Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475642

Identifier: 113475642

GI number: 113475642

Start: 3086414

End: 3089044

Strand: Reverse

Name: 113475642

Synonym: Tery_1979

Alternate gene names: NA

Gene position: 3089044-3086414 (Counterclockwise)

Preceding gene: 113475643

Following gene: 113475641

Centisome position: 39.86

GC content: 37.32

Gene sequence:

>2631_bases
ATGCATACTTATAATATACACGAATTCAGCACTGGTATAAATGTAGAAAAATTGCCCGATGGCAGTTGGAGATCGCGGGG
GTATAAGGTAGGAGAATATATGAACTTAACCTTGCCGCAAATTCCCTTAGTTGTTGAACGAGCGATCGCTAACAAAATGT
TTGAGGTATCCAAGGATCGTCATAGTCAAAAACCTACTTTTGTAGGACGAGAGGTTAGGGGCAACAATGGAGCTCCCGGT
TGGTCAGTGGTAGCGGTAGTCACTCCAGGAGGAGATGAATACGGGCGTTTTAATTCTTTTTATCGATATTTTTTATGTCA
GGGAGTAGATCGACTCTGGGTAATATTAGATGAGATCAATAGTTATTGGCAACAATACGGACAACCACCAATTTTCAATC
CATTGGAAATTAAAGAAATTGGCAAGCCGAACCATCACAATATTTCTAATAAGCCCCTAGTAACCTTACCTTCAGAGCTA
AATGCTTTGGCAGGTAACCATCAACTACCTTTGATTCTTCAACCAGGAAAAGTGTCTGATCTACAGACAATTAATGCAAT
GGCTGAGAAGATAGCTAATGGTCAACCTGTATCTTGGGCATACGATGTGGAGGCGGTGGAAGATGCAGAAAGATTTCTAG
TTATTCAAGCGGCTGATGAAAAAGCGTATCAAGGTCTAAGGAAAATAGGGAATGCTTCAATTAATAATCCCAAAGCCACC
CTTCCATCACATGTTGATGGAGCGGCCATTGAAACAGCAATAAAAGCTTTGAGCAGCGGTTCGCAAATTAAGCAGGAATG
GATTCAAGCTCTTTTACAGGACGATCAAGTAACTTCAGAGCATTGGAAAATAATCTTTGATGATCGGGGTGCCCATACTG
GGATTAAGCAGAGAAATTCTAGTGCTCAAATGGTGCGACTTTTAACTTTAAGGGCAATAATTCTTCCAGAGACTTTACCT
GAGTATCTCGAATGGTTTGGTATTGATGGCAAAAATAAGAGAAAAGAGGATAATAAGCAAAAAGTTTCTCTTGCGTTTCA
AGGAAAACTTCAAAGATATATTTTACAACTAAAGCCGTTAATTGATGAAAGCATGAAAAGTATCCTGGAGCAAATATTGA
AGAAGAAGATATCAATTCCAGCATTCAGTTGGTTGTTAACTGCACAAAAAAGCCTTTGGTCGTCGTATCGCCCCTCGCTC
GTGAAAAATGTCAGAAATGATTTAGAAACTATTGATCACAATTTGAAATCTGATGATAGCCCGTCGGAACCTTCGTTTGC
TTGTGGAGATTCGATTTGGAAAAAATTGCAAAGTGAGCTGCGGAAACCCAACTATCGTGGTAGCTATTATCAACCTTTTG
CGGATTTGTTTGAGAGGTTGCGTGACTATGAGTTAGCTTCCTATTTTTACCAAGTCAGTAAGGGGGTGGTGCCGAAAAAT
TTATTTCTGAAAGCTCTTAAAAACAACGAAGACAAATCAGATCTTTGGGGTTTGACACTAAAGAGAGAAATTTCTTGGGA
AGAACATCTGATTCGTTGCTTGATCAAAAATTCTTTGCGTTTGACTATAGCAATTGTTTTTTTGACAATCGGATATTTGA
TAGGTAAAGGACAAAATCAAACACCTCAAGCACAAAAACCAGGGGAACAACAGCTACGAATAGCATATAGTCAGGGTTAT
TTAAAGGGACAAGAAGATGCTATTAACAAAATCAAGAATACGACACCAAGTCCAAGTCCAAGTCCAAATATAAGTCCAAG
TCCAAATCTAAGTCTAAGTCCAAGTCCAAGTCCAAGTCCAAGTCCTTCTATTCCAAGGAATATATTAGAAAAAGAGATGA
ATATAGCACTTGACAATTTCCCTCAGAGTATCAGAGCAATTGATAAAATCACATCCGATCTAGCTTCTTTAGAAGTGGCA
AAGCAAGAGGAATTAGAAAAACAAAAGTTTGTCCAAGAAATTCAGAAGATTCTTGCTAATGATTCAGCACTTAATTATGA
GCAAGCAACTACTAAACTATATTTTTTGATAGTAGGGAAGCAAAAAAGAAAAGAGGCTCGCAAAAAATGGGTAAAAGCCA
TCTATTCATACCAACAGAACAAACAGGAAAAGCTAAAAAATCCGCCTAATGGATATATAAATCCTGATGATAATACAGCT
AATTTATTGAAGTGTAACGTAGCTGAATCTCTAAGTTGGAAATGGCAAGATTGGCCAGAGAATTGTTTACCAGAAATGAC
AGAAGATCAAAAAAAGATTGCTACTAGTAAGGACAAGTTTAACGAGATAACTTACGAAGCAATCAGTCGAATTATATCAG
AGTTGAGATATTTAGGACTTGATCAAGAAGCGATTCACCAAGCTATTCGCGAGACTATTGGTAATGTGAAGAATTTTGAA
TATAAAAAGGCACGAGAAGCGATACCTGAGGGTAAAAACGCCTTAGTTATTGCTATTTATAAATACCAACAAAAAAACAA
GATTCAAGGAGAACCTGATGGGATAATTAATGAGCCTAAAAAACCTTTAGATAGGACAATTCAAAATACGTTTAATATTT
TGCTGGAACAGGTAAAAAATGAATTGGCAAATAACCCCAACAAATATAAAAATTCCCCAGAAAATCAATAA

Upstream 100 bases:

>100_bases
TAGAAAAACCTAAAATGTGGCGGCCTTTTGGTTTAGTTTCGCCTATTTATTGGCTTTGTACTGGCAAACGCAATCAAGAA
TTAGATAAGGATTAAAGCAA

Downstream 100 bases:

>100_bases
ACATAATGATAACCTATCTTCACATCAGAAAATCAATAAACATAATGATAACCTACCTTCAAATCTTATTAGAAATAGCA
TTCACCCTATTTTCCTGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 876; Mature: 876

Protein sequence:

>876_residues
MHTYNIHEFSTGINVEKLPDGSWRSRGYKVGEYMNLTLPQIPLVVERAIANKMFEVSKDRHSQKPTFVGREVRGNNGAPG
WSVVAVVTPGGDEYGRFNSFYRYFLCQGVDRLWVILDEINSYWQQYGQPPIFNPLEIKEIGKPNHHNISNKPLVTLPSEL
NALAGNHQLPLILQPGKVSDLQTINAMAEKIANGQPVSWAYDVEAVEDAERFLVIQAADEKAYQGLRKIGNASINNPKAT
LPSHVDGAAIETAIKALSSGSQIKQEWIQALLQDDQVTSEHWKIIFDDRGAHTGIKQRNSSAQMVRLLTLRAIILPETLP
EYLEWFGIDGKNKRKEDNKQKVSLAFQGKLQRYILQLKPLIDESMKSILEQILKKKISIPAFSWLLTAQKSLWSSYRPSL
VKNVRNDLETIDHNLKSDDSPSEPSFACGDSIWKKLQSELRKPNYRGSYYQPFADLFERLRDYELASYFYQVSKGVVPKN
LFLKALKNNEDKSDLWGLTLKREISWEEHLIRCLIKNSLRLTIAIVFLTIGYLIGKGQNQTPQAQKPGEQQLRIAYSQGY
LKGQEDAINKIKNTTPSPSPSPNISPSPNLSLSPSPSPSPSPSIPRNILEKEMNIALDNFPQSIRAIDKITSDLASLEVA
KQEELEKQKFVQEIQKILANDSALNYEQATTKLYFLIVGKQKRKEARKKWVKAIYSYQQNKQEKLKNPPNGYINPDDNTA
NLLKCNVAESLSWKWQDWPENCLPEMTEDQKKIATSKDKFNEITYEAISRIISELRYLGLDQEAIHQAIRETIGNVKNFE
YKKAREAIPEGKNALVIAIYKYQQKNKIQGEPDGIINEPKKPLDRTIQNTFNILLEQVKNELANNPNKYKNSPENQ

Sequences:

>Translated_876_residues
MHTYNIHEFSTGINVEKLPDGSWRSRGYKVGEYMNLTLPQIPLVVERAIANKMFEVSKDRHSQKPTFVGREVRGNNGAPG
WSVVAVVTPGGDEYGRFNSFYRYFLCQGVDRLWVILDEINSYWQQYGQPPIFNPLEIKEIGKPNHHNISNKPLVTLPSEL
NALAGNHQLPLILQPGKVSDLQTINAMAEKIANGQPVSWAYDVEAVEDAERFLVIQAADEKAYQGLRKIGNASINNPKAT
LPSHVDGAAIETAIKALSSGSQIKQEWIQALLQDDQVTSEHWKIIFDDRGAHTGIKQRNSSAQMVRLLTLRAIILPETLP
EYLEWFGIDGKNKRKEDNKQKVSLAFQGKLQRYILQLKPLIDESMKSILEQILKKKISIPAFSWLLTAQKSLWSSYRPSL
VKNVRNDLETIDHNLKSDDSPSEPSFACGDSIWKKLQSELRKPNYRGSYYQPFADLFERLRDYELASYFYQVSKGVVPKN
LFLKALKNNEDKSDLWGLTLKREISWEEHLIRCLIKNSLRLTIAIVFLTIGYLIGKGQNQTPQAQKPGEQQLRIAYSQGY
LKGQEDAINKIKNTTPSPSPSPNISPSPNLSLSPSPSPSPSPSIPRNILEKEMNIALDNFPQSIRAIDKITSDLASLEVA
KQEELEKQKFVQEIQKILANDSALNYEQATTKLYFLIVGKQKRKEARKKWVKAIYSYQQNKQEKLKNPPNGYINPDDNTA
NLLKCNVAESLSWKWQDWPENCLPEMTEDQKKIATSKDKFNEITYEAISRIISELRYLGLDQEAIHQAIRETIGNVKNFE
YKKAREAIPEGKNALVIAIYKYQQKNKIQGEPDGIINEPKKPLDRTIQNTFNILLEQVKNELANNPNKYKNSPENQ
>Mature_876_residues
MHTYNIHEFSTGINVEKLPDGSWRSRGYKVGEYMNLTLPQIPLVVERAIANKMFEVSKDRHSQKPTFVGREVRGNNGAPG
WSVVAVVTPGGDEYGRFNSFYRYFLCQGVDRLWVILDEINSYWQQYGQPPIFNPLEIKEIGKPNHHNISNKPLVTLPSEL
NALAGNHQLPLILQPGKVSDLQTINAMAEKIANGQPVSWAYDVEAVEDAERFLVIQAADEKAYQGLRKIGNASINNPKAT
LPSHVDGAAIETAIKALSSGSQIKQEWIQALLQDDQVTSEHWKIIFDDRGAHTGIKQRNSSAQMVRLLTLRAIILPETLP
EYLEWFGIDGKNKRKEDNKQKVSLAFQGKLQRYILQLKPLIDESMKSILEQILKKKISIPAFSWLLTAQKSLWSSYRPSL
VKNVRNDLETIDHNLKSDDSPSEPSFACGDSIWKKLQSELRKPNYRGSYYQPFADLFERLRDYELASYFYQVSKGVVPKN
LFLKALKNNEDKSDLWGLTLKREISWEEHLIRCLIKNSLRLTIAIVFLTIGYLIGKGQNQTPQAQKPGEQQLRIAYSQGY
LKGQEDAINKIKNTTPSPSPSPNISPSPNLSLSPSPSPSPSPSIPRNILEKEMNIALDNFPQSIRAIDKITSDLASLEVA
KQEELEKQKFVQEIQKILANDSALNYEQATTKLYFLIVGKQKRKEARKKWVKAIYSYQQNKQEKLKNPPNGYINPDDNTA
NLLKCNVAESLSWKWQDWPENCLPEMTEDQKKIATSKDKFNEITYEAISRIISELRYLGLDQEAIHQAIRETIGNVKNFE
YKKAREAIPEGKNALVIAIYKYQQKNKIQGEPDGIINEPKKPLDRTIQNTFNILLEQVKNELANNPNKYKNSPENQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 99758; Mature: 99758

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTYNIHEFSTGINVEKLPDGSWRSRGYKVGEYMNLTLPQIPLVVERAIANKMFEVSKDR
CCCCCCCHHHCCCCCEECCCCCHHHCCEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
HSQKPTFVGREVRGNNGAPGWSVVAVVTPGGDEYGRFNSFYRYFLCQGVDRLWVILDEIN
CCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHH
SYWQQYGQPPIFNPLEIKEIGKPNHHNISNKPLVTLPSELNALAGNHQLPLILQPGKVSD
HHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCHHHHHHCCCCCCCEEECCCCCCH
LQTINAMAEKIANGQPVSWAYDVEAVEDAERFLVIQAADEKAYQGLRKIGNASINNPKAT
HHHHHHHHHHHCCCCCCEEEECHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCC
LPSHVDGAAIETAIKALSSGSQIKQEWIQALLQDDQVTSEHWKIIFDDRGAHTGIKQRNS
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHCCC
SAQMVRLLTLRAIILPETLPEYLEWFGIDGKNKRKEDNKQKVSLAFQGKLQRYILQLKPL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IDESMKSILEQILKKKISIPAFSWLLTAQKSLWSSYRPSLVKNVRNDLETIDHNLKSDDS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
PSEPSFACGDSIWKKLQSELRKPNYRGSYYQPFADLFERLRDYELASYFYQVSKGVVPKN
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LFLKALKNNEDKSDLWGLTLKREISWEEHLIRCLIKNSLRLTIAIVFLTIGYLIGKGQNQ
HHHHHHHCCCCCHHHHCCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
TPQAQKPGEQQLRIAYSQGYLKGQEDAINKIKNTTPSPSPSPNISPSPNLSLSPSPSPSP
CCCCCCCCHHHHEEHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPSIPRNILEKEMNIALDNFPQSIRAIDKITSDLASLEVAKQEELEKQKFVQEIQKILAN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DSALNYEQATTKLYFLIVGKQKRKEARKKWVKAIYSYQQNKQEKLKNPPNGYINPDDNTA
CCCCCHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCC
NLLKCNVAESLSWKWQDWPENCLPEMTEDQKKIATSKDKFNEITYEAISRIISELRYLGL
CEEEECHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DQEAIHQAIRETIGNVKNFEYKKAREAIPEGKNALVIAIYKYQQKNKIQGEPDGIINEPK
CHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
KPLDRTIQNTFNILLEQVKNELANNPNKYKNSPENQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCC
>Mature Secondary Structure
MHTYNIHEFSTGINVEKLPDGSWRSRGYKVGEYMNLTLPQIPLVVERAIANKMFEVSKDR
CCCCCCCHHHCCCCCEECCCCCHHHCCEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
HSQKPTFVGREVRGNNGAPGWSVVAVVTPGGDEYGRFNSFYRYFLCQGVDRLWVILDEIN
CCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHH
SYWQQYGQPPIFNPLEIKEIGKPNHHNISNKPLVTLPSELNALAGNHQLPLILQPGKVSD
HHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCHHHHHHCCCCCCCEEECCCCCCH
LQTINAMAEKIANGQPVSWAYDVEAVEDAERFLVIQAADEKAYQGLRKIGNASINNPKAT
HHHHHHHHHHHCCCCCCEEEECHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCC
LPSHVDGAAIETAIKALSSGSQIKQEWIQALLQDDQVTSEHWKIIFDDRGAHTGIKQRNS
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHCCC
SAQMVRLLTLRAIILPETLPEYLEWFGIDGKNKRKEDNKQKVSLAFQGKLQRYILQLKPL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IDESMKSILEQILKKKISIPAFSWLLTAQKSLWSSYRPSLVKNVRNDLETIDHNLKSDDS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
PSEPSFACGDSIWKKLQSELRKPNYRGSYYQPFADLFERLRDYELASYFYQVSKGVVPKN
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LFLKALKNNEDKSDLWGLTLKREISWEEHLIRCLIKNSLRLTIAIVFLTIGYLIGKGQNQ
HHHHHHHCCCCCHHHHCCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
TPQAQKPGEQQLRIAYSQGYLKGQEDAINKIKNTTPSPSPSPNISPSPNLSLSPSPSPSP
CCCCCCCCHHHHEEHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPSIPRNILEKEMNIALDNFPQSIRAIDKITSDLASLEVAKQEELEKQKFVQEIQKILAN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DSALNYEQATTKLYFLIVGKQKRKEARKKWVKAIYSYQQNKQEKLKNPPNGYINPDDNTA
CCCCCHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCC
NLLKCNVAESLSWKWQDWPENCLPEMTEDQKKIATSKDKFNEITYEAISRIISELRYLGL
CEEEECHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DQEAIHQAIRETIGNVKNFEYKKAREAIPEGKNALVIAIYKYQQKNKIQGEPDGIINEPK
CHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
KPLDRTIQNTFNILLEQVKNELANNPNKYKNSPENQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA