Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474584

Identifier: 113474584

GI number: 113474584

Start: 1198130

End: 1198312

Strand: Reverse

Name: 113474584

Synonym: Tery_0741

Alternate gene names: NA

Gene position: 1198312-1198130 (Counterclockwise)

Preceding gene: 113474585

Following gene: 113474578

Centisome position: 15.46

GC content: 36.07

Gene sequence:

>183_bases
ATGGCTAAACGCCGCAATCCAAAAAAAGAAAAAGCACAACGTAATCAAGCTTACGCACGCAAGTTTCGTAAAAAGAAGAA
TACAGGTTTTTTCTCAAAGCGATATTCATCTAAGTTTACATCTGGTAATAATCAAAACGGTAACGATCAATCAGAAGAGA
CTACTAGTGCTGTAGAAGAATAG

Upstream 100 bases:

>100_bases
CAGTTTGAGATTTAGGAATCTTGGGTCATAGCTCAGTGTAGCTTTTAGGAAGCTAATCCCCATTTATGGCTTTCAGAGGA
TGTTAATTAGTGAGGTTATA

Downstream 100 bases:

>100_bases
TATGTTTTAATATTTTAATGTTCAAAGTTCTTAACTATGAATTTTGAAATATAAAATCTAGATTTGAAAATTATATAGTC
AAATCTAGATTTGAAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MAKRRNPKKEKAQRNQAYARKFRKKKNTGFFSKRYSSKFTSGNNQNGNDQSEETTSAVEE

Sequences:

>Translated_60_residues
MAKRRNPKKEKAQRNQAYARKFRKKKNTGFFSKRYSSKFTSGNNQNGNDQSEETTSAVEE
>Mature_59_residues
AKRRNPKKEKAQRNQAYARKFRKKKNTGFFSKRYSSKFTSGNNQNGNDQSEETTSAVEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7005; Mature: 6874

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRRNPKKEKAQRNQAYARKFRKKKNTGFFSKRYSSKFTSGNNQNGNDQSEETTSAVEE
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
AKRRNPKKEKAQRNQAYARKFRKKKNTGFFSKRYSSKFTSGNNQNGNDQSEETTSAVEE
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA