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The map label for this gene is 113474286

Identifier: 113474286

GI number: 113474286

Start: 644189

End: 644608

Strand: Reverse

Name: 113474286

Synonym: Tery_0410

Alternate gene names: NA

Gene position: 644608-644189 (Counterclockwise)

Preceding gene: 113474287

Following gene: 113474285

Centisome position: 8.32

GC content: 42.14

Gene sequence:

>420_bases
TTGAAAGTCGCGATCGCCACCCTCAACCACCAGTATATGGTAATAGCAGTAGCCTTGAGCTTTGATGGTAAAACTATTGC
TACTGCAAGTTGTGACAAAACCGTCCTCGTCTGGAATAAAGAGACTGAAAAAGCGATCGCCACCCTCAACCACCAGGACA
AGGTAATAGCAGTAGGCTTTAATTGTGATCATTCACTGACCTTACCTGAAAACAAAGCCTTGGAATTTTCCCATATCCTT
ATTGCCTACTTCAATAATTTGTTTGCTGTTATATTTAGTCAAAAACTTACGCACTTCAGGAGCCAGTGCAATAACTCTTC
CTCTGAGAGCCAGAATATTTCCTGGTTTCTTAGAGTCTTGATGCTATCGGGCTTTCCTTCATTCTCCTATCGTCTAAGGG
TGCTGATGTTGACTCTGTAA

Upstream 100 bases:

>100_bases
CAGGACTTACACTCTAAGCAACAGATCTAGTAGAGGTTTTCTGGCATTTTTCCTCTACAGAGAGGGTATGGTCTACGAGT
GTGCCTAAGTCCTGTAATTA

Downstream 100 bases:

>100_bases
TGTGCTGCTGCTTCTTTTGCCGTGATCTATTTTTTTTTCATACTTTTTCAAAGCTTACTAACAATATATTAGGAGTTTTA
AAATGTTTAAAAAGGTTTGA

Product: WD-40 repeat-containing protein

Products: NA

Alternate protein names: Peptidase

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKVAIATLNHQYMVIAVALSFDGKTIATASCDKTVLVWNKETEKAIATLNHQDKVIAVGFNCDHSLTLPENKALEFSHIL
IAYFNNLFAVIFSQKLTHFRSQCNNSSSESQNISWFLRVLMLSGFPSFSYRLRVLMLTL

Sequences:

>Translated_139_residues
MKVAIATLNHQYMVIAVALSFDGKTIATASCDKTVLVWNKETEKAIATLNHQDKVIAVGFNCDHSLTLPENKALEFSHIL
IAYFNNLFAVIFSQKLTHFRSQCNNSSSESQNISWFLRVLMLSGFPSFSYRLRVLMLTL
>Mature_139_residues
MKVAIATLNHQYMVIAVALSFDGKTIATASCDKTVLVWNKETEKAIATLNHQDKVIAVGFNCDHSLTLPENKALEFSHIL
IAYFNNLFAVIFSQKLTHFRSQCNNSSSESQNISWFLRVLMLSGFPSFSYRLRVLMLTL

Specific function: Unknown

COG id: COG2319

COG function: function code R; FOG: WD40 repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15690; Mature: 15690

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS50082 WD_REPEATS_2 ; PS50294 WD_REPEATS_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAIATLNHQYMVIAVALSFDGKTIATASCDKTVLVWNKETEKAIATLNHQDKVIAVGF
CEEEEEECCCCEEEEEEEEECCCCEEEECCCCCEEEEECCCHHHHHHHCCCCCCEEEEEE
NCDHSLTLPENKALEFSHILIAYFNNLFAVIFSQKLTHFRSQCNNSSSESQNISWFLRVL
CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
MLSGFPSFSYRLRVLMLTL
HHHCCCCHHEEEEEEEEEC
>Mature Secondary Structure
MKVAIATLNHQYMVIAVALSFDGKTIATASCDKTVLVWNKETEKAIATLNHQDKVIAVGF
CEEEEEECCCCEEEEEEEEECCCCEEEECCCCCEEEEECCCHHHHHHHCCCCCCEEEEEE
NCDHSLTLPENKALEFSHILIAYFNNLFAVIFSQKLTHFRSQCNNSSSESQNISWFLRVL
CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
MLSGFPSFSYRLRVLMLTL
HHHCCCCHHEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA