Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475582

Identifier: 113475582

GI number: 113475582

Start: 2965671

End: 2966024

Strand: Reverse

Name: 113475582

Synonym: Tery_1915

Alternate gene names: NA

Gene position: 2966024-2965671 (Counterclockwise)

Preceding gene: 113475586

Following gene: 113475580

Centisome position: 38.27

GC content: 33.9

Gene sequence:

>354_bases
ATGCCATTAATCAAAGTCAAAACTTCCGTTGCCCAACTAGAAAAAGATAAAATTGACAACCTTCTCAAACAACTTTCATC
TAGTATGGCCAAGCATTTTAGTAAATCAGAATCTTACGTAATGACAGCCTTTGAATCTGATATTCCCATGACTTTTGGTG
GAAATAGTGATGAGCCGACTTGCTACATAGAAATTAAAAGTATTGGTAGTATGAAGCCTAACCAAACCAAAGAAATGAGT
CAAGATTTTTGTGAACAAATTAATAAAACTCTCGGGGTTCCTAAAAATCGAATCTATATAGAATTTTCTGATGCTCAAGG
TTATCTTTGGGGTTGGAATAGTTCAACTTTTTGA

Upstream 100 bases:

>100_bases
CTTTCTTTAGGTCTATTATAGACAATTGATTAGTTAACTTTTATAATTGAAGACCTACGTAAATAGTTTATTTTGTTCAT
CCTCAACTATTAATCGAACT

Downstream 100 bases:

>100_bases
TAACTTTTCCTGATTTTTTTGAGGAAATTATAAGGCTACGGGCAACTAAAAAGTCATAAGTCAAAAGTAATTTATTAAAG
AATTTTAATACTTATATAGC

Product: macrophage migration inhibitory factor

Products: NA

Alternate protein names: Macrophage Migration Inhibitory Factor; ATLS1-Like Light-Inducible Protein; Phenylpyruvate Tautomerase; Macrophage Migration Inhibitory Factor Superfamily; 4-Oxalocrotonate Tautomerase; Phenylpyruvate Tautomerase Family Protein; MIF/Phenylpyruvate Tautomerase Family Protein; Macrophage Migration Inhibitory Factor Family; Glycosyl Transferase

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MPLIKVKTSVAQLEKDKIDNLLKQLSSSMAKHFSKSESYVMTAFESDIPMTFGGNSDEPTCYIEIKSIGSMKPNQTKEMS
QDFCEQINKTLGVPKNRIYIEFSDAQGYLWGWNSSTF

Sequences:

>Translated_117_residues
MPLIKVKTSVAQLEKDKIDNLLKQLSSSMAKHFSKSESYVMTAFESDIPMTFGGNSDEPTCYIEIKSIGSMKPNQTKEMS
QDFCEQINKTLGVPKNRIYIEFSDAQGYLWGWNSSTF
>Mature_116_residues
PLIKVKTSVAQLEKDKIDNLLKQLSSSMAKHFSKSESYVMTAFESDIPMTFGGNSDEPTCYIEIKSIGSMKPNQTKEMSQ
DFCEQINKTLGVPKNRIYIEFSDAQGYLWGWNSSTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13261; Mature: 13130

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLIKVKTSVAQLEKDKIDNLLKQLSSSMAKHFSKSESYVMTAFESDIPMTFGGNSDEPT
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCE
CYIEIKSIGSMKPNQTKEMSQDFCEQINKTLGVPKNRIYIEFSDAQGYLWGWNSSTF
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCC
>Mature Secondary Structure 
PLIKVKTSVAQLEKDKIDNLLKQLSSSMAKHFSKSESYVMTAFESDIPMTFGGNSDEPT
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCE
CYIEIKSIGSMKPNQTKEMSQDFCEQINKTLGVPKNRIYIEFSDAQGYLWGWNSSTF
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA