| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474354
Identifier: 113474354
GI number: 113474354
Start: 778406
End: 778600
Strand: Direct
Name: 113474354
Synonym: Tery_0486
Alternate gene names: NA
Gene position: 778406-778600 (Clockwise)
Preceding gene: 113474348
Following gene: 113474355
Centisome position: 10.04
GC content: 38.97
Gene sequence:
>195_bases ATGGAACCAAACTGTGTGATTCGGAAACTTGTATCTAAAGCTCTCTATTTTCGGCGATTAACCCCTGAAATCGAAAATCA AATCAACTCTGAGTTGACACGACTTGGCTATATTTCCGATGTAGACTATGAGGCATTAGAATTATTAATGGAAGAGATGG ATGCAGGACGAATTCATCTCGTCCCTACTATGTAA
Upstream 100 bases:
>100_bases TTAATGACGAATATCACTTTCTCGTATAGTATTGAATCACCTATAAGGTTAAATATGTACCAGAGAATTTAACTATATAG AGTTTTTATTTAGATTAGCC
Downstream 100 bases:
>100_bases GTAATTGGAATTTTTTTTATTTTTACATTTCTTCTCCTTAGCAAAACATTTTAACAGCAAAAATAATCTTTTGCATGGAT ATCAGTTATTAGAAAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MEPNCVIRKLVSKALYFRRLTPEIENQINSELTRLGYISDVDYEALELLMEEMDAGRIHLVPTM
Sequences:
>Translated_64_residues MEPNCVIRKLVSKALYFRRLTPEIENQINSELTRLGYISDVDYEALELLMEEMDAGRIHLVPTM >Mature_64_residues MEPNCVIRKLVSKALYFRRLTPEIENQINSELTRLGYISDVDYEALELLMEEMDAGRIHLVPTM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7470; Mature: 7470
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPNCVIRKLVSKALYFRRLTPEIENQINSELTRLGYISDVDYEALELLMEEMDAGRIHL CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEE VPTM CCCC >Mature Secondary Structure MEPNCVIRKLVSKALYFRRLTPEIENQINSELTRLGYISDVDYEALELLMEEMDAGRIHL CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEE VPTM CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA