Click here to switch to the map view.

The map label for this gene is 113474103

Identifier: 113474103

GI number: 113474103

Start: 306604

End: 307140

Strand: Direct

Name: 113474103

Synonym: Tery_0202

Alternate gene names: NA

Gene position: 306604-307140 (Clockwise)

Preceding gene: 113474102

Following gene: 113474104

Centisome position: 3.96

GC content: 37.43

Gene sequence:

>537_bases
ATGAGCCTATCCAAAGATGTGACAAAGTCTATTTCTGAGCTTGATATTCCCTTAGACCGAGATGTGTTTTTACGAACTTT
AATTCGAAAACTATCAGGAACATTAGAGAAAATTGTCGGTTTGGAAGAAGCATCAGGTTTTATTAGTATTGTTGGTCAAA
CTATAGGAGATGAACTTAACTCCGATTACAAAGAAGCACTGAAAGTATCTCAGTTGTCTAGACAAGAAGTGGCTCAAGTG
TTAGTTGATTTAAAAAGAAGAATTAAGGGAGAGTTTTACATAATTGAGGAAAATGATGAAAAGATTGTTTTTGGGAACCA
CAATTGTCCATTTTCTGAACAGGTAATTGGTCGTCCCTCTGTATGTATGATGACCTCCAATGTTTTTGGCTCAATTGTGG
CTGATAACTTGGGGTATGGAAAAGTTGAACTGCAACAAACAATTGCAGAGGGTGCTTCTGGCTGTCGGGTAGTGGTTTAT
TTAGAACTAACAGAAGATGCAGAAGAAGCTGAGGGGAGAGAGTATTTCAAATCCTAA

Upstream 100 bases:

>100_bases
GCAATGTATTATGCTACGCTTACTTTGGCGTTTTCTATACCTATCTACTATTACGGGAGCATGACAACCAAAAATCTAAA
ATATTAATTAAAAAAAAATT

Downstream 100 bases:

>100_bases
TGTAATTTTAAGGTGTTAAAAATGACTCCGGAACAGTTTATCGAATTAGCGAGGGTCTTGCCTGAACCCTCTTTATTCCT
TACTCAAAAAGGGGAAATAT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Sigma-54 Factor Interaction Domain-Containing Protein; Sigma-54 Dependent Transcriptional Regulator

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSLSKDVTKSISELDIPLDRDVFLRTLIRKLSGTLEKIVGLEEASGFISIVGQTIGDELNSDYKEALKVSQLSRQEVAQV
LVDLKRRIKGEFYIIEENDEKIVFGNHNCPFSEQVIGRPSVCMMTSNVFGSIVADNLGYGKVELQQTIAEGASGCRVVVY
LELTEDAEEAEGREYFKS

Sequences:

>Translated_178_residues
MSLSKDVTKSISELDIPLDRDVFLRTLIRKLSGTLEKIVGLEEASGFISIVGQTIGDELNSDYKEALKVSQLSRQEVAQV
LVDLKRRIKGEFYIIEENDEKIVFGNHNCPFSEQVIGRPSVCMMTSNVFGSIVADNLGYGKVELQQTIAEGASGCRVVVY
LELTEDAEEAEGREYFKS
>Mature_177_residues
SLSKDVTKSISELDIPLDRDVFLRTLIRKLSGTLEKIVGLEEASGFISIVGQTIGDELNSDYKEALKVSQLSRQEVAQVL
VDLKRRIKGEFYIIEENDEKIVFGNHNCPFSEQVIGRPSVCMMTSNVFGSIVADNLGYGKVELQQTIAEGASGCRVVVYL
ELTEDAEEAEGREYFKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19788; Mature: 19657

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSKDVTKSISELDIPLDRDVFLRTLIRKLSGTLEKIVGLEEASGFISIVGQTIGDELN
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
SDYKEALKVSQLSRQEVAQVLVDLKRRIKGEFYIIEENDEKIVFGNHNCPFSEQVIGRPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCHHHCCCCC
VCMMTSNVFGSIVADNLGYGKVELQQTIAEGASGCRVVVYLELTEDAEEAEGREYFKS
CEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure 
SLSKDVTKSISELDIPLDRDVFLRTLIRKLSGTLEKIVGLEEASGFISIVGQTIGDELN
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
SDYKEALKVSQLSRQEVAQVLVDLKRRIKGEFYIIEENDEKIVFGNHNCPFSEQVIGRPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCHHHCCCCC
VCMMTSNVFGSIVADNLGYGKVELQQTIAEGASGCRVVVYLELTEDAEEAEGREYFKS
CEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA