| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113474397
Identifier: 113474397
GI number: 113474397
Start: 844596
End: 845066
Strand: Reverse
Name: 113474397
Synonym: Tery_0533
Alternate gene names: NA
Gene position: 845066-844596 (Counterclockwise)
Preceding gene: 113474398
Following gene: 113474396
Centisome position: 10.9
GC content: 31.85
Gene sequence:
>471_bases ATGAGAATAACACTAGTGCATCCACTTCAGGCTATGCCAGTTAGAAGCTGGACTTTTGATCATCAACCGATCATTAAGAT TGGGCGTTCTCCAAATAATGACGTAGTTCTTTATAGTTCCGTGGTTTCTCGTTATCATGTTGAATTAAAAAGTGATCATG ATCACTGGGAAATTATTAATTTAGGTCGCAATGGTACATACATTGATGGTAAACCAATCACGAAAGTTAAGCTAGTCAAT GGGTTGATAATTAATTTAGCTATGAGTGGACCTAAAGTTGCTATATATCTCCAGGAGCAATCAAAAGAAGTTAATTTGAA ACAAAGGAAAAATTATTACTTACAAAGAAAAAAAGAAAAACTTGAAGTTCCCCTATTAAGCACAACATTTGATCCCAAAT CTCAGCAACAAGAATTATTTAAAAATACAAAATCTAAAAAGACAGATAGAAAAATAGTTTTATCTTTTTAA
Upstream 100 bases:
>100_bases AATTTTTCCCACTTTCTGTCATTAGTTTTCTAGCACTACTGAACTAAATCATCTACAATTGTCTTAGACTGCTCTACTAA AACCTTAAATAACAGATGTG
Downstream 100 bases:
>100_bases TAGAATTAATTTTGATTTTTTTTATTTTTACCTATATTAGAGTCTAAAGCTTCGTCCTTCTGGAATAGCTATTTAATACA AGTAGCATTACATATAAGTT
Product: FHA domain-containing protein
Products: NA
Alternate protein names: Serine/Threonine Kinase Protein; Serine/Threonine Protein Kinase; Serine/Threonine Protein Kinase With FHA Domain Protein; FHA Domain Containing Protein; Serine/Threonine Kinase; Forkhead-Associated Protein; Protein Kinase Domain; FHA Domain Protein
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MRITLVHPLQAMPVRSWTFDHQPIIKIGRSPNNDVVLYSSVVSRYHVELKSDHDHWEIINLGRNGTYIDGKPITKVKLVN GLIINLAMSGPKVAIYLQEQSKEVNLKQRKNYYLQRKKEKLEVPLLSTTFDPKSQQQELFKNTKSKKTDRKIVLSF
Sequences:
>Translated_156_residues MRITLVHPLQAMPVRSWTFDHQPIIKIGRSPNNDVVLYSSVVSRYHVELKSDHDHWEIINLGRNGTYIDGKPITKVKLVN GLIINLAMSGPKVAIYLQEQSKEVNLKQRKNYYLQRKKEKLEVPLLSTTFDPKSQQQELFKNTKSKKTDRKIVLSF >Mature_156_residues MRITLVHPLQAMPVRSWTFDHQPIIKIGRSPNNDVVLYSSVVSRYHVELKSDHDHWEIINLGRNGTYIDGKPITKVKLVN GLIINLAMSGPKVAIYLQEQSKEVNLKQRKNYYLQRKKEKLEVPLLSTTFDPKSQQQELFKNTKSKKTDRKIVLSF
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18127; Mature: 18127
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITLVHPLQAMPVRSWTFDHQPIIKIGRSPNNDVVLYSSVVSRYHVELKSDHDHWEIIN CEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEHHHHHEEEEECCCCCCEEEEE LGRNGTYIDGKPITKVKLVNGLIINLAMSGPKVAIYLQEQSKEVNLKQRKNYYLQRKKEK ECCCCCEECCCCCEEEEEECEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH LEVPLLSTTFDPKSQQQELFKNTKSKKTDRKIVLSF CCCCEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEC >Mature Secondary Structure MRITLVHPLQAMPVRSWTFDHQPIIKIGRSPNNDVVLYSSVVSRYHVELKSDHDHWEIIN CEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEHHHHHEEEEECCCCCCEEEEE LGRNGTYIDGKPITKVKLVNGLIINLAMSGPKVAIYLQEQSKEVNLKQRKNYYLQRKKEK ECCCCCEECCCCCEEEEEECEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH LEVPLLSTTFDPKSQQQELFKNTKSKKTDRKIVLSF CCCCEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA