Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474287

Identifier: 113474287

GI number: 113474287

Start: 645965

End: 646633

Strand: Reverse

Name: 113474287

Synonym: Tery_0412

Alternate gene names: NA

Gene position: 646633-645965 (Counterclockwise)

Preceding gene: 113474289

Following gene: 113474286

Centisome position: 8.34

GC content: 41.11

Gene sequence:

>669_bases
ATGTCATCTATACATATCTTCCATGATCGCACTGATGCCGGAACAAAATTGGCTGAAGTTATTTTTTCCAGCTTTGGCGA
TGAAAATTTGACGAGAAATTGGCAACTCAACCCCATTGTTTATGCTCTACCAAGAGGAGGGTTGCCAGTAGCAGTGCCAG
TAGCTCGTCGGTTAGGTTGTCCATTGAGTGTCGTAGTAGCCAAGAAAATTACTTTACCGTCTAACCCAGAATTAGCACTG
GGCGCTATAACGGCAGATGGTTGTTTAGTTTGGTCAAAGTACAAACCACGAAGTTTAGAAGTTCAATATACTTTGATTCA
AAAAACACAGCAAAGGGCTTTATCTCAATTAGAAAAGCTGAGTGTGGGAAAACCTGGTATTAGTTCCCTAGATAGGTTAG
TGATTTTGATTGATGATGGAATAGCTACAGGAATGACGATGATAGCTGCAATTAAGTCTATTCAGTTACAAAAACCTAAT
ACTGTTTGGATCTGTGTACCAGTTGCTCCTCGACAGTTACTTGAAGAGTTGAGGCAGTTTTGCGATCGCTTAATTGTGTT
GGAAACTCCTTGCCCGTTCGTCAGTGTGAGTCGGTTTTATAGCAAGTTTACTCAAGTGACAACTGAGGCAGCTTTAGCTT
GTTTACAGCAACAGATGGAGTGGTTATAG

Upstream 100 bases:

>100_bases
AGCTAACAAACAGTTATTGGTGTTAGGTTTCACTATAATTATACCTAAGTTAAATTTTTTAGGTGTGTCACTTCTGTACT
AGTAGTTGGAGACCCAAATT

Downstream 100 bases:

>100_bases
CTGAAGTTATTTCAGTTATTAATGCTTCTGCAATTTCTGGGAAAAAGTTTTGAGAAAAGAATGCTATACTTAAGTGATGT
TTTAATTATTAAGTCGCTCA

Product: phosphoribosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSSIHIFHDRTDAGTKLAEVIFSSFGDENLTRNWQLNPIVYALPRGGLPVAVPVARRLGCPLSVVVAKKITLPSNPELAL
GAITADGCLVWSKYKPRSLEVQYTLIQKTQQRALSQLEKLSVGKPGISSLDRLVILIDDGIATGMTMIAAIKSIQLQKPN
TVWICVPVAPRQLLEELRQFCDRLIVLETPCPFVSVSRFYSKFTQVTTEAALACLQQQMEWL

Sequences:

>Translated_222_residues
MSSIHIFHDRTDAGTKLAEVIFSSFGDENLTRNWQLNPIVYALPRGGLPVAVPVARRLGCPLSVVVAKKITLPSNPELAL
GAITADGCLVWSKYKPRSLEVQYTLIQKTQQRALSQLEKLSVGKPGISSLDRLVILIDDGIATGMTMIAAIKSIQLQKPN
TVWICVPVAPRQLLEELRQFCDRLIVLETPCPFVSVSRFYSKFTQVTTEAALACLQQQMEWL
>Mature_221_residues
SSIHIFHDRTDAGTKLAEVIFSSFGDENLTRNWQLNPIVYALPRGGLPVAVPVARRLGCPLSVVVAKKITLPSNPELALG
AITADGCLVWSKYKPRSLEVQYTLIQKTQQRALSQLEKLSVGKPGISSLDRLVILIDDGIATGMTMIAAIKSIQLQKPNT
VWICVPVAPRQLLEELRQFCDRLIVLETPCPFVSVSRFYSKFTQVTTEAALACLQQQMEWL

Specific function: Unknown

COG id: COG1926

COG function: function code R; Predicted phosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the dienelactone hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925
- InterPro:   IPR000836 [H]

Pfam domain/function: PF01738 DLH; PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 24591; Mature: 24460

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIHIFHDRTDAGTKLAEVIFSSFGDENLTRNWQLNPIVYALPRGGLPVAVPVARRLGC
CCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEECCCEEEEECCCCCCEEHHHHHHHCC
PLSVVVAKKITLPSNPELALGAITADGCLVWSKYKPRSLEVQYTLIQKTQQRALSQLEKL
CEEEEEEEEECCCCCCCEEEEEEEECCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHH
SVGKPGISSLDRLVILIDDGIATGMTMIAAIKSIQLQKPNTVWICVPVAPRQLLEELRQF
CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHEECCCCEEEEEEECCHHHHHHHHHHH
CDRLIVLETPCPFVSVSRFYSKFTQVTTEAALACLQQQMEWL
HHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSIHIFHDRTDAGTKLAEVIFSSFGDENLTRNWQLNPIVYALPRGGLPVAVPVARRLGC
CCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEECCCEEEEECCCCCCEEHHHHHHHCC
PLSVVVAKKITLPSNPELALGAITADGCLVWSKYKPRSLEVQYTLIQKTQQRALSQLEKL
CEEEEEEEEECCCCCCCEEEEEEEECCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHH
SVGKPGISSLDRLVILIDDGIATGMTMIAAIKSIQLQKPNTVWICVPVAPRQLLEELRQF
CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHEECCCCEEEEEEECCHHHHHHHHHHH
CDRLIVLETPCPFVSVSRFYSKFTQVTTEAALACLQQQMEWL
HHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]