Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is proB [H]
Identifier: 113475580
GI number: 113475580
Start: 2961697
End: 2962806
Strand: Reverse
Name: proB [H]
Synonym: Tery_1913
Alternate gene names: 113475580
Gene position: 2962806-2961697 (Counterclockwise)
Preceding gene: 113475582
Following gene: 113475577
Centisome position: 38.23
GC content: 37.48
Gene sequence:
>1110_bases ATGAATACAATAGTGATCAAAATAGGCACTTCTAGCCTAACTAATTCAGAAACCGGAAATTTAGCCTTATCTACAATTTC TAGCTTAATTGAAACTATTATCAATTTACGTCAGCAGGGATATCAAGTAGTTTTAGTATCTTCTGGAGCTGTTGGTGTAG GTTGCGATATATTAGGACTAACCAAAAAGCCTCGAAATATTTCTATGAAACAAGCCATAGCAGCAGTAGGTCAAGGACAA ATAATGCGAGTTTACAATGACTTGTTTTCATCTTTGCAACAAACAGTTGCCCAGATTTTATTAACAAAAAGTGACCTGTC ACGACGTAGTAGTTATGTCAATGCCTACAACACATTTCAACAACTTTTTCGACTAGGTGTAGTCCCAATAGTGAATGAAA ATGATACCACTGCTGTTGAAGAGCTAAATTTTGGGGACAATGATACTCTATCAGCTTTAGTTGCCAGTCTAGTAGAGGCT GATTGGTTATTCATACTAACTGATGTCGATAGATTATACTCCGCCGACCCGAGAAAAAATCCAGATGCTTTACCCATTAC CTTAGTAGGGGAAATAGAACAACTCAAAGAACTTAAAGTTCAAGTTGGAGAGTCTGTTAGTGGACGAGGAACTGGGGGAA TGGTTACAAAAATTGAGGCTGCTAAAATTGCTACTTCTGCTGGAGTCCGAACTGTAATTACTGATGGTAAAGTACCCACT AATATACAAAAAATCCTCAATGGAGAATCTATAGGTACTCAGTTTGAACCTCAACCAGAACAAGTCAATGGTCGCAAACA TTGGATTGCCAATGTTTTAGTTCCAGCAGGCCAACTATATCTAGACCAAGGTGCAGTTAAGGCAATTTCTGAGTATGGTA AATCTCTATTAGCTGCTGGTATTATTCAAGTAGAAGGAGAATTTAATTCATCGGATGCTGTCAAACTATGCAATGAAAAA GGCCAGGAAATAGCTAGGGGACTTGTGAACTACAGCAGTATTGAATTGCAAAAAATTCTAGGTTGTCGCTCAGAAAATAT ATCTGATATTTTGGGCTATGTGGGAGCTGAAACAGTTGTACATAGAAATAATCTTTTGCTGACAAATTAA
Upstream 100 bases:
>100_bases AATGCTAACTATACAAGAGATTGTAATAATTAATATTTTGTAATTAGTTCAAAGCTGATTTTTTGCTTGAGAATTAGTAG TGGAAAATTCAATTATTTCT
Downstream 100 bases:
>100_bases ATCATTGTTTCTGGTGGAGCTATATCAGAACCAACAACTAGACTATCTTTAGTGTATTTTAATCCTGGTCTTTGAGTCGT TTCTAAATGCTGATTTGAAT
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK [H]
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MNTIVIKIGTSSLTNSETGNLALSTISSLIETIINLRQQGYQVVLVSSGAVGVGCDILGLTKKPRNISMKQAIAAVGQGQ IMRVYNDLFSSLQQTVAQILLTKSDLSRRSSYVNAYNTFQQLFRLGVVPIVNENDTTAVEELNFGDNDTLSALVASLVEA DWLFILTDVDRLYSADPRKNPDALPITLVGEIEQLKELKVQVGESVSGRGTGGMVTKIEAAKIATSAGVRTVITDGKVPT NIQKILNGESIGTQFEPQPEQVNGRKHWIANVLVPAGQLYLDQGAVKAISEYGKSLLAAGIIQVEGEFNSSDAVKLCNEK GQEIARGLVNYSSIELQKILGCRSENISDILGYVGAETVVHRNNLLLTN
Sequences:
>Translated_369_residues MNTIVIKIGTSSLTNSETGNLALSTISSLIETIINLRQQGYQVVLVSSGAVGVGCDILGLTKKPRNISMKQAIAAVGQGQ IMRVYNDLFSSLQQTVAQILLTKSDLSRRSSYVNAYNTFQQLFRLGVVPIVNENDTTAVEELNFGDNDTLSALVASLVEA DWLFILTDVDRLYSADPRKNPDALPITLVGEIEQLKELKVQVGESVSGRGTGGMVTKIEAAKIATSAGVRTVITDGKVPT NIQKILNGESIGTQFEPQPEQVNGRKHWIANVLVPAGQLYLDQGAVKAISEYGKSLLAAGIIQVEGEFNSSDAVKLCNEK GQEIARGLVNYSSIELQKILGCRSENISDILGYVGAETVVHRNNLLLTN >Mature_369_residues MNTIVIKIGTSSLTNSETGNLALSTISSLIETIINLRQQGYQVVLVSSGAVGVGCDILGLTKKPRNISMKQAIAAVGQGQ IMRVYNDLFSSLQQTVAQILLTKSDLSRRSSYVNAYNTFQQLFRLGVVPIVNENDTTAVEELNFGDNDTLSALVASLVEA DWLFILTDVDRLYSADPRKNPDALPITLVGEIEQLKELKVQVGESVSGRGTGGMVTKIEAAKIATSAGVRTVITDGKVPT NIQKILNGESIGTQFEPQPEQVNGRKHWIANVLVPAGQLYLDQGAVKAISEYGKSLLAAGIIQVEGEFNSSDAVKLCNEK GQEIARGLVNYSSIELQKILGCRSENISDILGYVGAETVVHRNNLLLTN
