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The map label for this gene is fraH [H]

Identifier: 113474398

GI number: 113474398

Start: 845869

End: 846687

Strand: Reverse

Name: fraH [H]

Synonym: Tery_0534

Alternate gene names: 113474398

Gene position: 846687-845869 (Counterclockwise)

Preceding gene: 113474399

Following gene: 113474397

Centisome position: 10.92

GC content: 39.32

Gene sequence:

>819_bases
ATGATTGTCTGTCCTAATTGCAACTATCAGAATCCTGATGGAGCAAACCAATGTGAAAGCTGTTACACTCCCTTACCAGT
GACTACAAATTGTTATAATTGTGGGGCAATAGTTCAAGCTGATGCTGCCTTTTGTGGTCAATGTGGTGTAGACCTGAAAG
GTAGTGCTAATACAGAGGAAGGTCAAATTTTATCCCAAACAGATCCAATACCGGTGCCAACTGCAGTATCAGCCATGCCT
GAACCAGATACAAATATACCTATAAACATACCTCAGCTAGACCTACCAGAACCATTAGTGACACCAGAACCTTTGCTTTC
TGGAACAGTTAACTTAGAAAAATCTAGCAACCCTAAGACTCCAATTCCTATTCAGAAAGAGGAGCCCCCAACAACAACTA
ATACTGTTAGCACGCCTGTGGCTACTCCAATAGTAAGTTCTCCTGCTCCCAATGGCGGAAAAGCAATTCCGGTAAGGACC
CAGTTGCAAAATATGTCTGCTAAGTTGCTCCACGTCAGAACAGATACAAATATTGAATTACCAATTAATTTATCTGTGAT
TCATGTTGGTAAACCTAATGACAAGGTACCTCCAGATATTGATGTTTCAGGATTTCCTGACTCTGAAGTAGTTTCTCGGA
GTCATGCTGATATTAGAGTAGAAGGAGATAGTTATTATATTGAAGATACTGGTAGTTCCAATGGTACTTATATCAATAAT
ACTCCTTTGACAAAAGGAAATAGACATAAGTTAAGACCAGGTGATCGGATATCTTTAGGGAAAGGAGACTTAGTTTCATT
CCTTTTTCAAATTTCTTAG

Upstream 100 bases:

>100_bases
TCACAAGGAATCCCGCAGTGCCCCCTAACCCCTAATTATACTTTTGGCAGGATGTCAATTTTGTATTTTAATCATCTGAG
CGATAGCAAGGAGAAGATAA

Downstream 100 bases:

>100_bases
TTAAGTGTTAGACCATGGCTTGATTAAAATCCTTAGCTCATGGTTTTTCTATATATAATTCGGTTTTTTTAGAAGAACCT
CAGGTTTGTTAGGGTTTCGC

Product: FHA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MIVCPNCNYQNPDGANQCESCYTPLPVTTNCYNCGAIVQADAAFCGQCGVDLKGSANTEEGQILSQTDPIPVPTAVSAMP
EPDTNIPINIPQLDLPEPLVTPEPLLSGTVNLEKSSNPKTPIPIQKEEPPTTTNTVSTPVATPIVSSPAPNGGKAIPVRT
QLQNMSAKLLHVRTDTNIELPINLSVIHVGKPNDKVPPDIDVSGFPDSEVVSRSHADIRVEGDSYYIEDTGSSNGTYINN
TPLTKGNRHKLRPGDRISLGKGDLVSFLFQIS

Sequences:

>Translated_272_residues
MIVCPNCNYQNPDGANQCESCYTPLPVTTNCYNCGAIVQADAAFCGQCGVDLKGSANTEEGQILSQTDPIPVPTAVSAMP
EPDTNIPINIPQLDLPEPLVTPEPLLSGTVNLEKSSNPKTPIPIQKEEPPTTTNTVSTPVATPIVSSPAPNGGKAIPVRT
QLQNMSAKLLHVRTDTNIELPINLSVIHVGKPNDKVPPDIDVSGFPDSEVVSRSHADIRVEGDSYYIEDTGSSNGTYINN
TPLTKGNRHKLRPGDRISLGKGDLVSFLFQIS
>Mature_272_residues
MIVCPNCNYQNPDGANQCESCYTPLPVTTNCYNCGAIVQADAAFCGQCGVDLKGSANTEEGQILSQTDPIPVPTAVSAMP
EPDTNIPINIPQLDLPEPLVTPEPLLSGTVNLEKSSNPKTPIPIQKEEPPTTTNTVSTPVATPIVSSPAPNGGKAIPVRT
QLQNMSAKLLHVRTDTNIELPINLSVIHVGKPNDKVPPDIDVSGFPDSEVVSRSHADIRVEGDSYYIEDTGSSNGTYINN
TPLTKGNRHKLRPGDRISLGKGDLVSFLFQIS

Specific function: Putative heterocyst to vegetative cell connection [H]

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FHA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000253
- InterPro:   IPR008984 [H]

Pfam domain/function: PF00498 FHA [H]

EC number: NA

Molecular weight: Translated: 28977; Mature: 28977

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVCPNCNYQNPDGANQCESCYTPLPVTTNCYNCGAIVQADAAFCGQCGVDLKGSANTEE
CEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCCCCC
GQILSQTDPIPVPTAVSAMPEPDTNIPINIPQLDLPEPLVTPEPLLSGTVNLEKSSNPKT
CEEEECCCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHCCEEEEECCCCCCC
PIPIQKEEPPTTTNTVSTPVATPIVSSPAPNGGKAIPVRTQLQNMSAKLLHVRTDTNIEL
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEHHHHHCCCEEEEEEECCCCEEE
PINLSVIHVGKPNDKVPPDIDVSGFPDSEVVSRSHADIRVEGDSYYIEDTGSSNGTYINN
EEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCEEEEEECCCCCCCEEEC
TPLTKGNRHKLRPGDRISLGKGDLVSFLFQIS
CCCCCCCCCCCCCCCEEECCCCHHHHHHEECC
>Mature Secondary Structure
MIVCPNCNYQNPDGANQCESCYTPLPVTTNCYNCGAIVQADAAFCGQCGVDLKGSANTEE
CEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCCCCC
GQILSQTDPIPVPTAVSAMPEPDTNIPINIPQLDLPEPLVTPEPLLSGTVNLEKSSNPKT
CEEEECCCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHCCEEEEECCCCCCC
PIPIQKEEPPTTTNTVSTPVATPIVSSPAPNGGKAIPVRTQLQNMSAKLLHVRTDTNIEL
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEHHHHHCCCEEEEEEECCCCEEE
PINLSVIHVGKPNDKVPPDIDVSGFPDSEVVSRSHADIRVEGDSYYIEDTGSSNGTYINN
EEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCEEEEEECCCCCCCEEEC
TPLTKGNRHKLRPGDRISLGKGDLVSFLFQIS
CCCCCCCCCCCCCCCEEECCCCHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]