Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475447

Identifier: 113475447

GI number: 113475447

Start: 2708761

End: 2709930

Strand: Reverse

Name: 113475447

Synonym: Tery_1776

Alternate gene names: NA

Gene position: 2709930-2708761 (Counterclockwise)

Preceding gene: 113475448

Following gene: 113475446

Centisome position: 34.97

GC content: 38.97

Gene sequence:

>1170_bases
ATGAAAGTTACATCAGAGTGTATCAAAAGTAATTACGATAAAAGTAATGCCGTTGAACATTACCTATCTAAAGATCGTCG
TGATGGTGTAAAAGTTGAGTGGGAAGAGCCATTTTCTTGTTCGGTTTTTAAGAAAGCGATTAGGTTGTCCCATAAAATTA
AAAAAGATAAGCTAAAAGTTCTTGATATAGGATCCGGCACAGGGGATGGATATGAGTTGCTTAAAAAGCTCTTCAAGGAA
TATAAGGAAATTAGTAATTATCAACTAGAATATCTTGGCATTGATATTAGCCCCCAAATGGTGAAGGCGGCTAATGATTT
GTACGCAAAAGAAAATCATGTTAGGTTTAAGTGTGAAGATATTCGTCACAGCAACATTACTGATTTTTTTGATGTATATC
TTTCCTGTGGAGTTCCTTACTCTCATTTGACTAACGATGAGCTTTACCAAGCCATCAAAACAATTGTTACTAATGTTCGC
AAGTATAATTCCAGGTGTGCGGTAGTTGTAGATGTATTGGGACGCTACAGCATTGAGTGGACACCTAAATGGAATGAAAC
TCGTTGGGACTACTCTATGAGCTTTTTTGAGAGCGAAGGACATGCGGAACCTACATGGATGAGTTTTTACTCCCATGATG
ATTTGCAAAATATTATGCAGAAGGCAGCTGATGCTGTTGGCTGTCCTGTTGAGAGATTTCAGTTTTTCGATCGCTCAATT
ATGGTGGGGCGTCATACTTCTACAGGACAATTTAACCCAAAATTACCGAATTATCGTAATTTGATTAACAGTTTAATGGA
GCCTGGTGAAGAGACAGAGTTGAATAAGCTGATTTTTCAAGTGGAGTTGACAACTGCACCAAAACATATTTTGGAATTCT
TTGAAAAATTCTCCGGTTGGTGGAATTTATTAGTGAGTCAGGCAGGGGCTATCTTAGGTGAGTCTATAGAGGTGGAACTT
GTTGACTTGCCTCAAGAGGTTCAAGGGTTTAAGGCGGAACTTGATAAAGAGTTCCAACAGATTTCTGGAAAAGACGCCCG
CCGACAAAAAGTTGAGCTCATGTTGGCTCAAGTATTGCAAAAATTGGAGGCAACACAGCAACCAGGTTATGGTGTTGGTC
ATGATCTGTTTGGGGTAATGTGGTTAGATGCTAGGGGACTTGATAGTTAA

Upstream 100 bases:

>100_bases
TTGATCATTATTTGAAATACATTCACTATCATTAATTAGTGTTTTCGCGTAAGTCCTTCATCCTGAATGTTGCCCATAGT
TATAAAGTTATTGGTTTTTT

Downstream 100 bases:

>100_bases
ATAAGAACTTACTATACTTATTGAAACTTACACATATATATGGATTTTGTCGCAGTATTAATAATAAGCGAAAACTATAT
GAATAAGTAGCTTGAAGCTT

Product: type 12 methyltransferase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKVTSECIKSNYDKSNAVEHYLSKDRRDGVKVEWEEPFSCSVFKKAIRLSHKIKKDKLKVLDIGSGTGDGYELLKKLFKE
YKEISNYQLEYLGIDISPQMVKAANDLYAKENHVRFKCEDIRHSNITDFFDVYLSCGVPYSHLTNDELYQAIKTIVTNVR
KYNSRCAVVVDVLGRYSIEWTPKWNETRWDYSMSFFESEGHAEPTWMSFYSHDDLQNIMQKAADAVGCPVERFQFFDRSI
MVGRHTSTGQFNPKLPNYRNLINSLMEPGEETELNKLIFQVELTTAPKHILEFFEKFSGWWNLLVSQAGAILGESIEVEL
VDLPQEVQGFKAELDKEFQQISGKDARRQKVELMLAQVLQKLEATQQPGYGVGHDLFGVMWLDARGLDS

Sequences:

>Translated_389_residues
MKVTSECIKSNYDKSNAVEHYLSKDRRDGVKVEWEEPFSCSVFKKAIRLSHKIKKDKLKVLDIGSGTGDGYELLKKLFKE
YKEISNYQLEYLGIDISPQMVKAANDLYAKENHVRFKCEDIRHSNITDFFDVYLSCGVPYSHLTNDELYQAIKTIVTNVR
KYNSRCAVVVDVLGRYSIEWTPKWNETRWDYSMSFFESEGHAEPTWMSFYSHDDLQNIMQKAADAVGCPVERFQFFDRSI
MVGRHTSTGQFNPKLPNYRNLINSLMEPGEETELNKLIFQVELTTAPKHILEFFEKFSGWWNLLVSQAGAILGESIEVEL
VDLPQEVQGFKAELDKEFQQISGKDARRQKVELMLAQVLQKLEATQQPGYGVGHDLFGVMWLDARGLDS
>Mature_389_residues
MKVTSECIKSNYDKSNAVEHYLSKDRRDGVKVEWEEPFSCSVFKKAIRLSHKIKKDKLKVLDIGSGTGDGYELLKKLFKE
YKEISNYQLEYLGIDISPQMVKAANDLYAKENHVRFKCEDIRHSNITDFFDVYLSCGVPYSHLTNDELYQAIKTIVTNVR
KYNSRCAVVVDVLGRYSIEWTPKWNETRWDYSMSFFESEGHAEPTWMSFYSHDDLQNIMQKAADAVGCPVERFQFFDRSI
MVGRHTSTGQFNPKLPNYRNLINSLMEPGEETELNKLIFQVELTTAPKHILEFFEKFSGWWNLLVSQAGAILGESIEVEL
VDLPQEVQGFKAELDKEFQQISGKDARRQKVELMLAQVLQKLEATQQPGYGVGHDLFGVMWLDARGLDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44885; Mature: 44885

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTSECIKSNYDKSNAVEHYLSKDRRDGVKVEWEEPFSCSVFKKAIRLSHKIKKDKLKV
CCCCHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEE
LDIGSGTGDGYELLKKLFKEYKEISNYQLEYLGIDISPQMVKAANDLYAKENHVRFKCED
EECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC
IRHSNITDFFDVYLSCGVPYSHLTNDELYQAIKTIVTNVRKYNSRCAVVVDVLGRYSIEW
CCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEE
TPKWNETRWDYSMSFFESEGHAEPTWMSFYSHDDLQNIMQKAADAVGCPVERFQFFDRSI
CCCCCCCCCCHHHHHHCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHCCCE
MVGRHTSTGQFNPKLPNYRNLINSLMEPGEETELNKLIFQVELTTAPKHILEFFEKFSGW
EEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHEEEEEEECCCHHHHHHHHHHHHHH
WNLLVSQAGAILGESIEVELVDLPQEVQGFKAELDKEFQQISGKDARRQKVELMLAQVLQ
HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KLEATQQPGYGVGHDLFGVMWLDARGLDS
HHHHHCCCCCCCCHHHHHEEEECCCCCCC
>Mature Secondary Structure
MKVTSECIKSNYDKSNAVEHYLSKDRRDGVKVEWEEPFSCSVFKKAIRLSHKIKKDKLKV
CCCCHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEE
LDIGSGTGDGYELLKKLFKEYKEISNYQLEYLGIDISPQMVKAANDLYAKENHVRFKCED
EECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC
IRHSNITDFFDVYLSCGVPYSHLTNDELYQAIKTIVTNVRKYNSRCAVVVDVLGRYSIEW
CCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEE
TPKWNETRWDYSMSFFESEGHAEPTWMSFYSHDDLQNIMQKAADAVGCPVERFQFFDRSI
CCCCCCCCCCHHHHHHCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHCCCE
MVGRHTSTGQFNPKLPNYRNLINSLMEPGEETELNKLIFQVELTTAPKHILEFFEKFSGW
EEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHEEEEEEECCCHHHHHHHHHHHHHH
WNLLVSQAGAILGESIEVELVDLPQEVQGFKAELDKEFQQISGKDARRQKVELMLAQVLQ
HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KLEATQQPGYGVGHDLFGVMWLDARGLDS
HHHHHCCCCCCCCHHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA