Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475577

Identifier: 113475577

GI number: 113475577

Start: 2958689

End: 2958859

Strand: Reverse

Name: 113475577

Synonym: Tery_1910

Alternate gene names: NA

Gene position: 2958859-2958689 (Counterclockwise)

Preceding gene: 113475580

Following gene: 113475576

Centisome position: 38.18

GC content: 40.35

Gene sequence:

>171_bases
ATGAAACAACCACAACCTACTAATACACCTAACTTGGATGAGCCAAAATTTGGGTTTAACCAGTACGCAGAACGCCTGAA
TGGTAGAGCAGCAATGATTGGTTTTGTATTGACTTTAGCAATCGAATACTTTACTGGAGAAGGTTTGCTCTCTTGGTTGG
GTCTCAATTAG

Upstream 100 bases:

>100_bases
AGAGATATTGACACTGGGTCGACTCCTTTTAAAATATACTTAATAATTATAAACAAACAACTCTATTTGCAAACACTATT
AATTTTAAGGCCAATTGATA

Downstream 100 bases:

>100_bases
GGCTCTGAATATCTACATTAAGTTTTTAAATATATATTATAATAGATATTAAAGCTAGAGTCTACCTCTAATTTTTTACA
GGATTGTTGTTGGTCAGCTC

Product: CAB/ELIP/HLIP-like protein

Products: NA

Alternate protein names: CAB/ELIP/HLIP Family Protein; CAB/ELIP/HLIP Superfamily Protein; High Light Inducible Protein

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MKQPQPTNTPNLDEPKFGFNQYAERLNGRAAMIGFVLTLAIEYFTGEGLLSWLGLN

Sequences:

>Translated_56_residues
MKQPQPTNTPNLDEPKFGFNQYAERLNGRAAMIGFVLTLAIEYFTGEGLLSWLGLN
>Mature_56_residues
MKQPQPTNTPNLDEPKFGFNQYAERLNGRAAMIGFVLTLAIEYFTGEGLLSWLGLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6274; Mature: 6274

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQPQPTNTPNLDEPKFGFNQYAERLNGRAAMIGFVLTLAIEYFTGEGLLSWLGLN
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCC
>Mature Secondary Structure
MKQPQPTNTPNLDEPKFGFNQYAERLNGRAAMIGFVLTLAIEYFTGEGLLSWLGLN
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA