| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474314
Identifier: 113474314
GI number: 113474314
Start: 697751
End: 698074
Strand: Direct
Name: 113474314
Synonym: Tery_0443
Alternate gene names: NA
Gene position: 697751-698074 (Clockwise)
Preceding gene: 113474313
Following gene: 113474316
Centisome position: 9.0
GC content: 32.1
Gene sequence:
>324_bases ATGGGTTTTTTTGATTCAGAAGTAGTGCAAAAAGAAGCCAAGCAACTATTTGAGGATTATCAATCCTTAATTATGCTAGG AAGTAATTATGGCAAATTTGACCGAGAAGGTAAGAAAATGTACATTGAGCAAATGGAAGCTATGATGGATAGGTATAAGA TTTTTATGAAACGATTTGAACTGTCGGAAGATTTCATGGCTAAAATGACTATGGAACAACTTAAAACTCAGTTAAATCAA TTCGGAATTACTCCTCAACAAATGTTTCATCAAATGAATGTAACTCTAGAAAGAATGAAATCAGAATTGAATCATCAGTC CTAA
Upstream 100 bases:
>100_bases AATCGTCAAATGTGGTATTGGCTTCCAGTCTGTAACCCAAGTTTATAGCCTGCCGGTCAAAATTTAGTTGATATAATTTT TATTTTAGAAAAGGAAAGTT
Downstream 100 bases:
>100_bases TTTAATTAAGATAAATAACCGCTTATTAATTGCAATTTCAGGTAGTACTCCATAAGTAACTATAAATATAAATTAGTAAA AGTCACTGCGGATATTATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MGFFDSEVVQKEAKQLFEDYQSLIMLGSNYGKFDREGKKMYIEQMEAMMDRYKIFMKRFELSEDFMAKMTMEQLKTQLNQ FGITPQQMFHQMNVTLERMKSELNHQS
Sequences:
>Translated_107_residues MGFFDSEVVQKEAKQLFEDYQSLIMLGSNYGKFDREGKKMYIEQMEAMMDRYKIFMKRFELSEDFMAKMTMEQLKTQLNQ FGITPQQMFHQMNVTLERMKSELNHQS >Mature_106_residues GFFDSEVVQKEAKQLFEDYQSLIMLGSNYGKFDREGKKMYIEQMEAMMDRYKIFMKRFELSEDFMAKMTMEQLKTQLNQF GITPQQMFHQMNVTLERMKSELNHQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12921; Mature: 12790
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 12.1 %Met (Translated Protein) 12.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 11.3 %Met (Mature Protein) 11.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFFDSEVVQKEAKQLFEDYQSLIMLGSNYGKFDREGKKMYIEQMEAMMDRYKIFMKRFE CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC LSEDFMAKMTMEQLKTQLNQFGITPQQMFHQMNVTLERMKSELNHQS CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GFFDSEVVQKEAKQLFEDYQSLIMLGSNYGKFDREGKKMYIEQMEAMMDRYKIFMKRFE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC LSEDFMAKMTMEQLKTQLNQFGITPQQMFHQMNVTLERMKSELNHQS CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA