Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474436

Identifier: 113474436

GI number: 113474436

Start: 930908

End: 931135

Strand: Direct

Name: 113474436

Synonym: Tery_0579

Alternate gene names: NA

Gene position: 930908-931135 (Clockwise)

Preceding gene: 113474435

Following gene: 113474438

Centisome position: 12.01

GC content: 40.79

Gene sequence:

>228_bases
ATGCCACATACAATTGTTACTAATATTTGCGAAGGTGTTGCTGACTGTGCTAATGCCTGTCCAGTTGCTTGTATCCATTC
AGGGCCAGGTAAAAATAATAAGGGAACTGATTGGTATTGGGTTGATTTTGATTCCTGTATTGACTGCGGAATTTGTTTGG
AAGTTTGTCCTGTAGAAAAAGCAGTACTTGCTGAGGAAAGACCTGAATTACAGCAGACTCCAGAGTAG

Upstream 100 bases:

>100_bases
TTAATAATTAAAGCCTTGTTTAAGTATAGTATTATTTTTTTCATCCTTTGGTATAATATAATTTTTGAATTAATAAGTTT
AAACTTTTAAATAAACTAAA

Downstream 100 bases:

>100_bases
CTCTTAGATGGGAAGAATTTAATTAAAAAATAGGGATAAACTTAGTGCTAGTTTGCGATCGCTATTTGATATTATAACAA
CCATTATCCTATAATAAATT

Product: 4Fe-4S ferredoxin, iron-sulfur binding

Products: NA

Alternate protein names: Ferredoxin-Like Protein; Ferredoxin 4Fe-4S; Ferredoxin Like Protein; NADHUbiquinone Oxidoreductase Chain I-Like Protein

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MPHTIVTNICEGVADCANACPVACIHSGPGKNNKGTDWYWVDFDSCIDCGICLEVCPVEKAVLAEERPELQQTPE

Sequences:

>Translated_75_residues
MPHTIVTNICEGVADCANACPVACIHSGPGKNNKGTDWYWVDFDSCIDCGICLEVCPVEKAVLAEERPELQQTPE
>Mature_74_residues
PHTIVTNICEGVADCANACPVACIHSGPGKNNKGTDWYWVDFDSCIDCGICLEVCPVEKAVLAEERPELQQTPE

Specific function: Unknown

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8136; Mature: 8005

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
12.0 %Cys+Met (Translated Protein)
10.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
10.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHTIVTNICEGVADCANACPVACIHSGPGKNNKGTDWYWVDFDSCIDCGICLEVCPVEK
CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECHHHHCCCCCEECCCCCH
AVLAEERPELQQTPE
HHHHHCCCCCCCCCC
>Mature Secondary Structure 
PHTIVTNICEGVADCANACPVACIHSGPGKNNKGTDWYWVDFDSCIDCGICLEVCPVEK
CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECHHHHCCCCCEECCCCCH
AVLAEERPELQQTPE
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA