Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474388

Identifier: 113474388

GI number: 113474388

Start: 829610

End: 830479

Strand: Direct

Name: 113474388

Synonym: Tery_0524

Alternate gene names: NA

Gene position: 829610-830479 (Clockwise)

Preceding gene: 113474385

Following gene: 113474389

Centisome position: 10.7

GC content: 36.32

Gene sequence:

>870_bases
ATGGTCAAAACCAAAAACACCCTTTTGTCTCATACTGATTTAGTAAAATCCTATTTGGACATTGAAGTACTAGGGCAAGT
TATGACAAAAAATTCTGACTCACAAGATGAGTATCTAGCTAAAATTAGGAATGTTTGTAATGGGAGTGCTGAAGATTTAG
AACTATATGAGGCGATCGCTAACTTTTGTCGGCAAACCAATGATAGAAAGCGCCGTCTAGCATTTGTTCCTTTATTTAAG
AAAATTGAAAAATTAAGAGGACTAAAAAAAGTTAGCAATTCTAGCGAGTATTATCATGACTACCAAGATATATTGCAGGA
GACTTGGGAAGAGTTTTACAAAAAGTTTCCCGCTGAGTTTGAACCTGCAGGCCAATCTTTAAAAGGAAGTTTGGTAACTT
GGATTAACGAAAAACTGCGTTTGAGATACAAGGTAATAGACTTATATCCCAAGTCTAGAGATGACAATAAAGGAAATAAA
CCCTTAACCCCAAAACAGAGATTTAACCAAATAATCAGAAGTAAACCAAAATCTCTGGATGCTCCTAATAGTACCAATGA
TTTTGATAATGATTTGACCATTGGCGATTTCTTAGAGAGTGAGGACCCTGGACCTCTGGAGGAGGCTATTGGGGAAGAGC
AAAAACAAAACATTAATATGTTCTTGGAAATAGTCAAGGATAGTAAATATCATATGCGCAGCTGTCCCGAATGTACTTTT
CAGGCTGTTGCTCAACGTCTTTTTTTTGAGGAACCTTCGAAAAATTTGAAGCAAGTTGCATTGGAGTTCGGAGTTAATTA
TAGTAGTTTACGGACTTTTTGGCTACGGACTTGTAAGAAAATTTCTCAGGAACTATCCCCAGAACTATAA

Upstream 100 bases:

>100_bases
CAAAATACTTGCAACAACAAGGAAAAAACTCTGAGAGAAGAATATGGGCTTTAGGTTTTCTCTGAAAACTAAACAAAGTA
GGAAGGGGCGATAAGTAAAT

Downstream 100 bases:

>100_bases
CAAAATTTACAAGAATTAATTCAGGAGAAATAACTATGCAAACAGAAACTTTTGGGCTAAAAATACCTATTACTGAAGAT
GCTCGCCGATACGCTGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MVKTKNTLLSHTDLVKSYLDIEVLGQVMTKNSDSQDEYLAKIRNVCNGSAEDLELYEAIANFCRQTNDRKRRLAFVPLFK
KIEKLRGLKKVSNSSEYYHDYQDILQETWEEFYKKFPAEFEPAGQSLKGSLVTWINEKLRLRYKVIDLYPKSRDDNKGNK
PLTPKQRFNQIIRSKPKSLDAPNSTNDFDNDLTIGDFLESEDPGPLEEAIGEEQKQNINMFLEIVKDSKYHMRSCPECTF
QAVAQRLFFEEPSKNLKQVALEFGVNYSSLRTFWLRTCKKISQELSPEL

Sequences:

>Translated_289_residues
MVKTKNTLLSHTDLVKSYLDIEVLGQVMTKNSDSQDEYLAKIRNVCNGSAEDLELYEAIANFCRQTNDRKRRLAFVPLFK
KIEKLRGLKKVSNSSEYYHDYQDILQETWEEFYKKFPAEFEPAGQSLKGSLVTWINEKLRLRYKVIDLYPKSRDDNKGNK
PLTPKQRFNQIIRSKPKSLDAPNSTNDFDNDLTIGDFLESEDPGPLEEAIGEEQKQNINMFLEIVKDSKYHMRSCPECTF
QAVAQRLFFEEPSKNLKQVALEFGVNYSSLRTFWLRTCKKISQELSPEL
>Mature_289_residues
MVKTKNTLLSHTDLVKSYLDIEVLGQVMTKNSDSQDEYLAKIRNVCNGSAEDLELYEAIANFCRQTNDRKRRLAFVPLFK
KIEKLRGLKKVSNSSEYYHDYQDILQETWEEFYKKFPAEFEPAGQSLKGSLVTWINEKLRLRYKVIDLYPKSRDDNKGNK
PLTPKQRFNQIIRSKPKSLDAPNSTNDFDNDLTIGDFLESEDPGPLEEAIGEEQKQNINMFLEIVKDSKYHMRSCPECTF
QAVAQRLFFEEPSKNLKQVALEFGVNYSSLRTFWLRTCKKISQELSPEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33665; Mature: 33665

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKTKNTLLSHTDLVKSYLDIEVLGQVMTKNSDSQDEYLAKIRNVCNGSAEDLELYEAIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
NFCRQTNDRKRRLAFVPLFKKIEKLRGLKKVSNSSEYYHDYQDILQETWEEFYKKFPAEF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
EPAGQSLKGSLVTWINEKLRLRYKVIDLYPKSRDDNKGNKPLTPKQRFNQIIRSKPKSLD
CCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
APNSTNDFDNDLTIGDFLESEDPGPLEEAIGEEQKQNINMFLEIVKDSKYHMRSCPECTF
CCCCCCCCCCCCCHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHCCHHHHHCCCHHHH
QAVAQRLFFEEPSKNLKQVALEFGVNYSSLRTFWLRTCKKISQELSPEL
HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVKTKNTLLSHTDLVKSYLDIEVLGQVMTKNSDSQDEYLAKIRNVCNGSAEDLELYEAIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
NFCRQTNDRKRRLAFVPLFKKIEKLRGLKKVSNSSEYYHDYQDILQETWEEFYKKFPAEF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
EPAGQSLKGSLVTWINEKLRLRYKVIDLYPKSRDDNKGNKPLTPKQRFNQIIRSKPKSLD
CCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
APNSTNDFDNDLTIGDFLESEDPGPLEEAIGEEQKQNINMFLEIVKDSKYHMRSCPECTF
CCCCCCCCCCCCCHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHCCHHHHHCCCHHHH
QAVAQRLFFEEPSKNLKQVALEFGVNYSSLRTFWLRTCKKISQELSPEL
HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA