Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is yqeY [H]
Identifier: 113474452
GI number: 113474452
Start: 958283
End: 958738
Strand: Reverse
Name: yqeY [H]
Synonym: Tery_0596
Alternate gene names: 113474452
Gene position: 958738-958283 (Counterclockwise)
Preceding gene: 113474458
Following gene: 113474451
Centisome position: 12.37
GC content: 39.47
Gene sequence:
>456_bases ATGAGTTTAAAGGATAAGATTACAGAAGATATTAAAGCAGCTATGAAGGCCAAGGAAAAGGTGCGTCTGGAGACAGTTCG TAGTATCAAAAAAGTTATTCTAGAGGAGGAAGTAAATGCTAGGGCTGCCGGAAAGGAGTCTTTGACAGAAACTCAAGAAA TGGACATACTAGCAAGGCTGGCCAAACAACGTCGGGATTCTATAGAGCAATATACTCAAGTAGGTCGTCAGGAACTAGCA GATCAAGAAGCAGCAGAATTGGCTATTATTGAGGAATATCTGCCAAAACAGTTATCTGATGATGAAATTGCTCAGGTAAT AGATGAAATTATTGTCCAGGTGGGTGCTAGTTCTGCTAAAGATATGGGTAAAGTTATGGGCCCGGTAATGCAACAGTTGA GGGGTAAAGCTGATGGTAAAAAAGTTCAAGAAATTGTTAAGACTAAGCTAAATTAA
Upstream 100 bases:
>100_bases ACTGGGGTAAAATGTTACACTTAAATTTTTTAAATGCTTTTTGTGGAACATTCCTTATTGAAAAGCTAATAGCTAGTTCA TTTTGCTCAGGATAGGAATT
Downstream 100 bases:
>100_bases TAGTTGGTTAATAGATAGAAGTTGAGAGTATACTTTTGAATAGCTGTGGCTTTATAAGACTGATTATTATTGCTGCAAGA ACTATTGCTATTGTCATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSLKDKITEDIKAAMKAKEKVRLETVRSIKKVILEEEVNARAAGKESLTETQEMDILARLAKQRRDSIEQYTQVGRQELA DQEAAELAIIEEYLPKQLSDDEIAQVIDEIIVQVGASSAKDMGKVMGPVMQQLRGKADGKKVQEIVKTKLN
Sequences:
>Translated_151_residues MSLKDKITEDIKAAMKAKEKVRLETVRSIKKVILEEEVNARAAGKESLTETQEMDILARLAKQRRDSIEQYTQVGRQELA DQEAAELAIIEEYLPKQLSDDEIAQVIDEIIVQVGASSAKDMGKVMGPVMQQLRGKADGKKVQEIVKTKLN >Mature_150_residues SLKDKITEDIKAAMKAKEKVRLETVRSIKKVILEEEVNARAAGKESLTETQEMDILARLAKQRRDSIEQYTQVGRQELAD QEAAELAIIEEYLPKQLSDDEIAQVIDEIIVQVGASSAKDMGKVMGPVMQQLRGKADGKKVQEIVKTKLN
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 16895; Mature: 16764
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKDKITEDIKAAMKAKEKVRLETVRSIKKVILEEEVNARAAGKESLTETQEMDILARL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AKQRRDSIEQYTQVGRQELADQEAAELAIIEEYLPKQLSDDEIAQVIDEIIVQVGASSAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHH DMGKVMGPVMQQLRGKADGKKVQEIVKTKLN HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure SLKDKITEDIKAAMKAKEKVRLETVRSIKKVILEEEVNARAAGKESLTETQEMDILARL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AKQRRDSIEQYTQVGRQELADQEAAELAIIEEYLPKQLSDDEIAQVIDEIIVQVGASSAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHH DMGKVMGPVMQQLRGKADGKKVQEIVKTKLN HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]