Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is hemH [H]
Identifier: 113474458
GI number: 113474458
Start: 973082
End: 974287
Strand: Reverse
Name: hemH [H]
Synonym: Tery_0602
Alternate gene names: 113474458
Gene position: 974287-973082 (Counterclockwise)
Preceding gene: 113474463
Following gene: 113474452
Centisome position: 12.57
GC content: 35.57
Gene sequence:
>1206_bases GTGGTTACAACCCCAGAAAAAATTGAAAATCGAAAAAATTCTATATCTCCAAACCAAAACAGACAAGACAGAGTCGCAGT ATTATTGATGGGATATGGCGAGGTAGAAAGCTATGAAGATTTTGCCAATTATAATGAACAAGCATTAAATTTACTGACCG CTAAGTTTGCTCCTGTTCCTACCTGGATATATCCTCCTTTAGCAAAGTTATTGGCTATTTTTGACCTCCATGAATGGAGT CATCAACATGGTAATTTTATCTCTCCTCATAATGCTATTTTTGAAAGTCAAAGAGCAGGAATTGAAAAAAATCTTCAAGA TAAATGGGGCGATCGGGTTAAAGTTTTTAAAGCTTTTAATTTCTGCGCTCCCTACTTACCAGAACAAGTATTAAATCAAA TTAAATCTGAAGGTTTTGATAAGTTATTGATTTATCCTTTGTTAGTAGTTGATTCTATTTTTACTAGTGGTATTGCTGTT GAACAAGTTAATAAAGCATTGGTAAAATTAGCAGATAAAAATGAACATTGGATTAAAGGTCAACGTTATATTCCTTCTTT TTATAATGAACCTGATTATATTAATTTAATGGCAAAAATGGTAGAAGAACAGATTGCTAATGATTTAGCGGTTGCTCATT TACCATCTCAAATTGGTATTGTTTTAACAAATCATGGCTGCCCTCATAAAGCTAAAGGTTTTACTTCTGGAATTGATGAA AGTCAAACACTTTATGAGTTGGTGCGGGAACGTTTAATTAATCGTTTTGCTTTAATTTCTGTGGGTTGGTTAAACCATGA TACTCCACTTATTGAATGGACTCAACCAGATGCTAAAACTGCAGCTCAAAATCTGATAGAATTAGGTGCAACAGCTATTA TATTTATGCCTATTGGTTTTGCTACGGAAAATCACGAAACCTTATTAGATGTTGAGCATATTATTGAAGGTTTGCGTCGA AAATATCCTGAAGTAACTTATCGGCAAATGCCTTGTGTTAATGACCGCTCAGAATTTTTGCAGATGGCTGGGGAGTGGGC CAATCTTTATATTGAGGAATTATTGAGTGAAAATGCTTTAGCTGTTAACCCTTCTTTGGCCCTAGCACAGGCAAAGTCGA CTCATGGTCATAGTCACGATGGAGACCATGGTCATTCTCACGGCGATCATCACCATCATGGTCACCACCACCATCATCAT CATTAG
Upstream 100 bases:
>100_bases CACCCATCCCCCCGGTGGGGAATGCTAAACTAACTCAAGAGTCAAATTACTCATGTTCTTTAATTAAGTTAATTAATAAA TATAACTAAAGGAGCAAAAC
Downstream 100 bases:
>100_bases ATGTGTCTAGAAAAGGTTCTAATTCTCTTATCTTGCTCTTTTTAAGTTGGCATTTTTGGAAAGCTATAAACTTGGAGAAG TTTTTACCAACTAGACAAAA
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MVTTPEKIENRKNSISPNQNRQDRVAVLLMGYGEVESYEDFANYNEQALNLLTAKFAPVPTWIYPPLAKLLAIFDLHEWS HQHGNFISPHNAIFESQRAGIEKNLQDKWGDRVKVFKAFNFCAPYLPEQVLNQIKSEGFDKLLIYPLLVVDSIFTSGIAV EQVNKALVKLADKNEHWIKGQRYIPSFYNEPDYINLMAKMVEEQIANDLAVAHLPSQIGIVLTNHGCPHKAKGFTSGIDE SQTLYELVRERLINRFALISVGWLNHDTPLIEWTQPDAKTAAQNLIELGATAIIFMPIGFATENHETLLDVEHIIEGLRR KYPEVTYRQMPCVNDRSEFLQMAGEWANLYIEELLSENALAVNPSLALAQAKSTHGHSHDGDHGHSHGDHHHHGHHHHHH H
Sequences:
>Translated_401_residues MVTTPEKIENRKNSISPNQNRQDRVAVLLMGYGEVESYEDFANYNEQALNLLTAKFAPVPTWIYPPLAKLLAIFDLHEWS HQHGNFISPHNAIFESQRAGIEKNLQDKWGDRVKVFKAFNFCAPYLPEQVLNQIKSEGFDKLLIYPLLVVDSIFTSGIAV EQVNKALVKLADKNEHWIKGQRYIPSFYNEPDYINLMAKMVEEQIANDLAVAHLPSQIGIVLTNHGCPHKAKGFTSGIDE SQTLYELVRERLINRFALISVGWLNHDTPLIEWTQPDAKTAAQNLIELGATAIIFMPIGFATENHETLLDVEHIIEGLRR KYPEVTYRQMPCVNDRSEFLQMAGEWANLYIEELLSENALAVNPSLALAQAKSTHGHSHDGDHGHSHGDHHHHGHHHHHH H >Mature_401_residues MVTTPEKIENRKNSISPNQNRQDRVAVLLMGYGEVESYEDFANYNEQALNLLTAKFAPVPTWIYPPLAKLLAIFDLHEWS HQHGNFISPHNAIFESQRAGIEKNLQDKWGDRVKVFKAFNFCAPYLPEQVLNQIKSEGFDKLLIYPLLVVDSIFTSGIAV EQVNKALVKLADKNEHWIKGQRYIPSFYNEPDYINLMAKMVEEQIANDLAVAHLPSQIGIVLTNHGCPHKAKGFTSGIDE SQTLYELVRERLINRFALISVGWLNHDTPLIEWTQPDAKTAAQNLIELGATAIIFMPIGFATENHETLLDVEHIIEGLRR KYPEVTYRQMPCVNDRSEFLQMAGEWANLYIEELLSENALAVNPSLALAQAKSTHGHSHDGDHGHSHGDHHHHGHHHHHH H
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 45585; Mature: 45585
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTTPEKIENRKNSISPNQNRQDRVAVLLMGYGEVESYEDFANYNEQALNLLTAKFAPVP CCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHCCCCC TWIYPPLAKLLAIFDLHEWSHQHGNFISPHNAIFESQRAGIEKNLQDKWGDRVKVFKAFN CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH FCAPYLPEQVLNQIKSEGFDKLLIYPLLVVDSIFTSGIAVEQVNKALVKLADKNEHWIKG HHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC QRYIPSFYNEPDYINLMAKMVEEQIANDLAVAHLPSQIGIVLTNHGCPHKAKGFTSGIDE CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCC SQTLYELVRERLINRFALISVGWLNHDTPLIEWTQPDAKTAAQNLIELGATAIIFMPIGF HHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC ATENHETLLDVEHIIEGLRRKYPEVTYRQMPCVNDRSEFLQMAGEWANLYIEELLSENAL CCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE AVNPSLALAQAKSTHGHSHDGDHGHSHGDHHHHGHHHHHHH EECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVTTPEKIENRKNSISPNQNRQDRVAVLLMGYGEVESYEDFANYNEQALNLLTAKFAPVP CCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHCCCCC TWIYPPLAKLLAIFDLHEWSHQHGNFISPHNAIFESQRAGIEKNLQDKWGDRVKVFKAFN CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH FCAPYLPEQVLNQIKSEGFDKLLIYPLLVVDSIFTSGIAVEQVNKALVKLADKNEHWIKG HHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC QRYIPSFYNEPDYINLMAKMVEEQIANDLAVAHLPSQIGIVLTNHGCPHKAKGFTSGIDE CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCC SQTLYELVRERLINRFALISVGWLNHDTPLIEWTQPDAKTAAQNLIELGATAIIFMPIGF HHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC ATENHETLLDVEHIIEGLRRKYPEVTYRQMPCVNDRSEFLQMAGEWANLYIEELLSENAL CCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE AVNPSLALAQAKSTHGHSHDGDHGHSHGDHHHHGHHHHHHH EECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA