Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is dps [C]

Identifier: 110835494

GI number: 110835494

Start: 2981572

End: 2982072

Strand: Reverse

Name: dps [C]

Synonym: ABO_2633

Alternate gene names: 110835494

Gene position: 2982072-2981572 (Counterclockwise)

Preceding gene: 110835499

Following gene: 110835493

Centisome position: 95.57

GC content: 54.69

Gene sequence:

>501_bases
ATGGGACCCCCTTGGCGCTGCAGGCAAGGACAAAACTGGAAAAGGAGACTCGCCATGATTGAACATAACAAGCAGGTCGC
GGAAGAACTAAGCAAACTACTGGCCGAGAGCTACACGCTTTATCTCAAAACGCACAAGTACCACTGGAATGTGACTGGCC
CTATGTTTCATAGCCTGCACCTGTTGTTTGAACAGCAATACATTGAGCTGGCGGAAGCGGTGGACACCATTGCTGAACGT
ATCCGTGCGTTGGGCTGGAAAGCGCCAGGCAGCTACACCGAGTTTGCTAAGTTGTCCACGGTGCAGGATGCCACCGGCGA
TCCGGATGCATCGGATATGATCAAAGAGCTGGCAGAGGATCACCGTACTGTGGCGGAGCGGGCCAACCGGGTATTGAAGC
TGGCCAGCGAACATGAGGATGAAGGTTCTGGTGCGGTCGCCAGTAACCGGATCGAGATTCACGAGAAATCCGCGTGGATG
CTCTCGGCGCATCTGGGTTGA

Upstream 100 bases:

>100_bases
ATCTTCTAATCATGTGGCCAGTGAAGAGGCTGGCAGCCAAGCAATCCTGCTATTGAAATGCATTTTGCTGGCCCAATGGT
ATTAAGCAGCCCAGCAAACA

Downstream 100 bases:

>100_bases
TCTTCCTATAGCAATAGGCAATCGCCTGGATAGGATTAATCGTCTTTATTGATTTTTCTAGGGTGGCTATTCTCGATCTT
GTGCTTGAGAAAGCCGCCCT

Product: DNA-binding stress protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MGPPWRCRQGQNWKRRLAMIEHNKQVAEELSKLLAESYTLYLKTHKYHWNVTGPMFHSLHLLFEQQYIELAEAVDTIAER
IRALGWKAPGSYTEFAKLSTVQDATGDPDASDMIKELAEDHRTVAERANRVLKLASEHEDEGSGAVASNRIEIHEKSAWM
LSAHLG

Sequences:

>Translated_166_residues
MGPPWRCRQGQNWKRRLAMIEHNKQVAEELSKLLAESYTLYLKTHKYHWNVTGPMFHSLHLLFEQQYIELAEAVDTIAER
IRALGWKAPGSYTEFAKLSTVQDATGDPDASDMIKELAEDHRTVAERANRVLKLASEHEDEGSGAVASNRIEIHEKSAWM
LSAHLG
>Mature_165_residues
GPPWRCRQGQNWKRRLAMIEHNKQVAEELSKLLAESYTLYLKTHKYHWNVTGPMFHSLHLLFEQQYIELAEAVDTIAERI
RALGWKAPGSYTEFAKLSTVQDATGDPDASDMIKELAEDHRTVAERANRVLKLASEHEDEGSGAVASNRIEIHEKSAWML
SAHLG

Specific function: Unspecifically Binds And Protects DNA From Oxidative Damage Mediated By Hydrogen Peroxide. Iron-Storage Protein. [C]

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

None

Paralogues:

None

Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 18910; Mature: 18778

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS00818 DPS_1 ; PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPPWRCRQGQNWKRRLAMIEHNKQVAEELSKLLAESYTLYLKTHKYHWNVTGPMFHSLH
CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHH
LLFEQQYIELAEAVDTIAERIRALGWKAPGSYTEFAKLSTVQDATGDPDASDMIKELAED
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
HRTVAERANRVLKLASEHEDEGSGAVASNRIEIHEKSAWMLSAHLG
HHHHHHHHHHHHHHHHHCCCCCCCCEECCEEEEECCCCEEEEECCC
>Mature Secondary Structure 
GPPWRCRQGQNWKRRLAMIEHNKQVAEELSKLLAESYTLYLKTHKYHWNVTGPMFHSLH
CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHH
LLFEQQYIELAEAVDTIAERIRALGWKAPGSYTEFAKLSTVQDATGDPDASDMIKELAED
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
HRTVAERANRVLKLASEHEDEGSGAVASNRIEIHEKSAWMLSAHLG
HHHHHHHHHHHHHHHHHCCCCCCCCEECCEEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]