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline [H]
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain [H]
Homologues:
Organism=Homo sapiens, GI21361368, Length=286, Percent_Identity=30.7692307692308, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI62912457, Length=284, Percent_Identity=30.6338028169014, Blast_Score=107, Evalue=2e-23, Organism=Escherichia coli, GI1786437, Length=364, Percent_Identity=41.4835164835165, Blast_Score=274, Evalue=5e-75, Organism=Caenorhabditis elegans, GI17569969, Length=267, Percent_Identity=33.7078651685393, Blast_Score=127, Evalue=7e-30, Organism=Caenorhabditis elegans, GI17569967, Length=267, Percent_Identity=33.7078651685393, Blast_Score=127, Evalue=8e-30, Organism=Saccharomyces cerevisiae, GI6320506, Length=413, Percent_Identity=39.225181598063, Blast_Score=282, Evalue=5e-77, Organism=Saccharomyces cerevisiae, GI6321822, Length=417, Percent_Identity=39.568345323741, Blast_Score=270, Evalue=3e-73, Organism=Drosophila melanogaster, GI21357643, Length=302, Percent_Identity=30.794701986755, Blast_Score=130, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 [H]
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA [H]
EC number: =2.7.2.11 [H]
Molecular weight: Translated: 39707; Mature: 39707
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS50890 PUA ; PS00902 GLUTAMATE_5_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIVIKIGTSSLTNSETGNLALSTISSLIETIINLRQQGYQVVLVSSGAVGVGCDILGL CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECEEEEEC TKKPRNISMKQAIAAVGQGQIMRVYNDLFSSLQQTVAQILLTKSDLSRRSSYVNAYNTFQ CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLFRLGVVPIVNENDTTAVEELNFGDNDTLSALVASLVEADWLFILTDVDRLYSADPRKN HHHHCCCCEEECCCCCCHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCC PDALPITLVGEIEQLKELKVQVGESVSGRGTGGMVTKIEAAKIATSAGVRTVITDGKVPT CCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHCCCCEEEEECCCCCH NIQKILNGESIGTQFEPQPEQVNGRKHWIANVLVPAGQLYLDQGAVKAISEYGKSLLAAG HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHEECHHHHHHHHHHHHHHHHHC IIQVEGEFNSSDAVKLCNEKGQEIARGLVNYSSIELQKILGCRSENISDILGYVGAETVV EEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCHHHEE HRNNLLLTN ECCCEEECC >Mature Secondary Structure MNTIVIKIGTSSLTNSETGNLALSTISSLIETIINLRQQGYQVVLVSSGAVGVGCDILGL CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECEEEEEC TKKPRNISMKQAIAAVGQGQIMRVYNDLFSSLQQTVAQILLTKSDLSRRSSYVNAYNTFQ CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLFRLGVVPIVNENDTTAVEELNFGDNDTLSALVASLVEADWLFILTDVDRLYSADPRKN HHHHCCCCEEECCCCCCHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCC PDALPITLVGEIEQLKELKVQVGESVSGRGTGGMVTKIEAAKIATSAGVRTVITDGKVPT CCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHCCCCEEEEECCCCCH NIQKILNGESIGTQFEPQPEQVNGRKHWIANVLVPAGQLYLDQGAVKAISEYGKSLLAAG HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHEECHHHHHHHHHHHHHHHHHC IIQVEGEFNSSDAVKLCNEKGQEIARGLVNYSSIELQKILGCRSENISDILGYVGAETVV EEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCHHHEE HRNNLLLTN ECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA