Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835409

Identifier: 110835409

GI number: 110835409

Start: 2889737

End: 2890297

Strand: Reverse

Name: 110835409

Synonym: ABO_2548

Alternate gene names: NA

Gene position: 2890297-2889737 (Counterclockwise)

Preceding gene: 110835410

Following gene: 110835408

Centisome position: 92.63

GC content: 54.9

Gene sequence:

>561_bases
ATGAGAACCATTATCATAAATAATGGTTTTTCTTATGTTGGTTGCCGTTCTCGCCACATTTGCCAGTGTGGCGCTGTTTT
ATCTGTCCGACCGACAGCAGCGCTGGCTGGATCAACCTCTCCCTGCCTTTACTCGCTTGATCGCTTTGGCCATGTTGGCC
GGCGGGCTGCTGCTGTTCACCCTGCAATTGGGGGTCAGCGTGGGCCTGTTTGTAGGGTTGTGGGTATCCACATTACCGGC
GCTGCTGGTGCCCTTGATAGTGAGTCATTATCGAGACCGTTATCAGCGCCGGGGTGGAAGCCGATGAGAGCTTTTTGGGC
ATTTGTATTCAGTTTGCCGCTGTCAGCAATGCTGATGGGGTTGCTGGCGGCATTGGTGCCGGTTCCTTGGCAATCTTGGT
TGGTGTTGCAGTTGTTGGGGATAATGTTGTTGTGGATGTTGCTGGTGGTTTTGGTGGCAATCCCTGAGCGTACCTGGCCG
CCTTTGGTGGCGCTGTTGGTGATGAACGGGGTTGCCTGGCTAGCGTTGCAGGCAACGGCCCTGTATGGAGGCGGCGCATG
A

Upstream 100 bases:

>100_bases
ACCGCGCGGCTCAGTGAGGCCAGTGACTATCTGCGTAAGTTGCGGCCTCGTTGAGCTCGTCGGCCTTGTTATCTTGACGG
AAGCGACCGCCTGCTATTAA

Downstream 100 bases:

>100_bases
AAGCGGCTCGTTTGCGGCGTTTTATCGATTTACATGCTTGGCTGGGCATGGTCAGTGGGCTGATTCTGTTTGTGGCGTTT
TTTGCTGGCGCTATCAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MRTIIINNGFSYVGCRSRHICQCGAVLSVRPTAALAGSTSPCLYSLDRFGHVGRRAAAVHPAIGGQRGPVCRVVGIHITG
AAGALDSESLSRPLSAPGWKPMRAFWAFVFSLPLSAMLMGLLAALVPVPWQSWLVLQLLGIMLLWMLLVVLVAIPERTWP
PLVALLVMNGVAWLALQATALYGGGA

Sequences:

>Translated_186_residues
MRTIIINNGFSYVGCRSRHICQCGAVLSVRPTAALAGSTSPCLYSLDRFGHVGRRAAAVHPAIGGQRGPVCRVVGIHITG
AAGALDSESLSRPLSAPGWKPMRAFWAFVFSLPLSAMLMGLLAALVPVPWQSWLVLQLLGIMLLWMLLVVLVAIPERTWP
PLVALLVMNGVAWLALQATALYGGGA
>Mature_186_residues
MRTIIINNGFSYVGCRSRHICQCGAVLSVRPTAALAGSTSPCLYSLDRFGHVGRRAAAVHPAIGGQRGPVCRVVGIHITG
AAGALDSESLSRPLSAPGWKPMRAFWAFVFSLPLSAMLMGLLAALVPVPWQSWLVLQLLGIMLLWMLLVVLVAIPERTWP
PLVALLVMNGVAWLALQATALYGGGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19766; Mature: 19766

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTIIINNGFSYVGCRSRHICQCGAVLSVRPTAALAGSTSPCLYSLDRFGHVGRRAAAVH
CEEEEEECCCCEECCCCCCHHHHCCEEEECCCHHHCCCCCHHHHHHHHHHHHCCHHHHCC
PAIGGQRGPVCRVVGIHITGAAGALDSESLSRPLSAPGWKPMRAFWAFVFSLPLSAMLMG
CCCCCCCCCEEEEEEEEEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LLAALVPVPWQSWLVLQLLGIMLLWMLLVVLVAIPERTWPPLVALLVMNGVAWLALQATA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LYGGGA
HCCCCC
>Mature Secondary Structure
MRTIIINNGFSYVGCRSRHICQCGAVLSVRPTAALAGSTSPCLYSLDRFGHVGRRAAAVH
CEEEEEECCCCEECCCCCCHHHHCCEEEECCCHHHCCCCCHHHHHHHHHHHHCCHHHHCC
PAIGGQRGPVCRVVGIHITGAAGALDSESLSRPLSAPGWKPMRAFWAFVFSLPLSAMLMG
CCCCCCCCCEEEEEEEEEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LLAALVPVPWQSWLVLQLLGIMLLWMLLVVLVAIPERTWPPLVALLVMNGVAWLALQATA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LYGGGA
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA