| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474235
Identifier: 113474235
GI number: 113474235
Start: 546691
End: 547593
Strand: Direct
Name: 113474235
Synonym: Tery_0353
Alternate gene names: NA
Gene position: 546691-547593 (Clockwise)
Preceding gene: 113474233
Following gene: 113474236
Centisome position: 7.05
GC content: 38.65
Gene sequence:
>903_bases ATGAAGCAACAACAATGCTATAAATGGTTTAGTAGCTTAAAGCGGACTATCCAAGAGATGATGTGGGAGTCAGTTGCGAC TACAGTCGAACGTCAGCTACCAGAATTGATAGAACAAGCAAAAGATCGAGAAGCACCCCAAGGAACAGTTACCTTAGACC CTGAATTGAAAATACCAGCCTACCAAACTGCGGTAGATATTCATTGTATGCCTGGGGGATATAATGGTGAATACACTCAA GATGATATATCTGCTGGTGCTATCTATAATTTAGGTGTTTATATATATAGTCTGGCAAACCGTGACTCCATTCGCGATGA CAGAGTTCAGACAGTTATCCACAAATTCTTGAAGCAGGAATACCCAAATTTTCAGCCTGGAAAAATTCTAGATATGGGTT GTACGATAGGTGATAACACTTTGCCTTATGTAGATGCTTACCCAAATGCTGAAGTTTATGGTATCGATCTAGCTCGGGCT ATATTACGCTATGGTCATGCGCGAGCCGAGTTTTTAGAAAAACGGGTGCATTTTAGTCAACAGAATGCCGAGAAAACTAA CTTTCAGGATGAGTCATTTTATTTGGTGGTAAGTCATATTTTACTACATGAAATACCTGTACCAGCAATTCAGAATGTTT TCCGCGAAAGTTATCGTTTGTTAGCTCCAGGTGGAATAATGATACATCAAGATGCGCGTTTGTATTGTCATCTAGATGTA TATACTGCGTTCCTCTACGATGAAGAAACAACTAATAATAATGAACCCTTCTGGAGTTCGATGCGAGATTTAGATTTAGT AGCTGTAGCAGAAGAAGCAGGTTTTTCCAGAGATAGTCTCATTGAAACGCTACTGGTAAAAAATAATGGAATGCAGTTAT TTATTATTGTTGGTACTAAATAA
Upstream 100 bases:
>100_bases GCTCCCTGAATTGAAGGTGGTATAGGAAGAAACTGTCAAACCACAATTTGAAGTAGAAAACCAACGTCTTCCTAAAGACC GTTATGAAATTCGGCGGGGT
Downstream 100 bases:
>100_bases AAAAAAAAGACAGAAAAAAAATGATTCCTAAACAAGCAAAAGGTAAACGACCAGTTTATTTAGATAATACAGATAACGAT CAATTACTGGCAATAATAAT
Product: type 12 methyltransferase
Products: NA
Alternate protein names: Methyltransferase Domain Family; Methyltransferase; UbiE/COQ5 Family Methlytransferase; Methyltransferase UbiE/COQ5 Family
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MKQQQCYKWFSSLKRTIQEMMWESVATTVERQLPELIEQAKDREAPQGTVTLDPELKIPAYQTAVDIHCMPGGYNGEYTQ DDISAGAIYNLGVYIYSLANRDSIRDDRVQTVIHKFLKQEYPNFQPGKILDMGCTIGDNTLPYVDAYPNAEVYGIDLARA ILRYGHARAEFLEKRVHFSQQNAEKTNFQDESFYLVVSHILLHEIPVPAIQNVFRESYRLLAPGGIMIHQDARLYCHLDV YTAFLYDEETTNNNEPFWSSMRDLDLVAVAEEAGFSRDSLIETLLVKNNGMQLFIIVGTK
Sequences:
>Translated_300_residues MKQQQCYKWFSSLKRTIQEMMWESVATTVERQLPELIEQAKDREAPQGTVTLDPELKIPAYQTAVDIHCMPGGYNGEYTQ DDISAGAIYNLGVYIYSLANRDSIRDDRVQTVIHKFLKQEYPNFQPGKILDMGCTIGDNTLPYVDAYPNAEVYGIDLARA ILRYGHARAEFLEKRVHFSQQNAEKTNFQDESFYLVVSHILLHEIPVPAIQNVFRESYRLLAPGGIMIHQDARLYCHLDV YTAFLYDEETTNNNEPFWSSMRDLDLVAVAEEAGFSRDSLIETLLVKNNGMQLFIIVGTK >Mature_300_residues MKQQQCYKWFSSLKRTIQEMMWESVATTVERQLPELIEQAKDREAPQGTVTLDPELKIPAYQTAVDIHCMPGGYNGEYTQ DDISAGAIYNLGVYIYSLANRDSIRDDRVQTVIHKFLKQEYPNFQPGKILDMGCTIGDNTLPYVDAYPNAEVYGIDLARA ILRYGHARAEFLEKRVHFSQQNAEKTNFQDESFYLVVSHILLHEIPVPAIQNVFRESYRLLAPGGIMIHQDARLYCHLDV YTAFLYDEETTNNNEPFWSSMRDLDLVAVAEEAGFSRDSLIETLLVKNNGMQLFIIVGTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34379; Mature: 34379
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQQQCYKWFSSLKRTIQEMMWESVATTVERQLPELIEQAKDREAPQGTVTLDPELKIPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC YQTAVDIHCMPGGYNGEYTQDDISAGAIYNLGVYIYSLANRDSIRDDRVQTVIHKFLKQE CCEEEEEEECCCCCCCCCCCCCCCCCHHEEHHHHEEEECCCCCCCHHHHHHHHHHHHHHH YPNFQPGKILDMGCTIGDNTLPYVDAYPNAEVYGIDLARAILRYGHARAEFLEKRVHFSQ CCCCCCCCEEEECCEECCCCCCCEECCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHH QNAEKTNFQDESFYLVVSHILLHEIPVPAIQNVFRESYRLLAPGGIMIHQDARLYCHLDV CCCHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCEEEECCCEEEEEEEE YTAFLYDEETTNNNEPFWSSMRDLDLVAVAEEAGFSRDSLIETLLVKNNGMQLFIIVGTK EEEEEECCCCCCCCCCHHHHHHCCCEEEEHHHCCCCHHHHHHHHHEECCCCEEEEEEECC >Mature Secondary Structure MKQQQCYKWFSSLKRTIQEMMWESVATTVERQLPELIEQAKDREAPQGTVTLDPELKIPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC YQTAVDIHCMPGGYNGEYTQDDISAGAIYNLGVYIYSLANRDSIRDDRVQTVIHKFLKQE CCEEEEEEECCCCCCCCCCCCCCCCCHHEEHHHHEEEECCCCCCCHHHHHHHHHHHHHHH YPNFQPGKILDMGCTIGDNTLPYVDAYPNAEVYGIDLARAILRYGHARAEFLEKRVHFSQ CCCCCCCCEEEECCEECCCCCCCEECCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHH QNAEKTNFQDESFYLVVSHILLHEIPVPAIQNVFRESYRLLAPGGIMIHQDARLYCHLDV CCCHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCEEEECCCEEEEEEEE YTAFLYDEETTNNNEPFWSSMRDLDLVAVAEEAGFSRDSLIETLLVKNNGMQLFIIVGTK EEEEEECCCCCCCCCCHHHHHHCCCEEEEHHHCCCCHHHHHHHHHEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA