Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474418

Identifier: 113474418

GI number: 113474418

Start: 875936

End: 877123

Strand: Reverse

Name: 113474418

Synonym: Tery_0558

Alternate gene names: NA

Gene position: 877123-875936 (Counterclockwise)

Preceding gene: 113474424

Following gene: 113474417

Centisome position: 11.32

GC content: 28.62

Gene sequence:

>1188_bases
ATGCTTTATTTTTTGACTTTTATTATCACCATAATTAGAGATTTTGAACTAGGAGTATATTTTGAGGAACAACTCGGGGG
CAGTTTAGAAATATTGGTTTGTTTGAGTATTATTATTTTATTTTTTTGGATTCCTGTTTTTGCATTTGCACATCATTTTT
TTATTTTATTCTTTCATACTATTCGGCAAACTTTTTCTAAAAGATATCGTTATAATTTATTTTTTTTTCCAGTGACTATA
AGTTGGTGGAAAGCTTTATATAGCTGGTTAGTTACTATTATTAGTACCTTAGCAGCTATTTTAGTATCTACATTGATCCT
ACCTTGGTTTAACCTAAATTACACAGTTTTTATCTTAGAAAACAATCGTTTTTTATATCCTAATTCAGTTATTGATAAGT
TGCTTTTATTTGTATTTGTTAGTGTTTGGCTAATAGTCGCTACTAAATTATATCAATTTGAATTTATATCAAACAAAAAA
AATATGTTAAGTAAAAAAAATCATTATGCTCCAGCTAAAACTTCCAAAGTTTATCCCAAAAATAAAAATAAACCCCAAAT
TAATGTTAATAATCTAGATAATCAACCAGCAAAATATAGCACTTATTATGGAGTAAACAAAATCAAAAAATCACAACGTC
CCCGTAATATTGTCTACAGTAAAAAACCAAATAAATCTCAAAATTCTTATATAAAAAAAATACAGAAAACTATTAAACGT
AATTTTTTAATATTACTAATTCTTCCCATACTTGGATTAGGTATATATTGGTTTTCTACATGGAAATTAGTTTCTAAAAC
TGCTGTAGTTGTAGAAAATGAAATTCCTTCGTCAATACCAAAAAAAGTTAATTCTGAAAACCCAGAAGTTAGAGAGGTAA
AAACTAAATCTATATCTCTATCTTCTCCAGGAAAACAATCTGCATCCGTGACGACAAAAACTATTGTTTTACCACCACCT
GACCCATTTATATTAGCAGTTAACCGAGCTATGAATGCAGCAGAAATGGCACAGTCTGCCCAATCTAAAATAGAATGGGA
AGCAGTAGCAAGTCAGTGGCAAGACGCAACAGAATTAATGAAAATTGTCCCTCCATCTCATCCTAAATATAAGAAAGCTA
GAAAAAAAATTAACGAATATCAAAGTTACACTAATTATGCTATTAGAGTGGGGAAAACTAATAGGTAA

Upstream 100 bases:

>100_bases
CAATTCTTCCTCCTGAACATTAATTATCATGAACAAACCGAAAAAATACTACTTACCAATATGTTTTCGTCATCCTAGTT
CTTGCTTAAAAGCTTTAATT

Downstream 100 bases:

>100_bases
AGGTAAAACAAAGGAAGAAAAAGAGAAATAATACTAATTTATCAAATATTACTAGAGTTACAGCTTATGCAGAAAAGTCG
TAAATAGAATCTGATCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MLYFLTFIITIIRDFELGVYFEEQLGGSLEILVCLSIIILFFWIPVFAFAHHFFILFFHTIRQTFSKRYRYNLFFFPVTI
SWWKALYSWLVTIISTLAAILVSTLILPWFNLNYTVFILENNRFLYPNSVIDKLLLFVFVSVWLIVATKLYQFEFISNKK
NMLSKKNHYAPAKTSKVYPKNKNKPQINVNNLDNQPAKYSTYYGVNKIKKSQRPRNIVYSKKPNKSQNSYIKKIQKTIKR
NFLILLILPILGLGIYWFSTWKLVSKTAVVVENEIPSSIPKKVNSENPEVREVKTKSISLSSPGKQSASVTTKTIVLPPP
DPFILAVNRAMNAAEMAQSAQSKIEWEAVASQWQDATELMKIVPPSHPKYKKARKKINEYQSYTNYAIRVGKTNR

Sequences:

>Translated_395_residues
MLYFLTFIITIIRDFELGVYFEEQLGGSLEILVCLSIIILFFWIPVFAFAHHFFILFFHTIRQTFSKRYRYNLFFFPVTI
SWWKALYSWLVTIISTLAAILVSTLILPWFNLNYTVFILENNRFLYPNSVIDKLLLFVFVSVWLIVATKLYQFEFISNKK
NMLSKKNHYAPAKTSKVYPKNKNKPQINVNNLDNQPAKYSTYYGVNKIKKSQRPRNIVYSKKPNKSQNSYIKKIQKTIKR
NFLILLILPILGLGIYWFSTWKLVSKTAVVVENEIPSSIPKKVNSENPEVREVKTKSISLSSPGKQSASVTTKTIVLPPP
DPFILAVNRAMNAAEMAQSAQSKIEWEAVASQWQDATELMKIVPPSHPKYKKARKKINEYQSYTNYAIRVGKTNR
>Mature_395_residues
MLYFLTFIITIIRDFELGVYFEEQLGGSLEILVCLSIIILFFWIPVFAFAHHFFILFFHTIRQTFSKRYRYNLFFFPVTI
SWWKALYSWLVTIISTLAAILVSTLILPWFNLNYTVFILENNRFLYPNSVIDKLLLFVFVSVWLIVATKLYQFEFISNKK
NMLSKKNHYAPAKTSKVYPKNKNKPQINVNNLDNQPAKYSTYYGVNKIKKSQRPRNIVYSKKPNKSQNSYIKKIQKTIKR
NFLILLILPILGLGIYWFSTWKLVSKTAVVVENEIPSSIPKKVNSENPEVREVKTKSISLSSPGKQSASVTTKTIVLPPP
DPFILAVNRAMNAAEMAQSAQSKIEWEAVASQWQDATELMKIVPPSHPKYKKARKKINEYQSYTNYAIRVGKTNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45932; Mature: 45932

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYFLTFIITIIRDFELGVYFEEQLGGSLEILVCLSIIILFFWIPVFAFAHHFFILFFHT
CHHHHHHHHHHHHHHHCCEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRQTFSKRYRYNLFFFPVTISWWKALYSWLVTIISTLAAILVSTLILPWFNLNYTVFILE
HHHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
NNRFLYPNSVIDKLLLFVFVSVWLIVATKLYQFEFISNKKNMLSKKNHYAPAKTSKVYPK
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCC
NKNKPQINVNNLDNQPAKYSTYYGVNKIKKSQRPRNIVYSKKPNKSQNSYIKKIQKTIKR
CCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
NFLILLILPILGLGIYWFSTWKLVSKTAVVVENEIPSSIPKKVNSENPEVREVKTKSISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCCCCCHHHHHHCEEEC
SSPGKQSASVTTKTIVLPPPDPFILAVNRAMNAAEMAQSAQSKIEWEAVASQWQDATELM
CCCCCCCCCEEEEEEEECCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIVPPSHPKYKKARKKINEYQSYTNYAIRVGKTNR
HHCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCC
>Mature Secondary Structure
MLYFLTFIITIIRDFELGVYFEEQLGGSLEILVCLSIIILFFWIPVFAFAHHFFILFFHT
CHHHHHHHHHHHHHHHCCEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRQTFSKRYRYNLFFFPVTISWWKALYSWLVTIISTLAAILVSTLILPWFNLNYTVFILE
HHHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
NNRFLYPNSVIDKLLLFVFVSVWLIVATKLYQFEFISNKKNMLSKKNHYAPAKTSKVYPK
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCC
NKNKPQINVNNLDNQPAKYSTYYGVNKIKKSQRPRNIVYSKKPNKSQNSYIKKIQKTIKR
CCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
NFLILLILPILGLGIYWFSTWKLVSKTAVVVENEIPSSIPKKVNSENPEVREVKTKSISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCCCCCHHHHHHCEEEC
SSPGKQSASVTTKTIVLPPPDPFILAVNRAMNAAEMAQSAQSKIEWEAVASQWQDATELM
CCCCCCCCCEEEEEEEECCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIVPPSHPKYKKARKKINEYQSYTNYAIRVGKTNR
HHCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA