| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835411
Identifier: 110835411
GI number: 110835411
Start: 2890928
End: 2891539
Strand: Reverse
Name: 110835411
Synonym: ABO_2550
Alternate gene names: NA
Gene position: 2891539-2890928 (Counterclockwise)
Preceding gene: 110835413
Following gene: 110835410
Centisome position: 92.67
GC content: 61.27
Gene sequence:
>612_bases ATGAGGACACAGCAAGTGGCAGGGAAGCCGCGTCAGCAAGAGCTGGAGCTGGAGGCGGTGAGAACGCGATTGCAGGCTCT GCAGGAATATTTAGCCGTCTACCGGGCAAGCTTTGCTTCCTCGGGTAGCGCGGATAGCTATGCTCGGGTGCGAGTATTGC GCAGGGATGTGTCTCGCCTGCGCGCGTGGGGTTGGTATCTGATGGGCTGCCGAGATGGTGCTCGCTGGTTGCCTGCTGTG CAGTGGTTGGCCCGTGTGTTGTCTGTGTTCGTGATGCCGCAACGGCACCGTTCACGGCGGCGCCAGCCTTTGCGTGCTAT GCGCCACCTATCCAGTTATAGCTTAGTCGAGCGGGCCTATGCGGCGTTGGAGGATGATATCCAGGGGCGGTTGCTGACGT TGCGTCTGGCGCAGGGTGAACGGCCCACCGGTCTGAGGTCTCGTCAGATTACGATGCTGGAGCGCCAAGTAGATGAGGCC GTGCGGTTGCGTTTGTGTGGCCTGCCGCAAGCCCGTCAGATGACGGTGATCTGTCATCTGCTGGCGTGGGCCATGGCTTT GCGTTCCTGCCTCGGACTACGATTGCCGTTGGCGGACAGGGTGAGGCGTTGA
Upstream 100 bases:
>100_bases TACAGTTAGCGTTGCCGGGCTGAACCGGTTTCACAACCTGATCCGGCGTCCATTTTTATGCATTGCAGGTAGGTAGTAGC CAATGCAGGAGTTGCAGCTT
Downstream 100 bases:
>100_bases TGCAGGATATGTCGATGTTGTCTCCAGCGTTGGACACTCTGCCTCGGGTATTTACCCTCTCTGATCTTAAGCAGCTGCAG CCAGAGGAGTCTGAGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MRTQQVAGKPRQQELELEAVRTRLQALQEYLAVYRASFASSGSADSYARVRVLRRDVSRLRAWGWYLMGCRDGARWLPAV QWLARVLSVFVMPQRHRSRRRQPLRAMRHLSSYSLVERAYAALEDDIQGRLLTLRLAQGERPTGLRSRQITMLERQVDEA VRLRLCGLPQARQMTVICHLLAWAMALRSCLGLRLPLADRVRR
Sequences:
>Translated_203_residues MRTQQVAGKPRQQELELEAVRTRLQALQEYLAVYRASFASSGSADSYARVRVLRRDVSRLRAWGWYLMGCRDGARWLPAV QWLARVLSVFVMPQRHRSRRRQPLRAMRHLSSYSLVERAYAALEDDIQGRLLTLRLAQGERPTGLRSRQITMLERQVDEA VRLRLCGLPQARQMTVICHLLAWAMALRSCLGLRLPLADRVRR >Mature_203_residues MRTQQVAGKPRQQELELEAVRTRLQALQEYLAVYRASFASSGSADSYARVRVLRRDVSRLRAWGWYLMGCRDGARWLPAV QWLARVLSVFVMPQRHRSRRRQPLRAMRHLSSYSLVERAYAALEDDIQGRLLTLRLAQGERPTGLRSRQITMLERQVDEA VRLRLCGLPQARQMTVICHLLAWAMALRSCLGLRLPLADRVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23564; Mature: 23564
Theoretical pI: Translated: 12.03; Mature: 12.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTQQVAGKPRQQELELEAVRTRLQALQEYLAVYRASFASSGSADSYARVRVLRRDVSRL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH RAWGWYLMGCRDGARWLPAVQWLARVLSVFVMPQRHRSRRRQPLRAMRHLSSYSLVERAY HHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AALEDDIQGRLLTLRLAQGERPTGLRSRQITMLERQVDEAVRLRLCGLPQARQMTVICHL HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LAWAMALRSCLGLRLPLADRVRR HHHHHHHHHHHCCCCCHHHHHCC >Mature Secondary Structure MRTQQVAGKPRQQELELEAVRTRLQALQEYLAVYRASFASSGSADSYARVRVLRRDVSRL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH RAWGWYLMGCRDGARWLPAVQWLARVLSVFVMPQRHRSRRRQPLRAMRHLSSYSLVERAY HHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AALEDDIQGRLLTLRLAQGERPTGLRSRQITMLERQVDEAVRLRLCGLPQARQMTVICHL HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LAWAMALRSCLGLRLPLADRVRR HHHHHHHHHHHCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA