Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474236

Identifier: 113474236

GI number: 113474236

Start: 548063

End: 548857

Strand: Direct

Name: 113474236

Synonym: Tery_0355

Alternate gene names: NA

Gene position: 548063-548857 (Clockwise)

Preceding gene: 113474235

Following gene: 113474237

Centisome position: 7.07

GC content: 31.19

Gene sequence:

>795_bases
ATGAACATGAATCTACAAGAACAAAATTGGATAAATTTATTCGGAGATCTTTCTCCAGAAGGAATAGCTTGGTATGGTAT
TTGGACTAGATATTCTCCAAAATTAGAAGTTATAACATCTTTTCAAGGTATCAGAAATTTGTCAGCTAATAATAATAAAA
CAGTAATTACTCATCGTAATAATTATACTTATGCTGATGGTAGTACGAAAGAAATACAATGGCTTCTTGATAAAGAAATT
GCCAATCAACCAGATGGAATAATTCATTCGGGAGCAGAATCTATGAGGGTATTATCTTTCAGTGAAGAAGCCAAAACTTC
GATATGCCCACAATTAAAAATAGAGAATCCTTTCGGTTGTGAATTGTTTTTCCAACATCAAAATTTTCGGACTAGCGTTG
TCGTTATTTATGGAGAAAATGGCGAGCTAGCAAGATTTACACAAATTCGCGAACATCTAAATAGTTATCCAGACCAAAAA
CCAGGAGCAAATTTAAATAATATATCAGGAAATTGGGTTAGAAAAAAACAATCTATGACTCCAGATTTACAAGTTTTTCA
AGAACCAGAGATGAGAGAAATTGAGTTAAATCTAACTACAGGTAAAAATCAAACATTTTTCCTACCTGATGCTATAGTTA
TCAATGTTCCTCAACAGCTAAAAATAGGAGAAGAATTTGAAATTTTAGTAGGTAAGATGGTGATAGAAAATAAGTATAAA
AGGATGATTGTTAAATACGATAAAAATGGCAAATTTATCCAGTTAATTTCTGAAGTTTTTGACCGGAAAGATTAA

Upstream 100 bases:

>100_bases
TAGGGATAGAAGTTAGTAATGGTTCTAATTTTTGCGAGTGGTATATATGGGGATAATAATCAGGTAAAATAGTACAAAAT
CAAGATAAATTTGAGAATAC

Downstream 100 bases:

>100_bases
ACTGGCTGGAAAAGTAGTAATTTTGGTTATTAGTTATGGGTACTTTTGTAAACAATGCATTAAAAATAGCATCAAGCCTT
TATATAGTCTAGGTTTGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNMNLQEQNWINLFGDLSPEGIAWYGIWTRYSPKLEVITSFQGIRNLSANNNKTVITHRNNYTYADGSTKEIQWLLDKEI
ANQPDGIIHSGAESMRVLSFSEEAKTSICPQLKIENPFGCELFFQHQNFRTSVVVIYGENGELARFTQIREHLNSYPDQK
PGANLNNISGNWVRKKQSMTPDLQVFQEPEMREIELNLTTGKNQTFFLPDAIVINVPQQLKIGEEFEILVGKMVIENKYK
RMIVKYDKNGKFIQLISEVFDRKD

Sequences:

>Translated_264_residues
MNMNLQEQNWINLFGDLSPEGIAWYGIWTRYSPKLEVITSFQGIRNLSANNNKTVITHRNNYTYADGSTKEIQWLLDKEI
ANQPDGIIHSGAESMRVLSFSEEAKTSICPQLKIENPFGCELFFQHQNFRTSVVVIYGENGELARFTQIREHLNSYPDQK
PGANLNNISGNWVRKKQSMTPDLQVFQEPEMREIELNLTTGKNQTFFLPDAIVINVPQQLKIGEEFEILVGKMVIENKYK
RMIVKYDKNGKFIQLISEVFDRKD
>Mature_264_residues
MNMNLQEQNWINLFGDLSPEGIAWYGIWTRYSPKLEVITSFQGIRNLSANNNKTVITHRNNYTYADGSTKEIQWLLDKEI
ANQPDGIIHSGAESMRVLSFSEEAKTSICPQLKIENPFGCELFFQHQNFRTSVVVIYGENGELARFTQIREHLNSYPDQK
PGANLNNISGNWVRKKQSMTPDLQVFQEPEMREIELNLTTGKNQTFFLPDAIVINVPQQLKIGEEFEILVGKMVIENKYK
RMIVKYDKNGKFIQLISEVFDRKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30530; Mature: 30530

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMNLQEQNWINLFGDLSPEGIAWYGIWTRYSPKLEVITSFQGIRNLSANNNKTVITHRN
CCCCCCCCCCEEEECCCCCCCEEEEEEEEECCCCCEEEEHHHHHHCCCCCCCEEEEEECC
NYTYADGSTKEIQWLLDKEIANQPDGIIHSGAESMRVLSFSEEAKTSICPQLKIENPFGC
CEEECCCCHHHHHEEECHHHCCCCCCCEECCCCCEEEEEECHHHHHHCCCCEEECCCCCE
ELFFQHQNFRTSVVVIYGENGELARFTQIREHLNSYPDQKPGANLNNISGNWVRKKQSMT
EEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCC
PDLQVFQEPEMREIELNLTTGKNQTFFLPDAIVINVPQQLKIGEEFEILVGKMVIENKYK
CCHHHHCCCCCEEEEEEEECCCCEEEECCCEEEEECCHHCCCCCHHHHHHHHHHHHCCCE
RMIVKYDKNGKFIQLISEVFDRKD
EEEEEECCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MNMNLQEQNWINLFGDLSPEGIAWYGIWTRYSPKLEVITSFQGIRNLSANNNKTVITHRN
CCCCCCCCCCEEEECCCCCCCEEEEEEEEECCCCCEEEEHHHHHHCCCCCCCEEEEEECC
NYTYADGSTKEIQWLLDKEIANQPDGIIHSGAESMRVLSFSEEAKTSICPQLKIENPFGC
CEEECCCCHHHHHEEECHHHCCCCCCCEECCCCCEEEEEECHHHHHHCCCCEEECCCCCE
ELFFQHQNFRTSVVVIYGENGELARFTQIREHLNSYPDQKPGANLNNISGNWVRKKQSMT
EEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCC
PDLQVFQEPEMREIELNLTTGKNQTFFLPDAIVINVPQQLKIGEEFEILVGKMVIENKYK
CCHHHHCCCCCEEEEEEEECCCCEEEECCCEEEEECCHHCCCCCHHHHHHHHHHHHCCCE
RMIVKYDKNGKFIQLISEVFDRKD
EEEEEECCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA