| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is grxC [C]
Identifier: 110835493
GI number: 110835493
Start: 2980695
End: 2981432
Strand: Reverse
Name: grxC [C]
Synonym: ABO_2632
Alternate gene names: 110835493
Gene position: 2981432-2980695 (Counterclockwise)
Preceding gene: 110835494
Following gene: 110835492
Centisome position: 95.55
GC content: 53.52
Gene sequence:
>738_bases ATGTTTGAGAATCGCGAAGGTCAGCCTGTTCCAGCGGTAACGTTTCGAACCCGGGAAGGCAACGAATGGAAAGATGTCAC CACCGATGACGTGTTCAAGGGAAAAACTGTGGTGGTGTTTGCCTTGCCTGGAGCGTTTACCCCCACCTGTTCTTCGACCC ATCTGCCACGCTATAACGAGCTGGCGCCTGTACTCAAGGCTAACGGTGTAGATGATATTGTCTGCCTGTCGGTGAACGAT GGTTTTGTTATGAATGCTTGGGCTGGTGATCAGGCTGCTGGCAATATTCACTTTATCCCAGATGGTAACGGTGAGTTCAC CGACAAGATGGGTATGCTCGTGAATAAACAGGACTTGGGCTTTGGCCCGCGAAGCTGGCGCTACTCCATGCTGGTGAAAG ACGGCGTCATCGATCGCATGTTCATTGAGCCGGATAAGCCCGGGGATCCGTTTGAAGTGTCTGATGCGGATACCATGCTA AAGTATATTAACGGCGAAGCGGTTTTGCCTAAGCGAGTGACCGTGTTCACCAAGCCGGGCTGCCCGCACTGCACGCGTGC GAAACAGGCGCTGACCGATTACGGTTATGCCTTTGAAGAAATTGAGTTGGGTAGCCGAGGGTTGAGTTACAGCTCTTTGG CTGCGGTCACCGGCGCGGGGACCACGCCACAGATATACATTGAAGGTGAGCGTATAGGCGGCGCTGATGAGTTGGAGGCC TGGTTGCAACAGGGCTAA
Upstream 100 bases:
>100_bases TCGTCTTTATTGATTTTTCTAGGGTGGCTATTCTCGATCTTGTGCTTGAGAAAGCCGCCCTTTCAGTAAGCGGCTTCGAT TCTATCCAGGGAGTCAATAT
Downstream 100 bases:
>100_bases CTCGCAACGCGTGAATGCGAACTTTCTTCCTTCTTTGGGGCCCGGCGGGGCCCTTTTTTGTGCCGCTGTGCCGTTCACGT CGCACACTGCATGCTATTCG
Product: peroxiredoxin family protein/glutaredoxin
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MFENREGQPVPAVTFRTREGNEWKDVTTDDVFKGKTVVVFALPGAFTPTCSSTHLPRYNELAPVLKANGVDDIVCLSVND GFVMNAWAGDQAAGNIHFIPDGNGEFTDKMGMLVNKQDLGFGPRSWRYSMLVKDGVIDRMFIEPDKPGDPFEVSDADTML KYINGEAVLPKRVTVFTKPGCPHCTRAKQALTDYGYAFEEIELGSRGLSYSSLAAVTGAGTTPQIYIEGERIGGADELEA WLQQG
Sequences:
>Translated_245_residues MFENREGQPVPAVTFRTREGNEWKDVTTDDVFKGKTVVVFALPGAFTPTCSSTHLPRYNELAPVLKANGVDDIVCLSVND GFVMNAWAGDQAAGNIHFIPDGNGEFTDKMGMLVNKQDLGFGPRSWRYSMLVKDGVIDRMFIEPDKPGDPFEVSDADTML KYINGEAVLPKRVTVFTKPGCPHCTRAKQALTDYGYAFEEIELGSRGLSYSSLAAVTGAGTTPQIYIEGERIGGADELEA WLQQG >Mature_245_residues MFENREGQPVPAVTFRTREGNEWKDVTTDDVFKGKTVVVFALPGAFTPTCSSTHLPRYNELAPVLKANGVDDIVCLSVND GFVMNAWAGDQAAGNIHFIPDGNGEFTDKMGMLVNKQDLGFGPRSWRYSMLVKDGVIDRMFIEPDKPGDPFEVSDADTML KYINGEAVLPKRVTVFTKPGCPHCTRAKQALTDYGYAFEEIELGSRGLSYSSLAAVTGAGTTPQIYIEGERIGGADELEA WLQQG
Specific function: The Disulfide Bond Functions As An Electron Carrier In The Glutathione-Dependent Synthesis Of Deoxyribonucleotides By The Enzyme Ribonucleotide Reductase. In Addition, It Is Also Involved In Reducing Some Disulfides In A Coupled System With Glutathione R
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=147, Percent_Identity=40.8163265306122, Blast_Score=107, Evalue=8e-24, Organism=Saccharomyces cerevisiae, GI6323138, Length=146, Percent_Identity=28.7671232876712, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI78706776, Length=146, Percent_Identity=42.4657534246575, Blast_Score=110, Evalue=7e-25, Organism=Drosophila melanogaster, GI78709078, Length=146, Percent_Identity=42.4657534246575, Blast_Score=110, Evalue=7e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR002109 - InterPro: IPR011906 - InterPro: IPR014025 - InterPro: IPR013740 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin; PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 26797; Mature: 26797
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFENREGQPVPAVTFRTREGNEWKDVTTDDVFKGKTVVVFALPGAFTPTCSSTHLPRYNE CCCCCCCCCCCEEEEEECCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCCCCHHH LAPVLKANGVDDIVCLSVNDGFVMNAWAGDQAAGNIHFIPDGNGEFTDKMGMLVNKQDLG HCHHHHCCCCCCEEEEEECCCEEEEECCCCCCCCEEEEEECCCCCCCHHHCEEEEHHHCC FGPRSWRYSMLVKDGVIDRMFIEPDKPGDPFEVSDADTMLKYINGEAVLPKRVTVFTKPG CCCCCEEEEEEEECCCEEEEEECCCCCCCCEEECCHHHHHHHHCCCEECCCEEEEEECCC CPHCTRAKQALTDYGYAFEEIELGSRGLSYSSLAAVTGAGTTPQIYIEGERIGGADELEA CCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHEEEECCCCCCEEEEECCCCCCHHHHHH WLQQG HHHCC >Mature Secondary Structure MFENREGQPVPAVTFRTREGNEWKDVTTDDVFKGKTVVVFALPGAFTPTCSSTHLPRYNE CCCCCCCCCCCEEEEEECCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCCCCHHH LAPVLKANGVDDIVCLSVNDGFVMNAWAGDQAAGNIHFIPDGNGEFTDKMGMLVNKQDLG HCHHHHCCCCCCEEEEEECCCEEEEECCCCCCCCEEEEEECCCCCCCHHHCEEEEHHHCC FGPRSWRYSMLVKDGVIDRMFIEPDKPGDPFEVSDADTMLKYINGEAVLPKRVTVFTKPG CCCCCEEEEEEEECCCEEEEEECCCCCCCCEEECCHHHHHHHHCCCEECCCEEEEEECCC CPHCTRAKQALTDYGYAFEEIELGSRGLSYSSLAAVTGAGTTPQIYIEGERIGGADELEA CCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHEEEECCCCCCEEEEECCCCCCHHHHHH WLQQG HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]