Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is tal [H]

Identifier: 113474384

GI number: 113474384

Start: 824434

End: 825072

Strand: Direct

Name: tal [H]

Synonym: Tery_0519

Alternate gene names: 113474384

Gene position: 824434-825072 (Clockwise)

Preceding gene: 113474383

Following gene: 113474385

Centisome position: 10.64

GC content: 39.12

Gene sequence:

>639_bases
ATGGTTCTTTATCTTGACTCAGCAATAGTAACAGAAGCAAGAGTGGCAAGTAAATTTGGTTGGATATCTGGGGTGACAAC
TAACCCGACTTTGCTGGCAAAAAGTGATTTGTCTCCAGAAGCAACTTTAAAGGAACTTTCAGAAATTATTTCTGGAGAAT
TATATTATCAACTTACTGCTACTAGCTTTGATGAGATGATAGCGGAAGGGAAGGCTGCATCAAAATTAATTGGCCATAAA
ATAGTTCTGAAAATTCCGGCAACTGCTACTGGTTTTCAAGCGACATCTCATTTGTCTAAAAATATTGACTGTTCGGTGAC
CGGAATATATCATCCTGCTCAAGCATTAGTGGCTGCTGAAACAGGCGCTAAATATGCGATCGCTTATGTTAACCGGGCAA
CTAGGCTTTTGGGAGATGGTTTAAAACTGGTGAGAGAGATGGCAAAAGTACTTGAAGGTAGCTCTACAGAAATTTTAGCA
GCAAGTGTGAAGTCTCCTGATGAAGCTACTGAAACTTTATTGGCCGGTGCTCACCATCTAACGTTACCATTTTCTGTGTT
GCAGACAATAACTACCCATGAGTTATCAGAGCAAACTTTTAAGGAGTTTAATGAAAAAGGAAGAGGAATTATGTATTAA

Upstream 100 bases:

>100_bases
ATAGTCGAATATATTTGTCTCTTACTGCCCTCTGTTATAGTCAGCCCAAAGCTATATTTAACTCAAGTTTTTTAGATTAA
TTTTGAATAGGAGAAAAAAA

Downstream 100 bases:

>100_bases
TTGAAAATGATAAAATATCTATAGGAGAAAGCTGATATTGAGGAGAAATATATTTTTTTTAAGTTCATAAAAGGCTTGCT
CCTAGATTTAAAATTTATCA

Product: transaldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MVLYLDSAIVTEARVASKFGWISGVTTNPTLLAKSDLSPEATLKELSEIISGELYYQLTATSFDEMIAEGKAASKLIGHK
IVLKIPATATGFQATSHLSKNIDCSVTGIYHPAQALVAAETGAKYAIAYVNRATRLLGDGLKLVREMAKVLEGSSTEILA
ASVKSPDEATETLLAGAHHLTLPFSVLQTITTHELSEQTFKEFNEKGRGIMY

Sequences:

>Translated_212_residues
MVLYLDSAIVTEARVASKFGWISGVTTNPTLLAKSDLSPEATLKELSEIISGELYYQLTATSFDEMIAEGKAASKLIGHK
IVLKIPATATGFQATSHLSKNIDCSVTGIYHPAQALVAAETGAKYAIAYVNRATRLLGDGLKLVREMAKVLEGSSTEILA
ASVKSPDEATETLLAGAHHLTLPFSVLQTITTHELSEQTFKEFNEKGRGIMY
>Mature_212_residues
MVLYLDSAIVTEARVASKFGWISGVTTNPTLLAKSDLSPEATLKELSEIISGELYYQLTATSFDEMIAEGKAASKLIGHK
IVLKIPATATGFQATSHLSKNIDCSVTGIYHPAQALVAAETGAKYAIAYVNRATRLLGDGLKLVREMAKVLEGSSTEILA
ASVKSPDEATETLLAGAHHLTLPFSVLQTITTHELSEQTFKEFNEKGRGIMY

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 3B subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081788, Length=214, Percent_Identity=32.2429906542056, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1790382, Length=208, Percent_Identity=38.4615384615385, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004731
- InterPro:   IPR022999
- InterPro:   IPR018225 [H]

Pfam domain/function: PF00923 Transaldolase [H]

EC number: =2.2.1.2 [H]

Molecular weight: Translated: 22761; Mature: 22761

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS01054 TRANSALDOLASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLYLDSAIVTEARVASKFGWISGVTTNPTLLAKSDLSPEATLKELSEIISGELYYQLTA
CEEEECHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
TSFDEMIAEGKAASKLIGHKIVLKIPATATGFQATSHLSKNIDCSVTGIYHPAQALVAAE
CCHHHHHHCCHHHHHHHCCEEEEEECCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHC
TGAKYAIAYVNRATRLLGDGLKLVREMAKVLEGSSTEILAASVKSPDEATETLLAGAHHL
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCHHE
TLPFSVLQTITTHELSEQTFKEFNEKGRGIMY
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVLYLDSAIVTEARVASKFGWISGVTTNPTLLAKSDLSPEATLKELSEIISGELYYQLTA
CEEEECHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
TSFDEMIAEGKAASKLIGHKIVLKIPATATGFQATSHLSKNIDCSVTGIYHPAQALVAAE
CCHHHHHHCCHHHHHHHCCEEEEEECCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHC
TGAKYAIAYVNRATRLLGDGLKLVREMAKVLEGSSTEILAASVKSPDEATETLLAGAHHL
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCHHE
TLPFSVLQTITTHELSEQTFKEFNEKGRGIMY
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA