| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835410
Identifier: 110835410
GI number: 110835410
Start: 2890344
End: 2890931
Strand: Reverse
Name: 110835410
Synonym: ABO_2549
Alternate gene names: NA
Gene position: 2890931-2890344 (Counterclockwise)
Preceding gene: 110835411
Following gene: 110835409
Centisome position: 92.65
GC content: 59.35
Gene sequence:
>588_bases TTGATGCAGGATATGTCGATGTTGTCTCCAGCGTTGGACACTCTGCCTCGGGTATTTACCCTCTCTGATCTTAAGCAGCT GCAGCCAGAGGAGTCTGAGCGGGCACTGGATTGTGTTCTGCGCTGGCTGGAATCTGGCGTGGTCAAGCAGGTGGCTCCGC CGCGTCCGGTATTTTACAGGGTGGTGTTGGGCGACCCGTTGAGCGATGAGGATCGTTGTCGGGCTTTGCAGCGGGCCTTC CCGTCGCTGGTCATGGTAGCAGGGTCGGCGTTGTGGCGGCAGGGGCTGAGTCGTCAGCAGGATAGTGTGCTGGAATGCTG TGTGGCGGAAGTTGAGCTGAGCTGTCATTTGCCGGATGTTCGGCTGCATTGGCGGCCGCCTGCTTGGTGGTCAGTGATTC GTCTCGCGGGCGGAATTGCCGGTGACTATCACGGCGTGCCCATGCTCAATGCAGAATTGGCATTGGCCGATGCGTCCACG TTCGCTGGTGTGTGGATGCCAGATCGCGAGGCTGTGGATTGGAGTCGTTTGTCTACCGCGCGGCTCAGTGAGGCCAGTGA CTATCTGCGTAAGTTGCGGCCTCGTTGA
Upstream 100 bases:
>100_bases AAGCCCGTCAGATGACGGTGATCTGTCATCTGCTGGCGTGGGCCATGGCTTTGCGTTCCTGCCTCGGACTACGATTGCCG TTGGCGGACAGGGTGAGGCG
Downstream 100 bases:
>100_bases GCTCGTCGGCCTTGTTATCTTGACGGAAGCGACCGCCTGCTATTAAATGAGAACCATTATCATAAATAATGGTTTTTCTT ATGTTGGTTGCCGTTCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MMQDMSMLSPALDTLPRVFTLSDLKQLQPEESERALDCVLRWLESGVVKQVAPPRPVFYRVVLGDPLSDEDRCRALQRAF PSLVMVAGSALWRQGLSRQQDSVLECCVAEVELSCHLPDVRLHWRPPAWWSVIRLAGGIAGDYHGVPMLNAELALADAST FAGVWMPDREAVDWSRLSTARLSEASDYLRKLRPR
Sequences:
>Translated_195_residues MMQDMSMLSPALDTLPRVFTLSDLKQLQPEESERALDCVLRWLESGVVKQVAPPRPVFYRVVLGDPLSDEDRCRALQRAF PSLVMVAGSALWRQGLSRQQDSVLECCVAEVELSCHLPDVRLHWRPPAWWSVIRLAGGIAGDYHGVPMLNAELALADAST FAGVWMPDREAVDWSRLSTARLSEASDYLRKLRPR >Mature_195_residues MMQDMSMLSPALDTLPRVFTLSDLKQLQPEESERALDCVLRWLESGVVKQVAPPRPVFYRVVLGDPLSDEDRCRALQRAF PSLVMVAGSALWRQGLSRQQDSVLECCVAEVELSCHLPDVRLHWRPPAWWSVIRLAGGIAGDYHGVPMLNAELALADAST FAGVWMPDREAVDWSRLSTARLSEASDYLRKLRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21943; Mature: 21943
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQDMSMLSPALDTLPRVFTLSDLKQLQPEESERALDCVLRWLESGVVKQVAPPRPVFYR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE VVLGDPLSDEDRCRALQRAFPSLVMVAGSALWRQGLSRQQDSVLECCVAEVELSCHLPDV EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC RLHWRPPAWWSVIRLAGGIAGDYHGVPMLNAELALADASTFAGVWMPDREAVDWSRLSTA EEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHEECCCHHHCCCCCCCCCCCCHHHHHHH RLSEASDYLRKLRPR HHHHHHHHHHHHCCC >Mature Secondary Structure MMQDMSMLSPALDTLPRVFTLSDLKQLQPEESERALDCVLRWLESGVVKQVAPPRPVFYR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE VVLGDPLSDEDRCRALQRAFPSLVMVAGSALWRQGLSRQQDSVLECCVAEVELSCHLPDV EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC RLHWRPPAWWSVIRLAGGIAGDYHGVPMLNAELALADASTFAGVWMPDREAVDWSRLSTA EEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHEECCCHHHCCCCCCCCCCCCHHHHHHH RLSEASDYLRKLRPR HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA