Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is yfcK [C]

Identifier: 113474419

GI number: 113474419

Start: 877194

End: 878096

Strand: Direct

Name: yfcK [C]

Synonym: Tery_0559

Alternate gene names: 113474419

Gene position: 877194-878096 (Clockwise)

Preceding gene: 113474414

Following gene: 113474420

Centisome position: 11.32

GC content: 38.76

Gene sequence:

>903_bases
ATGATAATTAATGTTCAGGAGGAAGAATTGAAAGATTACAGATTTATACCACAACTAACAGCAGATGGCTCATGGACCTT
TTTTTCTCCCGAATTTGGTGAAACCTTTCACTCTTATTTTGGCGCTCAACAAGAAGCAGAATATAAATTTGTTGATCCAG
TTCAACTATTATCTAGAGTAGATAGATCTGTAGTTTATTTACTTGACGTTTGTTATGGACTAGGATATAATACAGCTTCA
GCTTTGGCAGCTATTTGGAGAATTAACCCTAGCTGCAAAATCATACAGGTAGGACTAGAGTTAGACCCAGAAGTACCAAA
AGCAGCGATCGCCAAAGGTCTTTTAGATAATTGGCCTGATCCTGTGCCAGAATTATTATCTACATATGGCCAAACCCATG
AATTACAAACAGAGAAAATAGAGGCCAAGCTCCTAATAGGAGATGCAAGGACAACTATTCAACAATTAAGTAATTTTAGC
TTCCATACAGATGCTATATTTCTAGACCCCTTTTCACCACCCAGTTGTCCTCAACTCTGGACAGTAGAATTTTTATCTTT
AGTGAGTAGTTGTCTAAAGCCTGATGGTATTCTGGCAACATATTCCTGTTCTGCAGCAGTCAGAACAGCATTACTTGAAG
CTGGTTTAAAAATTGGTTCTACAATACCAGTAGGTAGGCGATCGCCAGGAACAGTGGCCAGTTTTGTGGCTCAAAATTTA
CCCCCACTTTCAGACAAGGAAAAAGAACACTTACTTACTCGGGCTAGTATTCCTTACCGTGACCCACAACTATCAGACTC
TAGTGAAATTATTGCGCATCGCCGTGAGTTAGAACAACAAAAATCATCCTTAGAACCGACATCTCATTGGAAAAAACGCT
GGTCTAGAAAAGTTAAAAGTTAA

Upstream 100 bases:

>100_bases
GGTGATAATAAAAGTCAAAAAATAAAGCATAATTAAAGCTTTTAAGCAAGAACTAGGATGACGAAAACATATTGGTAAGT
AGTATTTTTTCGGTTTGTTC

Downstream 100 bases:

>100_bases
AAGTAATAATGCAGCCATAAAAATTTTTGAGTTACCACAAAAAGTTTCTCATAGAAAAGAGATAATAGGATAAACCAAAG
ACGACACTAGGGGAAAGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MIINVQEEELKDYRFIPQLTADGSWTFFSPEFGETFHSYFGAQQEAEYKFVDPVQLLSRVDRSVVYLLDVCYGLGYNTAS
ALAAIWRINPSCKIIQVGLELDPEVPKAAIAKGLLDNWPDPVPELLSTYGQTHELQTEKIEAKLLIGDARTTIQQLSNFS
FHTDAIFLDPFSPPSCPQLWTVEFLSLVSSCLKPDGILATYSCSAAVRTALLEAGLKIGSTIPVGRRSPGTVASFVAQNL
PPLSDKEKEHLLTRASIPYRDPQLSDSSEIIAHRRELEQQKSSLEPTSHWKKRWSRKVKS

Sequences:

>Translated_300_residues
MIINVQEEELKDYRFIPQLTADGSWTFFSPEFGETFHSYFGAQQEAEYKFVDPVQLLSRVDRSVVYLLDVCYGLGYNTAS
ALAAIWRINPSCKIIQVGLELDPEVPKAAIAKGLLDNWPDPVPELLSTYGQTHELQTEKIEAKLLIGDARTTIQQLSNFS
FHTDAIFLDPFSPPSCPQLWTVEFLSLVSSCLKPDGILATYSCSAAVRTALLEAGLKIGSTIPVGRRSPGTVASFVAQNL
PPLSDKEKEHLLTRASIPYRDPQLSDSSEIIAHRRELEQQKSSLEPTSHWKKRWSRKVKS
>Mature_300_residues
MIINVQEEELKDYRFIPQLTADGSWTFFSPEFGETFHSYFGAQQEAEYKFVDPVQLLSRVDRSVVYLLDVCYGLGYNTAS
ALAAIWRINPSCKIIQVGLELDPEVPKAAIAKGLLDNWPDPVPELLSTYGQTHELQTEKIEAKLLIGDARTTIQQLSNFS
FHTDAIFLDPFSPPSCPQLWTVEFLSLVSSCLKPDGILATYSCSAAVRTALLEAGLKIGSTIPVGRRSPGTVASFVAQNL
PPLSDKEKEHLLTRASIPYRDPQLSDSSEIIAHRRELEQQKSSLEPTSHWKKRWSRKVKS

Specific function: Unknown

COG id: COG4121

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008471 [H]

Pfam domain/function: PF05430 DUF752 [H]

EC number: NA

Molecular weight: Translated: 33571; Mature: 33571

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIINVQEEELKDYRFIPQLTADGSWTFFSPEFGETFHSYFGAQQEAEYKFVDPVQLLSRV
CEECCCHHHHHHHHHCCCEECCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
DRSVVYLLDVCYGLGYNTASALAAIWRINPSCKIIQVGLELDPEVPKAAIAKGLLDNWPD
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCC
PVPELLSTYGQTHELQTEKIEAKLLIGDARTTIQQLSNFSFHTDAIFLDPFSPPSCPQLW
CHHHHHHHHCCCCCHHHHHHEEEEEECHHHHHHHHHHCCCEECCEEEECCCCCCCCCHHH
TVEFLSLVSSCLKPDGILATYSCSAAVRTALLEAGLKIGSTIPVGRRSPGTVASFVAQNL
HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
PPLSDKEKEHLLTRASIPYRDPQLSDSSEIIAHRRELEQQKSSLEPTSHWKKRWSRKVKS
CCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIINVQEEELKDYRFIPQLTADGSWTFFSPEFGETFHSYFGAQQEAEYKFVDPVQLLSRV
CEECCCHHHHHHHHHCCCEECCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
DRSVVYLLDVCYGLGYNTASALAAIWRINPSCKIIQVGLELDPEVPKAAIAKGLLDNWPD
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCC
PVPELLSTYGQTHELQTEKIEAKLLIGDARTTIQQLSNFSFHTDAIFLDPFSPPSCPQLW
CHHHHHHHHCCCCCHHHHHHEEEEEECHHHHHHHHHHCCCEECCEEEECCCCCCCCCHHH
TVEFLSLVSSCLKPDGILATYSCSAAVRTALLEAGLKIGSTIPVGRRSPGTVASFVAQNL
HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
PPLSDKEKEHLLTRASIPYRDPQLSDSSEIIAHRRELEQQKSSLEPTSHWKKRWSRKVKS
CCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]