTWDEHLINLLRRYSLSLAAIFILVLTNLFSYMLGLQSKGKI HHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE GLKNSNGETLEQAREAGEQEGYDKGYQVGYQEGLNAARQVEIIPPMTKASSEFSTTATVM ECCCCCCHHHHHHHHHHHCCCCCHHHHCCHHHCCCHHHEEEECCCCCCCCCHHHHHHHHH EALVKRLTNQLTEKFNQADPQIMRNQVIKEIKAIIGNPNLDYSSAIQGNENHKKQLIEAI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHH YWYQANTGEKGYGYIDDNFETDERIEKEVNNTLLFNFANRTKPALEKLIEELLQDNSLRQ HHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECHHCCHHHHHHHHHHHHCCCCCHH KNIDRIQIINAIKNTFVGITDYTATIEEGKPKEVEKFVNSIQQYQNGGDGIINYGKQTYQ HCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHCCHHHHH RLKEEIKTQYEERFNFANKTKPALEKLIEELLEDENLRQEKFDRSQIINAIKNTFVGITD HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHH YAGAIEKGNPQEVEKFVNSIREYQNGGDGIIHYSEETYQRLKQDIQRQLLE HHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA