| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475577
Identifier: 113475577
GI number: 113475577
Start: 2958689
End: 2958859
Strand: Reverse
Name: 113475577
Synonym: Tery_1910
Alternate gene names: NA
Gene position: 2958859-2958689 (Counterclockwise)
Preceding gene: 113475580
Following gene: 113475576
Centisome position: 38.18
GC content: 40.35
Gene sequence:
>171_bases ATGAAACAACCACAACCTACTAATACACCTAACTTGGATGAGCCAAAATTTGGGTTTAACCAGTACGCAGAACGCCTGAA TGGTAGAGCAGCAATGATTGGTTTTGTATTGACTTTAGCAATCGAATACTTTACTGGAGAAGGTTTGCTCTCTTGGTTGG GTCTCAATTAG
Upstream 100 bases:
>100_bases AGAGATATTGACACTGGGTCGACTCCTTTTAAAATATACTTAATAATTATAAACAAACAACTCTATTTGCAAACACTATT AATTTTAAGGCCAATTGATA
Downstream 100 bases:
>100_bases GGCTCTGAATATCTACATTAAGTTTTTAAATATATATTATAATAGATATTAAAGCTAGAGTCTACCTCTAATTTTTTACA GGATTGTTGTTGGTCAGCTC
Product: CAB/ELIP/HLIP-like protein
Products: NA
Alternate protein names: CAB/ELIP/HLIP Family Protein; CAB/ELIP/HLIP Superfamily Protein; High Light Inducible Protein
Number of amino acids: Translated: 56; Mature: 56
Protein sequence:
>56_residues MKQPQPTNTPNLDEPKFGFNQYAERLNGRAAMIGFVLTLAIEYFTGEGLLSWLGLN
Sequences:
>Translated_56_residues MKQPQPTNTPNLDEPKFGFNQYAERLNGRAAMIGFVLTLAIEYFTGEGLLSWLGLN >Mature_56_residues MKQPQPTNTPNLDEPKFGFNQYAERLNGRAAMIGFVLTLAIEYFTGEGLLSWLGLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6274; Mature: 6274
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQPQPTNTPNLDEPKFGFNQYAERLNGRAAMIGFVLTLAIEYFTGEGLLSWLGLN CCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCC >Mature Secondary Structure MKQPQPTNTPNLDEPKFGFNQYAERLNGRAAMIGFVLTLAIEYFTGEGLLSWLGLN CCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA