Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474130

Identifier: 113474130

GI number: 113474130

Start: 358803

End: 359048

Strand: Direct

Name: 113474130

Synonym: Tery_0230

Alternate gene names: NA

Gene position: 358803-359048 (Clockwise)

Preceding gene: 113474129

Following gene: 113474132

Centisome position: 4.63

GC content: 23.58

Gene sequence:

>246_bases
ATGAAATTTAATGTAATAAATCAGAAGAATTTACCATTTAAAACTGTATTAATAGATAGTTGTTATGCAACACAAAGATT
AATAGCATTAATAGATAATATGCGAAAAATTTATTATTGCTCTGAAAAATTAATCCAGAGCATAGATGATACTTGTGGTG
CAGAAAAATTTGCTACATTAAGTTGGAATGAATCAGAAAGAAAATCAGGTAAAATAATAAAAATTAAAGGAATTATTTTG
AGATAA

Upstream 100 bases:

>100_bases
TATATATTTGAACCCCAAAAATGAACAATTTTTAGTATTAAATTACCGCATATATAATCCAGATAGTAACAAAAAAACTA
AAATACACCATGTTAAAGAG

Downstream 100 bases:

>100_bases
AAAAATCAATCTATTCTGGGCTACTATTTCTGCCAAGAGGACAGAATACATTGTCACTAATGACTTAAGTCAATCTTCTA
CAGATGATGTAGAATTCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MKFNVINQKNLPFKTVLIDSCYATQRLIALIDNMRKIYYCSEKLIQSIDDTCGAEKFATLSWNESERKSGKIIKIKGIIL
R

Sequences:

>Translated_81_residues
MKFNVINQKNLPFKTVLIDSCYATQRLIALIDNMRKIYYCSEKLIQSIDDTCGAEKFATLSWNESERKSGKIIKIKGIIL
R
>Mature_81_residues
MKFNVINQKNLPFKTVLIDSCYATQRLIALIDNMRKIYYCSEKLIQSIDDTCGAEKFATLSWNESERKSGKIIKIKGIIL
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9373; Mature: 9373

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFNVINQKNLPFKTVLIDSCYATQRLIALIDNMRKIYYCSEKLIQSIDDTCGAEKFATL
CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
SWNESERKSGKIIKIKGIILR
CCCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MKFNVINQKNLPFKTVLIDSCYATQRLIALIDNMRKIYYCSEKLIQSIDDTCGAEKFATL
CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
SWNESERKSGKIIKIKGIILR
CCCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA